Polyergus mexicanus: 138936766
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Entry
138936766 CDS
T10742
Symbol
Not1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pmec Polyergus mexicanus
Pathway
pmec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138936766 (Not1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138936766 (Not1)
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138936766 (Not1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
138936766 (Not1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
138936766
NCBI-ProteinID:
XP_070158491
LinkDB
All DBs
Position
Unknown
AA seq
2408 aa
AA seq
DB search
MNLDSLSFTLSQISYLVANLSKKNYEESCREISVLVQWHGLEADRHFLRCLISCVDFFKS
ELSESSAKDYFQAKLLKQECNSLLSKPSFISNLCFAIDNPLHHQKTLNPSSKFFVDLKKT
LGLTLVQEVAFAIALQHSENTEIRLLALEHTRKQLPELIKNYINSETSNKHHEGGLHDSL
PQVLQLILGQVFHTNNPYNLSIEAKEKFLQNLRRDFPRELVPVVLAPFLYPGDGETPQFK
IEFNMAVNQMDNNTLVELIMELGYSFTSSVDECRSALTGLGAREIPPACVARVLAHMARS
CSNLDDAGGLQSFWGNSAASQDSNKEKPSDSIIPTTWNVEVFIQTLKEMQSTLSWNDVVV
KLDHAEFIIKDRQGLSLLITGLKLGLQHQGYPPDMFPVELFYRHWDNVEGQFSLIQQILK
CPDIFCFADYPYHSVTVDVLKAAPESDSKEGQTWRSLNIVELLLHMAERGLYNSVQEIFK
WPVQHCPDVLVLALLQINPPLTLLRQELFTTLLPIFLGNHPNSAVILHHAWHANNTKIKT
IIMHAMADWYTRGDHDQTRLSRILDVAQDLKALSALLNSQSFPFVIDLACLASRREYLKL
EKWLTDKIRDHGEVFVAACVKFLQRRCPQVMGPGIKEDLTVPKASQLPQETLTTILACLQ
VCAGSVSQELSELIMTMVQNCSLMLSKSTMNRPPPPGVLRHRGLEPFNPATLGSQLFSSK
QVDPLGNLSSSLATMGLGTGLGPPSSSAFNLPGALGPLVSAPGSPSRLMGPSPSPFSILP
LSSQLHSGPVGTQGPSVLPGGTIGGLGRLGPPTGIEKARIPETSNLFPDMGQNVSKEVED
EANSYFQRIYNHPPHPTLSIDEVLDMLKKFQDSGIRREREVFNCMLRNLFEEYRFFPQYP
EKELQITAQLFGGIIERGLVNSYMTLGLALRFVLDALKKPEASKMYYFGITALDRFKSRL
KDYQTYCEHVRTIPHFNEFPQHLIEYIEYGLQGQEPPSRPQGPVLPKTLAAILAPVTTPY
KTMTTTTVTTSTTQAKPSTTPTASLSARPSMPSVANATNIDTLLVATDKEEKITTPPEAL
QDKTAFIFNNLSQLNLQQKCDEIREIVTEEYWPWMAQYLVMKRASIELNFHALYSNFLDC
IKLPEVNKMVTRETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILQIDI
DLKSLLVEAYHKGQQELLYVVPFVAKVLESCAKSRVFRPPNPWTMAIMNVLAELHQEPDL
KLNLKFEIEVLCKNLSIDVGELKPIIYLKDPEKLRNLEYQLSHPNKKSETTSNQQQSQGP
IEELVGATTSGGAVINPQSAPPANTTPSLPTGGAPEPRFNYMDISVTGIANISQHITINN
QLPLFQTHPHLKQFIRPAVERAIQEWIHPVVDRSIKIALTTSEQIVKKDFALDPEELRIR
TAGRNMVRNLTAGMAMITCRDQILASISTNLKQALLTALIGTTPQQKELAEQAANVVAAD
NMELACAFVQKTAIEKAIPEMDKRLLSEMELRKIARQEGRRYCDPLAKYQAERMPEQIRL
KVGGVTPQQMAVYEEFARNIPGFLPLSERDTQVLFMPKPINETPVATFTPNSAVAVATAQ
QVAAYAAAVSNDEVGAMLEKLAAEAEVLLAAVGPAAPPSQHATFHNLLETIILTRRSRDA
GAAMTLLKKAIEGLVDGLVFTNNVMDSEGLLQRYRELNLRILKCLQDPRAYGMQWTNKHV
TRCLTEYREEFRYNFEAIDYLIRSHLISLPQFDVALAQAMEAGSAMATAFAMQLVQLYLI
DERQATHVTETDLFHTIEILARMAHHRTPPEGILLFRLTSLVDSLRANHDSGVLVDRAPA
GPTAHIHSGILQVRARDFDDPPGLMEKTEYLLREWVQMHHSPQHARDPTKAFSIFVHQMN
IHGILKTDDLITRFFKLSTQMCVDLCYRALSETATAPSIMRAKCFHSLDAFVRLVALLVK
