Paracoccus methylovorus: JWJ88_04590
Help
Entry
JWJ88_04590 CDS
T08684
Name
(GenBank) IclR family transcriptional regulator
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
pmeh
Paracoccus methylovorus
Brite
KEGG Orthology (KO) [BR:
pmeh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmeh03000
]
JWJ88_04590
Transcription factors [BR:
pmeh03000
]
Prokaryotic type
Helix-turn-helix
IclR family
JWJ88_04590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
Dimerisation
HTH_24
MarR_2
MarR
HTH_20
HTH_29
HTH_38
HTH_Crp_2
HTH_23
HTH_5
TrmB
HTH_9
LexA_DNA_bind
HTH_11
HTH_DeoR
HTH_40
HTH_Cmi2_C
Sigma70_r4
Fe_dep_repress
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
QRZ13944
LinkDB
All DBs
Position
1:912255..913094
Genome browser
AA seq
279 aa
AA seq
DB search
MSVQIRKRGRPRGRAGGAAAEDSGGIRALDRALEILDLIAVSSGLTLSEIAHRLDMAPST
VHRVLVTLAARGVAETDSQTQAWYVGPTAFRHGSAFMRRSGLVERARPLLRRLMEVTGET
ANLGILNGDAVLFLSQAETHETIRAFFPPGTRSALHASGIGKALLAHTRPSDLKRMIREM
TLERFTDMTLTDPQALLEDLARIRARGYSLDNEERTPGMRCIAAPIFDLAGEAAAGISVS
GPSLRMSDARLAAMSDAVIEAARELSFGMAPRPEEGERI
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtccagatccggaaaaggggccgtcccagagggcgtgcgggtggtgcggcggcc
gaggattcgggtggcatccgtgcgctggaccgggcactggaaatccttgacctgattgcg
gtttccagcggtctgacgctgtccgagatcgcgcatcggctggatatggcgccttccacc
gtgcatcgcgtgctggtgacgctggcggcgcgcggggttgcggaaaccgacagtcagacc
caggcttggtacgtggggccgacggctttccgtcacggttcggccttcatgcgccgctcg
ggactggtcgagcgggcgcggccgctgctacgccggctgatggaggtcacgggcgagacg
gccaacttgggtatcctgaacggcgatgccgtgctgtttctaagtcaggccgagacgcat
gaaacgatccgcgccttctttccgcccggcacgcgctcggcgctgcacgcctcggggatc
ggcaaggcgctgctggcccatacgcggccctcggacctgaaacgcatgatccgcgagatg
acgctggaacgctttaccgacatgacgctgaccgatcctcaggcgctgctggaggatctg
gctcgtatccgtgcgcgcggctattcgctggacaacgaagaacggacgccgggtatgcgc
tgcatcgctgccccgatttttgatctggccggcgaggcggcggcgggtatctcggtctcg
gggccaagcctgcgcatgtcggacgcccggctggcggccatgtccgacgcggtgatcgag
gcggcgcgcgaactgtcttttggcatggcgccgcgacccgaggagggcgaaaggatatga
DBGET
integrated database retrieval system
