Glacieibacterium megasporae: KTC28_08790
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Entry
KTC28_08790 CDS
T08573
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pmea
Glacieibacterium megasporae
Pathway
pmea03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmea00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KTC28_08790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmea03021
]
KTC28_08790
03400 DNA repair and recombination proteins [BR:
pmea03400
]
KTC28_08790
Enzymes [BR:
pmea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KTC28_08790
Transcription machinery [BR:
pmea03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KTC28_08790
DNA repair and recombination proteins [BR:
pmea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KTC28_08790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
UAJ11734
LinkDB
All DBs
Position
1851313..1852374
Genome browser
AA seq
353 aa
AA seq
DB search
MAVIAKNWTELKKPNTLETRPSSDHRRKGTFVAEPLERGFGLTLGNALRRVLLSSLQGAA
VTAIKMDGVLHEFSSLAGVREDVTDIVLNIKQIAIRMQGDQPKRINLTATGPGAVTAGQI
TVSGDMEVMNPELMICTLDEGATLNMELTVEAGKGYVPASMNRPADAPIGLVPVDALYSP
VRQVSYKVENTRVGQELDYDKLTMSVETDGTLTPDDALAYAAKILQDQLALFVNFEEPAH
GHPVATSGGTAMPLGPVEIDDTAALNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQK
SESEMLRTPNFGRKSLNEIKEVLSAMGLRLGMEIPGWPPENIEEMAKKLEQEY
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtggccgtgatcgcaaagaactggaccgaactcaagaagccgaacacgctcgagacccgc
ccgagctcggaccatcgccgcaagggcacgttcgttgccgagccgctcgagcgtggcttt
ggcctgacgctcggtaacgcgctgcgtcgcgttctgctgtcgtcgctccagggcgcggcg
gtgaccgcgatcaagatggacggcgtgctccacgagttctcgtcgcttgccggcgttcgc
gaagacgtgaccgacatcgtcctcaatatcaagcagatcgcgatccgcatgcagggcgat
cagcccaagcggatcaatctgacggcgaccggacccggcgcagtcaccgccggccagatc
accgtgtccggggacatggaggtgatgaaccctgagctgatgatctgcaccctcgacgag
ggcgcgacgctcaatatggagctcaccgtcgaagccggtaagggctatgtcccggcgtcg
atgaaccgtccggccgacgcgccgatcggcctcgtccccgtcgacgcgctgtattcgccg
gtccgccaggtgtcgtataaggtcgagaacacccgcgtcgggcaggagctcgactatgat
aagctgacgatgtcggtcgagaccgacggcacgctgactcccgacgatgccctcgcttat
gccgcgaagatcctccaggaccagctcgctctgttcgtcaacttcgaggagcccgcgcac
ggtcacccggtcgcgacgagcggcgggacggcaatgccgcttggcccggtcgagatcgac
gacacggccgcgctcaaccgctacctgctcaagaaggtcgacgagctcgaactgtcggtg
cgttcggcgaactgcctcaagaacgacaacatcatctacattggcgacctcgtccagaag
tccgagagcgagatgctgcggaccccgaacttcggtcgcaagtcgttgaacgaaatcaag
gaagtcctgtcggcgatgggcctgcggctcggcatggaaatccccggctggccgcctgag
aacatcgaagagatggcgaagaagctcgagcaggaatattga
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