Pecten maximus (king scallop): 117334415
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Entry
117334415 CDS
T07399
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117334415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117334415
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
117334415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_17
TPR_14
TPR_16
TPR_1
TPR_CcmH_CycH
TPR_11
TPR_8
TPR_12
TPR_9
ANAPC3
TPR_7
TPR_6
TOM20_plant
ARM_TT21_C
TPR_30
Motif
Other DBs
NCBI-GeneID:
117334415
NCBI-ProteinID:
XP_033749913
LinkDB
All DBs
Position
9:complement(37511665..37558015)
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AA seq
1533 aa
AA seq
DB search
MDSKEVKATLKNAREAIRNKEYKEALKHCKSVLAWDKNNYNALVFVGVAAEGLDQVDQAV
KAYKRAIESAPGQALAWQGLAGLYEKRPSPEHETDLISVYQKLQEIHGSEEEKKRDILVK
LAKLYIRLGELERGLQIYEEVIEGEKDSARRKHLQTDLVDILMAERSLTTQHEHMVMELV
AMLTREETTVTFTQPELLVTRYLDLLIKHCKVNGLLINVVAYSLCSQHFLIRWKSSSYTT
WKQTQIYNFLETTVNKLKDLEPESPYLVAAQGYILLHQKNYVQARPLLASAAEVLKRVVV
VHYCLAKTLLSLHINKQAQKVCTTCFSLILKKDRVVISGGDLDSRLSGLRCHIDYRIGTP
TALDRAIQTLSQGGNLSSELKVLLGFIYLKASRVEEAQKLVVGTKDTATLDGWIHFVRGD
YSGAILRLTLAVESAPDISENHLMLGKAFWEMWKKEKSKELGEKSYMSFLKAAKLDPYNS
EVFLYLGHFSLDVQQDKVKATKCYQKAFDLDIDNDDAGAALCDLLSSAGQEEDAHKIIVS
VTSKASAGSAKWAWLRLGLYQVKYDSPSVAITSFQSALRADPKDNHVWECLAEAYLHRGS
LTAALKAFTKASELAPNSLYCLYQIAAIKQMLCMYTEAIVEYKVILERSPNYVPALKGVG
ETYLLLARNHLSQSFHGRARENCEDALLFLTRAANHRADMSCLWKLMGDACTLVHSLAPE
TFRFTVDNKLVSRAGETCPPGTSRINLLQTLELGARCYGRALKALSDCASLWHDLGVNFF
YQSQQSAQTDVIARLSTKAVNSLKKALTIDPKNHLHWNALGRVFCSKGCYSPDKAQHCFI
KSIQAEPNNVVAWSNLATLYFKNGNIELAHDAFKTAQSLEPSYVACWIGQALIAETVGHE
DAMDLFRHTNELANHVEGATGYASWVCSMLKDKSKHNTELFRYSIKQMAAIPAASDALAK
YLDLDKTNPTAYNMYGLLLEHQGLYKMAARSLKSALELCDDASPHDEEIRINYARILCKD
QRYLEAGVQYDLVADIVTLEDMCNKGLALYKAGRYSDSVTVYTAALALAETEEEQSHVSV
AMGMVHYREGDLETTKSVLFQSSQMTPPSRMGLLALCALGIIQTDMTLTLAVLQELLVGA
GSTSQSDIAHLMSSANAVIEGNPRAAKNFVQQCIHKYPDQVDLWRLLGSVLVTHCHESIA
VAGAATCVQKVHSLNPTLPGIMKLVTSAQLAGGHHSQTRRNGVLSSAQRAVHLNPDQMDN
WCNLTAAIHSHTVFHNRNADRLTQLALVYLNWISSTFTEASTTLTNWCKRQRVISLVGAG
RVDEAEALLCQLKSCADPDLEDFARITEAVMNGDIGAMSEQLLKSRDNPFLLEALLETCE
QEGVSVNLSEILGEDQEGRGRRIDLVCKVLHVYYIYKQAKRTGVQDGVEGMLKKPVTEVQ
KLDSHCLPVMLVLATACLTANPRLAKHCVVKVSEGRHLQIDKGDEVSIARCLLIKLIYNP
NKESEALKKLLAEAAEEEDVIVLDFYNVLSSHK
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaaagaagtgaaagcgacattgaaaaatgcgagagaggccatccgaaataaa
