Pecten maximus (king scallop): 117345349
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Entry
117345349 CDS
T07399
Name
(RefSeq) protein smg8-like
KO
K18734
protein SMG8
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117345349
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
117345349
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
117345349
NCBI-ProteinID:
XP_033764309
LinkDB
All DBs
Position
16:complement(21990664..22032083)
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AA seq
1007 aa
AA seq
DB search
MAAPLGVLSFPLELDPHTIPNKDKKVVVVSIIGKSELCGFASKASILNPLLEKDVFKCVP
EAQKSNTEKGDVECYYDNEGQAVYLHHRSLYDVHRLATLCQRLVEAESTQDLFSLWQKDE
YKSTKTLLWMFSVSHIVLLSHPGSSFDISYVRMFRTLDTIRLKLQHCVTEQLQGLPVSKD
WYHSGRPCSPRVLFIFNKSGKHEALSDDNDTGTISKKSSLARKSQHSMEDQIYRILRKSR
VITNISNNSLFAVPANQEFVFLHGHQPEVTDPVQLYLQQLRSNSTLNKDSDSPRSYQANR
RSAQSGPQDATRSSSRTQRSGSCSNFKEFLSHHIETALGRGFDDNVGRNPVPPIFDVPSC
QTWFNVSSKLYNFFFGGTVSGKAQATFNTLKSLLETDIRFSENRCNKVLPLAEAAYQEGL
PTHYITNFHLTKLAQAHRVFYQFARGPACEKYLKQLEAACEKYWKNGHQLCEEVSLTGNH
CVNPLHRLPEEAEMEDNAHLPVMSHSSQMKTKAVCNCGRKQADKDDPFDHKAANFDFYDA
LEKLCCVELQHIEMPVFQPSTTEVRACQLLTTPDSKTVNKDTGAKQDIISGMTNLSLALS
LGQSGASDYFGHHEGTNGGSLTTEDLPSKTPDQQCETGTSDHLEEVISKTPDHQQGGTGT
SDHDEVTKEGAVSGNQKETAKSGETAADVVKEVGDSPVVQQSEEVEQRETTAAPQDDLAD
LGSEHIDHTSDPVTDLPTCTVEEVKDITMSESELMALRQHSTTEYLPGMLHSESPLGLLP
KFPSWALTCLGKSTLYSHTLGLELPGFLHGSNYLLPWDITAKIEKEKWPSVGEMASRKGK
QKKISPKDVGELNVRVFLGDEYECPRGHRFFCSGPEKIIKVSNTSTVKDNATKLVNLDMP
LYCSCPHCRSSKGYMAQLMRLYIVTPDSPLRITLCPQIQPAPPPCPQFGLGLDGPVELPP
GGLWCLRIPHVYMGDAGPYTMPSDPQSLQHCHMLKGVFNYKVSSPDS
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccttaggagtgttgtcgtttccattggaactggatccccacactatccca
aacaaggacaagaaggtggtagtggtctccattattggtaagagtgaactatgtgggttt
gcctccaaagcctccatcctcaacccgctgttggagaaggatgtattcaagtgtgtacca
gaggcccagaaatcaaatacagaaaaaggagatgtggaatgctactatgacaatgagggt
caggctgtgtacctccatcatcgtagtctttatgatgtccaccgactagccacattgtgt
caaagactggtagaagctgagtccacacaggacctattctcactctggcaaaaggacgag
tacaagagcactaaaactctactgtggatgtttagtgtgtcccatattgtcttgctttca
catcctgggtcatcgtttgacatcagctatgtccggatgtttaggacacttgacaccata
agattgaagttacagcattgtgtgacagaacagttacagggcctgcctgtatccaaggac
tggtaccactctgggcgaccatgttccccacgtgtcttgttcatctttaacaagtcaggc
aaacatgaagcactctctgatgataacgatactggaacaatcagtaaaaaatcatctcta
gcacgtaaatcccagcacagcatggaggatcagatataccgcatcctgcgtaagtctaga
