Pecten maximus (king scallop): 117321640
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Entry
117321640 CDS
T07399
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic dynein 1 intermediate chain 2-like
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax04145
Phagosome
pmax04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117321640
09142 Cell motility
04814 Motor proteins
117321640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmax03036
]
117321640
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmax04812
]
117321640
Chromosome and associated proteins [BR:
pmax03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
117321640
Cytoskeleton proteins [BR:
pmax04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
117321640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Dynein_IC2
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
117321640
NCBI-ProteinID:
XP_033732030
LinkDB
All DBs
Position
2:complement(25939788..25967866)
Genome browser
AA seq
677 aa
AA seq
DB search
MSDRKAELERKKARLEQMRKERQEKDRIKKLKETPDENVQKKAPTGDIHKETEDLLRDLG
IPPAGAPSAAAPSEAVKANSGQTDQESGAPQPPQTLSVRPKMKLSVTKVSETSIPPRENV
VYSKETQTTTVEPLDKEGHRHGVRGPWDYYDDISDAGSSPKRGQGPGSRGGSSRYSSPRH
GSPKFIYHDLEWEDEFFDDDEDDDADSMDVTEHSPSHKMPHVEMVPPSKTLEDDKKEDKP
LPELSEEEKKQAMMSEDFQIFFDHTTRIIERALCESVDIFMDYTGGDGEGKDDDLAGERL
KLNREFYDERWSKHRTITSMDWSKQHPELLVASYNTNEDAPHDPDGVALVWNVKFKKQTP
EYIFHCQSAVMSSCFAEFHPNLVVGGTYSGQIVLWDNRVNKRTPVQRTPLSAAAHTHPVY
CVNVVGTQNAHNLISVSTDGKMCSWSLDMLSQPQDSMELQHKQSKAVAVTSFSFLANDVN
NFVVGSEDCTVYTACRHGSKAGISEAFEGHQGPITGINCHSVPGQIDFSPYFLTSSFDWT
IKLWSIKDSKFIHSFEDNSDYVYDVQWSPVHPALFASVDGMGRLDLWHLNNDTEVPTATV
VMENNVALNRCRWHQTGAHIATGDDLGHIYIYDVAETIATPKHDEWSRFAHTLHELKQHA
AEREEESSLATMTSPLR
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaggaaagcagagctcgagcgcaaaaaggctaggctcgaacagatgcgcaag
gaaagacaagagaaagacagaattaaaaagcttaaagagacaccagatgaaaatgtacaa
aagaaagctccaacaggagatattcacaaagaaacagaagatctgctgagagatctaggg
atacctcctgctggtgctccctcagctgctgcacccagtgaagcagtgaaggctaattca
ggacagacagatcaagaatcaggggcaccacaacctccacagacattgtcagtgagacca
aaaatgaaactgagtgtaacgaaagtatcagaaacaagcatcccgcctcgtgaaaatgtt
gtgtacagcaaagaaactcagacaaccactgttgagcccctagataaggaaggacacagg
catggtgtgagagggccatgggattattacgatgatatttcagacgcaggtagcagtcca
aagcgtggccaggggcctggtagtaggggtgggtcgtcgcgatatagctctcctcgacat
ggttcacccaaatttatttatcacgatttggaatgggaggacgagttttttgatgatgat
gaagatgatgatgccgactcaatggatgtaacagaacactccccgagccacaagatgcca
catgttgagatggtgccgccctccaagacactagaggatgacaagaaggaggacaaaccc
ttaccagagttaagtgaggaggagaaaaagcaggcaatgatgtccgaagactttcagata
ttttttgaccacacaacacgcatcattgagcgtgcgctttgtgaaagtgttgatatcttc
atggactacaccggaggagatggggagggcaaagatgatgacctggctggagagagactg
aagctgaacagggagttctatgatgaaagatggtccaagcacagaacaatcaccagcatg
gactggtcaaaacagcaccctgagttactggtagcctcttacaatacaaatgaagatgca
ccccatgatcctgatggagtggcactagtgtggaatgtcaagtttaaaaaacagacacca
gaatacatttttcactgccagtcagcagtgatgtcgagctgttttgcggagttccatcct
aacttggttgtgggtggtacatactctggacaaattgtactatgggacaatcgagtcaac
aagaggacccctgtacagagaactccactgtctgctgcagctcacacgcatccagtttac
tgtgttaatgtggtgggaacacagaacgctcacaacctcatcagtgtgtccacggacggc
aagatgtgttcctggagtctggatatgttgtcacaaccacaggacagtatggaactccag
cacaagcagagtaaagcggttgcagtgacttcattttctttcctggccaatgatgtcaat
aactttgtggttgggagtgaggattgtactgtatacacagcctgtaggcatggaagtaag
gctggtatcagtgaggcgtttgagggacaccagggtcccattactggcattaactgtcac
tccgtacccggccagatagacttctctccgtacttcctcacatcctcttttgattggacg
atcaagctgtggagtataaaagattccaagtttatccattcgtttgaggacaacagcgac
tatgtttatgatgtacagtggtcaccagtccatccagctttgtttgccagtgtggacggt
atgggacgcctggacttgtggcaccttaataacgatactgaggtacccactgccacagtt
gtcatggagaataatgttgcactgaaccgttgtcgatggcaccagacaggtgcccacata
gccactggggatgatctaggacatatatacatctatgatgtggcagagaccattgcaaca
ccaaagcatgatgaatggtcacgatttgcacacactctacacgaacttaaacaacacgct
gctgagagagaggaggagtcttccttagcaaccatgacatcacctttacgatga
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