gagtacaaggaagcattgaaacattgcaagtctgttttagcctgggacaagaacaactac
aatgctttggtttttgtgggtgttgctgccgagggattggaccaggttgatcaggcggtg
aaggcatataaaagggctatagaatctgcccctggtcaggccctagcctggcagggattg
gcaggtctctatgagaaaagaccatcaccagaacatgagactgacttgatcagtgtttat
cagaagttgcaggaaatacacggcagtgaagaggagaagaaacgagatattctggtgaaa
cttgctaagctgtacatcagactgggggagctagaacggggattacagatatatgaggag
gtaattgaaggggaaaaagattcagccagaagaaaacaccttcaaactgacttggtggat
attcttatggcagagagaagtttgacaactcaacatgaacacatggtgatggagctggtt
gccatgctaacacgagaggagacaacagtgaccttcacacaaccagaactcttggtcact
cggtacctggaccttcttatcaagcactgtaaggtaaatggcctcctgatcaatgtggtc
gcctacagtctatgttcccagcactttcttatccgttggaaatcctcatcatacaccaca
tggaaacaaacacagatatacaacttcctggagactactgtcaacaagttgaaggacctt
gagccagagagcccttatcttgttgctgcccagggctacatattgttgcatcagaaaaac
tacgtgcaggctcgaccattgcttgcttcagctgccgaggtcctgaagagagtcgttgtt
gtacattactgcctagccaagactttgttatcactacacattaataaacaggctcagaaa
gtttgtactacctgttttagtctgatactcaagaaggaccgggttgtaatatcaggtggt
gacctggactcacgattgtctgggctacgttgtcacatagactacaggataggaacaccg
actgctctggacagggccatccaaacactttctcagggaggaaatctgtccagtgagctg
aaggttttactagggtttatttatctgaaggccagcagagttgaagaagcccagaaattg
gtggttgggaccaaggacaccgccactctagatggatggatacatttcgtcaggggagac
tactctggggctatcctcaggttaacactggccgtggaatctgctccagacataagtgaa
aaccacctcatgctgggtaaagcattttgggaaatgtggaaaaaggagaaatccaaggag
ttgggagagaagagctacatgtcatttctaaaggctgccaagctggacccgtacaacagt
gaggtattcttgtatctgggtcacttttccttggatgtccagcaagacaaggtcaaggcc
acaaagtgttatcagaaggcatttgaccttgacattgacaatgatgatgctggtgcagcc
ctctgtgatcttttgtccagtgcaggtcaggaggaagatgcccataaaatcatcgtctct
gtcacatctaaagctagcgcaggaagtgccaagtgggcgtggcttcggttggggctgtac
caagtcaagtatgacagtccttctgtggccatcaccagcttccagtcagcactgagggct
gaccctaaagacaaccatgtttgggagtgtctggctgaagcctacctacacagaggcagt
ctaacggcagctctcaaggccttcaccaaggcttcagagctggctcccaactccctgtac
tgtctgtatcaaatcgctgctataaagcagatgctatgcatgtacacggaggccattgtg
gagtacaaggttatcctggaacgctcaccaaactacgtaccagctttgaagggtgttgga
gagacttatctattactggctaggaatcacctgtcccagagtttccatgggcgtgcccga
gaaaattgtgaggatgctctgcttttcctcaccagggcagcgaaccaccgtgcggacatg
tcctgtctgtggaagttgatgggcgatgcctgtacactggtccatagtctggcaccggag
accttcaggttcactgtggacaataaactggtgtccagggcaggggaaacctgtccccca
gggacatctagaataaatcttctacagaccctggaacttggggctaggtgttatggccga
gctttaaaggccctttcagattgtgcctcattatggcatgaccttggagtcaatttcttc
taccaatcacagcagtcggcacaaactgacgtcattgccagactgtccactaaagccgta