gtcatcactaatatcagtaacaactcactgtttgcggtgccagctaaccaggagtttgtg
ttcctacatggccaccagcctgaggtaacagacccagtccagctgtacttacaacagctc
agaagtaacagcacactcaacaaagactcagattctcccagaagttatcaggccaatagg
aggtcagcacagtctggtccacaagacgccacaaggtcgtcgtcacggacacagagatca
ggcagctgctccaattttaaagaattcctgtcccaccacatagagacagcattgggacgt
ggctttgatgacaacgtgggacgtaaccctgtcccacccatctttgatgtgccaagttgc
cagacctggttcaatgtttcttcaaaactctataacttcttcttcgggggtactgtcagt
ggaaaggcacaggctacatttaacaccctcaaaagtcttctggagacggatatacgcttc
tccgaaaaccggtgtaacaaggttctacccctggctgaggcggcgtaccaggagggtcta
cctactcactacatcaccaacttccacctgaccaagttagcccaggctcaccgtgtattt
taccaatttgcccgaggccctgcatgtgaaaagtaccttaaacagttagaagctgcctgt
gaaaaatactggaaaaatggccaccagctgtgtgaggaagtcagtctcacagggaaccat
tgtgtgaacccattacatcgacttcccgaggaggcggagatggaggataatgcacatcta
cctgtgatgtctcactccagccaaatgaagaccaaggcagtgtgtaactgtggacgtaag
caagccgacaaggatgacccgtttgaccacaaggcagcaaactttgacttttatgatgcc
ctggagaagttgtgttgtgttgaactgcaacatattgagatgccagtgtttcagccaagt
accacagaggtacgggcgtgtcagctcctgaccacacccgacagtaaaacggtcaacaag
gatacaggagccaagcaggacatcatctccggaatgaccaacctgagtctggctctcagt
ctaggtcaatctggtgcaagcgactattttggtcatcatgaaggaaccaatggaggcagt
ttaaccacagaggacttaccatcgaagacacctgatcagcagtgcgagacaggtacgagt
gaccacttggaggaagtgattagtaaaacacctgatcatcaacagggcggaaccggaaca
agtgaccatgatgaggtaaccaaggaaggggctgtaagtggaaaccaaaaggagacagct
aaatctggagaaacagcagctgatgtagtgaaggaggtaggggattccccagtggtccaa
cagagtgaagaggtggaacaaagggagacaactgcagctccacaggatgacctggctgat
ttagggagtgaacacattgaccatacatcagatcctgtcacagatttaccaacctgtaca
gtggaggaggtgaaggacatcaccatgtcggagtctgaactgatggccctgcgacaacac
tctacaacagaatacctgcctgggatgcttcactccgagtcacctctcggcctgcttcca
aagttcccctcctgggcgctgacctgtcttggcaagagcactctgtactcccacacatta
ggtttagagttacctggtttcctgcatggaagtaattatctcctaccctgggatatcact
gctaaaattgaaaaggaaaaatggccgtctgtcggggagatggcatcaaggaagggcaaa
cagaagaaaataagtcctaaagatgttggcgagttgaatgtccgtgtgttcctgggagat
gaatatgaatgtccacgtggtcatcggtttttctgtagtggccctgagaaaataatcaag
gtctccaatacaagtactgtcaaggacaacgccaccaaactggtgaacctagacatgcca
ctctactgttcctgcccccactgtaggagttccaagggctacatggctcagctgatgcga
ctctatatcgtgaccccagacagccccctcagaatcaccctctgtccccagatacagcca
gcacccccgccctgcccccagtttggcctcggccttgatggacctgtggaactgccccct
ggtggactctggtgtctgcgtataccacacgtatacatgggtgatgcaggtccatacacg
atgccctctgacccccagagtctacaacactgtcacatgctgaagggggtgtttaactac
aaagtttcctccccagactcctga
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