Pecten maximus (king scallop): 117316752
Help
Entry
117316752 CDS
T07399
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit Sen2-like
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmax03016
]
117316752
Enzymes [BR:
pmax01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
117316752
Transfer RNA biogenesis [BR:
pmax03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
117316752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
117316752
NCBI-ProteinID:
XP_033727406
LinkDB
All DBs
Position
18:15008438..15018318
Genome browser
AA seq
602 aa
AA seq
DB search
MSTRIGNPRKKRRVYVNREPPFPVPIATISGETANDKTWFYYTGELHGNHVAVKHSGDID
FLYKMGFFGKGSLSKSKPDFTSRSKSVDIQNVSGETTTVKLTKRRSYIRHMKWRKLEKQY
AGSEISANDLVEYDSSVEVETLDEKMSTKITVLDSQDDKEIDQHPSPHRTLPAGPTVAAT
WEDTDEDFWASPAENRKKNFQTTEMGDWAETDEDFWGCASSSEGKPIDNENTVKVGSDIR
SSPFKKEGVDVDVVMMKTESRLHDNNKPVESESRLCDNNKSVENESRLCDGGNNVRLESE
SISTKPGINEFNENHSDPLPLDRRKQIDENNFRNGTRESNDQSNMNNQGFDGQVFTSSHD
DQETSEILETNRPLDRLCEEEEDEGDELVIEDSDSETEGRYRKISGRKWLPVLKKDAYPM
KEFLHLSLEEAFFLSFGLGCLIVTDNEKTLDLQSLWTRFCETQQDFLPNYVVYHYFRSLG
WVPKSGLKFGTDFILYKVGPPFYHGSYSVVVKMIDEEEMHVVPEVAGVKGRDFSWISLAG
LNRITEHVAKELMLCYVIKPKGLTMEEMKSPRCLSKFKVQQIAVNRWIPSQERQEKVVEE
MP
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtctacacgtattggaaatccacgcaaaaaacggagggtttatgttaaccgtgaacca
ccttttcctgttcccatagcaactatttcaggggagactgccaatgacaaaacatggttt
tactacacaggagagctccatggtaaccatgtggcagtcaaacattcaggggatattgat
ttcttatacaagatgggtttctttggaaaaggctctttgtccaaaagtaaaccagatttt
acctcgcgttcaaagtctgtggacattcaaaacgtgtcaggggagacaactacggttaaa
ctgacaaaaagaagaagttacatccgtcacatgaagtggagaaagttggaaaaacaatat
gctggtagtgaaatatccgccaatgaccttgtagaatatgacagttctgtggaagtcgag
accctagacgaaaagatgagcaccaaaattacagttcttgattctcaagatgataaggaa
atcgatcaacatcccagtccacacaggacacttcctgcagggccaactgtagctgcaacc
tgggaagacactgatgaggatttctgggcatctcctgcagagaatcgtaagaaaaatttc
caaaccactgaaatgggagactgggcagaaacagatgaagatttctgggggtgtgcttct
tcaagtgaaggaaaacctattgataatgaaaacactgttaaagttggaagtgacattaga
agttccccattcaaaaaagaaggtgtagatgttgatgttgtaatgatgaagactgaaagt
agattacatgacaataataaaccagtggaaagtgaaagcagattatgtgacaataataaa
tcagtggaaaatgaaagtagattatgtgatggtggtaataatgtaagactggaaagtgaa
agtataagtacaaaacctggtataaatgagttcaatgaaaaccattctgaccctttacca
ttagataggcggaaacagatagatgaaaataattttagaaatggaactcgagaatcaaat
gatcaatctaatatgaataatcaaggatttgatggacaagtttttacatcatctcatgat
gaccaagaaacatcagaaatattggaaacgaatcgtccgctagatcgactttgtgaggaa
gaagaggatgaaggagatgagcttgtcattgaagactcggacagcgagactgaagggcga
tatagaaaaatctcaggacggaaatggcttccagtgttaaagaaagatgcttacccaatg
aaggaattccttcatctcagccttgaggaggctttcttcctcagctttggtttgggctgc
cttattgtgacagacaacgagaagacactagatctacaatcgctgtggacgaggttctgt
gaaactcaacaagacttccttcccaactatgttgtataccactacttcaggagtctggga
tgggtgccaaagtcggggctcaagtttggcaccgactttattctctacaaagttggtccg
ccattttatcacggtagctattctgtagtagtcaagatgatcgatgaagaggaaatgcac
gtcgtaccagaggtagcaggggtcaaaggtcgtgacttttcctggatctctttagcagga
cttaatcgaatcacagaacatgttgcgaaggaactgatgctatgctatgtcattaaaccg
aagggcctcacaatggaggagatgaaatctcctagatgtctatccaagtttaaagtacag
caaatagcagtcaacaggtggatcccatcacaagaacgacaagagaaggtggtagaagaa
atgccttaa
DBGET
integrated database retrieval system