aattccttgaagaaagccttgacaattgatcctaagaaccatctacactggaatgctcta
ggaagggtattctgttcaaaaggatgttactcaccagataaggcccagcactgctttatc
aagtccatacaggctgaaccaaataatgtagtggcttggtctaatttggcaacactttat
ttcaagaatggcaatatagagcttgcccacgatgccttcaagaccgctcagagtttagag
ccatcctatgttgcctgctggattggacaggcactgattgcagagacagttggacatgaa
gatgccatggacttgttcagacacaccaatgaactagccaatcacgtagagggagccact
gggtatgccagctgggtgtgttctatgctgaaggacaagagtaaacacaacacagagttg
ttccgatactcaataaagcaaatggcagccataccagcagcctcggacgctcttgccaaa
tatctagatcttgacaagaccaatcccactgcttacaacatgtatggattactactggaa
caccaaggtttatacaagatggctgcccgatctctcaaatctgctctagagctgtgtgat
gatgcctcaccccatgatgaggaaattaggatcaactatgctcgcatactgtgtaaagat
cagcggtacctagaagcgggagtgcagtatgaccttgtggctgacattgtgaccttggag
gacatgtgtaacaaaggtctggccctgtacaaggctggtcggtactctgacagtgttaca
gtatacacggccgccctggctctagctgaaacggaggaagaacagtcacatgtatctgtt
gccatgggaatggtccactatcgggaaggagatcttgagacaacaaagtcagtcctcttc
cagagttcccaaatgactccaccctcaaggatgggtctactggcattgtgtgctcttggg
ataattcaaacagacatgaccttgaccttggctgtccttcaggaacttttggtgggagcc
gggtcgaccagtcagtcggacatagctcacctcatgtcgtctgccaatgctgttattgag
ggcaatccacgggcagctaagaactttgtccagcagtgtatccataaatatccagaccag
gtggacctgtggcgcctcctggggtctgtccttgtcactcattgtcatgaatccattgca
gtggctggtgctgccacctgtgtacagaaagtccattcattaaacccaacactacctggt
ataatgaagctagttaccagtgctcagttagcaggtggacaccacagtcagacccgcaga
aatggggtattatccagtgctcaaagggcagtacatctaaacccagatcagatggacaac
tggtgtaacttgacagcggccatccacagccatactgtattccacaatcgcaatgcagac
agacttactcaacttgcccttgtgtacctgaactggatctcttcaacatttacagaagct
tcaaccactttgacaaattggtgtaaaagacaaagagttatttcccttgttggagctggt
agagtagacgaagcagaagccttactatgccagttaaagagctgtgcagatccagatctg
gaagattttgccaggatcacagaagctgtgatgaatggagacattggggccatgtcggaa
cagttactcaagtcacgagacaacccatttctcctggaggctttgttggagacatgtgag
caggaaggggtcagtgtgaacctaagtgaaatattaggagaggaccaggaaggcagagga
aggagaatcgacctggtgtgcaaagtactacatgtttactacatttacaaacaggccaag
aggactggtgttcaggatggtgttgagggaatgttgaagaagccagtgacagaggtacaa
aaactggattcccactgtctcccagtgatgctggtcctggctacagcctgtctgacagcg
aaccccagactggccaagcactgtgttgttaaagtgagtgagggaagacatttacaaatt
gataagggtgatgaagtgtccatagcgagatgtctcctcatcaaacttatatacaaccct
aacaaggagtctgaagctctcaagaaactgttggcagaggcagcagaggaggaggatgtg
attgtcctggacttctacaatgttctctccagccataagtga
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integrated database retrieval system