HSGDATNTHTKINLLNKVLGIVAGVLLQDHEIRGTDFQQLPYHRIFIMLFLELCAPEPVL
EAVNFQVLTAFCHTLHILRPAKASGFCYAWLELVSHRVFIGRMLAITPQQKCWGMYAQLL
IDLFKYLAPYLRNAELAKPVTSLYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQM
RNLILSAFPRNMRLPDPFTPNLKVDMLQEIAHAPRVLTNFASTIQPLTFKKELDSYLKAR
APVTFLSELRSNLQVSQEAGVRYNIQLMNALVLYVGTQAIAFIRSKGHAPNMSTIAHSAH
MDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTLLYLFAEANTEAIQEQITRV
LLERLIVNRPHPWGLLITFIELIKNPTYKFWSHEFVHCAPEIEKLFESVARSCMVQKQVP
TAETEIPE
NT seq
7227 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttgtcttttactttgtcacaaatcagttatttggttgcgaatttg
agtaagaaaaattacgaggaaagctgtcgagagatatcggttttggtgcagtggcacggt
ctggaagcggatcgacatttcttgcgctgtctgatttcgtgcgttgactttttcaagagt
gagctgtcagagtcgagcgcgaaagattatttccaagcaaagttgctgaaacaagagtgc
aacagtttattgagcaaaccttcttttatatctaatctgtgctttgctatagataatcct
ttacatcatcaaaagacgttgaatccctcttcaaagttttttgtcgatttaaaaaaaact
ctcggcttaaccttggtgcaggaagttgcatttgcgattgcgttacagcattcggaaaac
acagaaatccgtttgttagctttagagcatactcggaagcaattgcctgaattaataaaa
aattatataaactccgagacgagcaacaaacatcacgagggtggtttgcacgattctttg
cctcaagtccttcaattgatactcggccaagtttttcataccaacaatccttataattta
tccatcgaggcgaaagaaaaatttcttcaaaaccttcggcgcgattttccccgtgaactg
gtaccagtggtgttagcaccattcctgtatccaggagacggggaaacaccacagttcaag
atcgagttcaacatggctgtcaatcaaatggataacaatactctggtggagttaattatg
gaattaggatatagctttaccagtagtgtggacgaatgccgatcggcattgacgggttta
ggcgcgagggaaataccgccggcatgcgttgctcgcgtgttggcgcatatggcacgcagt
tgtagcaacctcgacgatgctggcggtttacaatcattttggggtaattcggccgcctcg
caggattcgaataaggaaaaaccatcggacagtatcattcccacgacatggaacgtggaa
gtatttattcaaactttaaaagaaatgcaatctacattatcttggaacgatgtcgtagtc
aagttggaccatgcagagtttattatcaaggataggcaaggtttaagcttattgattact
ggtcttaaattaggtctccaacatcaaggatatccgcctgacatgtttcccgtcgagcta
ttctatcgacactgggataatgtagagggtcaattctctttgattcaacagattctcaag
tgtccagatatattttgtttcgccgattatccatatcattcggtaactgtcgatgtattg
aaggcagctcctgagagcgatagcaaagaaggtcaaacgtggcgatcgctgaatatagtc
gaactgcttctgcatatggcagagagaggcttatataattctgtacaggaaatatttaaa
tggccggtgcaacactgtccggacgtgctcgtcttggcgttattacaaataaatccgccg
ctcacgttactgagacaggaactctttaccacattattgcccatctttctcggcaatcat
ccaaattctgctgtgatactgcatcatgcatggcatgccaataacactaaaataaagacg
attataatgcatgccatggcggattggtatacacgcggtgatcatgatcaaacaagattg
tctcgaattttggatgttgcgcaagatttgaaagctctttctgccttactcaattcgcaa
tcttttccattcgtcattgatctcgcttgtttggcgtcccgacgagagtatttgaaactg
gaaaaatggctaacagataaaatcagagatcacggagaagttttcgttgccgcgtgcgtc
aagttcctacaacgacgatgtcctcaagtcatgggtcctggtataaaggaagatcttaca
gttcccaaagcgagtcagttaccgcaggaaacgctcactacaatattggcttgtttacaa
gtttgcgctgggagtgtctcccaagaactctcggaattaataatgacgatggtgcagaat
tgcagtctaatgttgagtaagagcactatgaacaggccaccaccgccgggagttttgaga
catcgaggattagaaccgtttaatccagcaactttgggaagccagttattttcctcgaag
caagtagatccccttgggaatcttagttcgagtctcgctactatgggtcttggcacgggt
ctcggacctccgagtagttccgcgtttaatttgcccggcgctctaggacctctagtttcg
gcacctggctctccttcgcgactcatgggaccctctccgagcccgttctccatattgccc
ttatcctcgcaactacactcgggtccagttggtactcaaggaccgtccgtacttcctggt
ggtacgataggcggattgggacgtctcggaccgccgaccggcatcgagaaagcgagaatt
ccggaaacctcgaatctatttccggacatgggtcaaaatgtatccaaagaggtcgaggac
gaggcaaacagctattttcaacgtatatacaatcatccgccacacccgactttgtcgatc
gacgaggtgctcgatatgttaaaaaaatttcaagattccggtattagacgggagagagag
gtgtttaattgtatgttgcgaaatttattcgaggagtatagatttttcccgcaatatccg
gagaaagaactgcagataacggcgcaattgttcggtggaattatcgagagaggactcgtc
aatagttacatgactctcggattggcgctaagatttgtcctcgacgcgctcaaaaaaccg
gaggctagcaaaatgtactatttcggcataacggccttggatcgattcaagagccgtttg
aaagattaccaaacatattgcgaacatgttagaacgattccgcatttcaacgaatttccg
cagcatctgatagagtatatagaatacggattgcaaggacaggagccaccgtcgagacct
caaggcccagttcttccgaaaactttggcggctatcttggctccggtcacgactccttat
aagaccatgactacgactaccgtcacaaccagcactacacaagcgaaaccgtccacgact
ccgactgcatctctttcggccagaccctctatgccttcggtcgctaatgcaactaatatc
gatacgttgctcgtggcgacagataaagaggaaaaaatcacgacgccgccagaagctttg
caggataaaacggctttcattttcaataatctcagtcaattgaatctgcaacagaaatgc
gacgaaattcgcgagattgtcacggaggaatattggccgtggatggcgcaatatctagta
atgaaacgtgccagtatagagttgaattttcatgccctatactcgaattttttggattgt
ataaaattacctgaggtgaataaaatggtcacgagagagacatttcgaaatatcaaggtt
ctcttacgaagcgataagggaatagctaatttctcggatcggtcgctattaaagaattta
ggacattggctcggaatgttaacactcggcaggaataagcctattttgcagatagacata
gatttaaaaagtttactcgttgaagcatatcacaaagggcaacaagaactactttatgta
gtgccctttgtcgcgaaagtacttgagagttgtgcgaaaagtcgtgtctttcgtccaccc
aatccctggactatggcgattatgaatgttctagctgagctacatcaggaacctgatctg
aaattaaatttaaagtttgagatagaagtactttgcaagaatctgagcattgatgtcggg
gaactgaaaccaatcatttatctgaaagatccggaaaaattgcgtaatttagaatatcag
ttatcgcatccgaacaagaaatcggaaactactagcaatcaacaacaatctcaggggcct
atagaggaattggtcggagctacaacgagcggcggcgccgtcatcaatcctcaatccgcg
ccacccgcgaatacaacaccctcgttgccgaccggcggcgcgcctgaaccacgattcaat
tatatggatatatctgtaacaggcattgccaatatatcgcagcacattactattaacaat
caattgcccctattccaaacacatcctcatctgaagcagtttattcgcccagcagtcgaa
agagcgattcaagaatggattcatcctgttgtcgatagatctatcaagatagctcttaca
actagcgagcagatagtgaagaaagatttcgcgttggatccggaagaactgcggatacgg
acggctggacgtaacatggtgcgcaatttaaccgctggcatggctatgatcacgtgtcgc
gatcaaattctggcatccatcagcacgaatttaaaacaagccttgctcacggcattgatc
ggtacgactccacagcaaaaggagcttgccgaacaagcggcgaatgtagttgccgctgat
aacatggaactcgcctgcgcatttgtacaaaagactgctatcgagaaagcgatacctgag
atggacaagcggctactaagcgagatggaattgcgaaaaattgctcggcaagaaggccga
cgatactgcgatcctctcgccaaatatcaagccgagcggatgccagagcaaatccgattg
aaagtcggtggtgtgacgccacaacagatggccgtttatgaagaatttgccagaaatatt
ccaggatttctaccactctccgaacgggatacacaagtactcttcatgccgaaacctatc
aatgagactcccgtcgcgacgttcacacctaattcggccgtggcagtcgctacggcgcaa
caagtagcggcttacgcggcggctgttagcaatgacgaggtgggcgctatgctggaaaaa
ctagccgcggaagcggaagttctattggctgctgtgggacctgcggcgcctccgtcgcag
catgctacctttcataaccttctggaaacgatcattctgaccagaagatcaagagatgcc
ggtgccgctatgacattattaaagaaagctatcgaaggtttggtggatgggctagtcttc
actaacaatgtcatggattcggagggtcttttacaacgctaccgagaattaaacttgcgg
atcttgaaatgtcttcaggatccacgtgcgtacggtatgcaatggaccaataagcacgtg
actcgttgtctaaccgagtacagagaagaatttcgatataattttgaagccatagattat
cttataaggtctcatttgatcagtcttccacaattcgacgtagctctagcgcaagctatg
gaggcaggaagcgccatggcaacagcattcgctatgcaattggttcagctttatttgatt
gacgagagacaagcgactcatgttaccgagactgacttatttcatacaattgaaatattg
gctcgaatggcacatcacagaacaccaccggaaggaatcttactctttagattaacgagt
ttagtagattcactgcgtgccaatcacgattctggtgtactggtggacagagctccagca
ggacctacggcacacattcattctggaatcctgcaggtgagagctcgcgattttgatgat
ccaccgggactaatggaaaagacggagtatctgttgcgcgaatgggtgcagatgcatcac
agtccgcagcacgcacgtgatcctaccaaagccttcagcatatttgtgcatcagatgaac
atacatggaattctcaaaaccgacgatctaattacgagatttttcaagctaagcactcag
atgtgtgtcgatctctgctatcgcgctctctcggaaaccgcgacagctccctcgatcatg
cgtgcgaagtgctttcattcgttggacgcgtttgtacgtttggtggcactcttagtgaag
cattcgggcgacgccaccaacacccacaccaagatcaatctcttgaacaaagtgctcggt
atcgttgccggagtgctgctacaagatcacgagatacgcggcaccgatttccagcaattg
ccatatcacagaatcttcatcatgctcttcctggagctgtgcgcgccggaaccagtactg
gaggctgtcaactttcaagtattgacagccttctgtcacaccttgcatattctacgtccg
gcgaaggcatccggcttctgttacgcctggctggagttggtctctcatcgagttttcata
ggacgtatgctcgccattacaccacagcaaaaatgctggggtatgtatgcgcaacttctt
attgatttattcaagtacctcgcgccctatcttcgtaatgcggagctcgcgaaacccgtg
acaagcctttataagggcacactgcgagtgttgctggtactgttgcacgacttccccgag
tttctctgcgactatcactacggattttgcgatgtaataccgccgaactgcatacaaatg
agaaatctgatattgagtgctttcccaagaaacatgcggctgcccgatccgtttacgccg
aatctaaaggtcgacatgcttcaagaaatagcgcacgccccgcgtgttctcaccaatttc
gcgtccacaatacagccgttgaccttcaagaaagaactcgactcttatttaaaagctcgc
gcgccggtcacctttctgtccgagttgcgcagcaatctgcaagtatcgcaagaggccggc
gtacgttacaacattcagttaatgaatgctctggtgctttacgtgggtacgcaggcaata
gcatttattcgcagcaagggccacgctcccaatatgtccaccatcgcgcactccgcacac
atggacatcttccagaatctggcggtcgatctcgacaccgagggtcgttacttgttcctg
aacgccattgcgaaccagctgcggtatcccaacagtcatacgcattatttcagctgtacg
cttctctacctgttcgctgaagcgaacacggaagcgatacaagagcagatcactagagtt
ctcctcgaaagactgattgttaacagaccacatccatggggtcttctcatcaccttcatc
gaattgatcaagaatccgacttataaattctggtcgcacgagtttgtacattgcgcaccg
gagattgaaaaattgttcgaatccgtagcgagatcgtgtatggtccagaaacaggtgcct
accgcggagacagaaatcccggagtga
DBGET
integrated database retrieval system
