KEGG   Poecilia mexicana (shortfin molly): 106916972
Entry
106916972         CDS       T08022                                 
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
  KO
K08131  collagen type IX alpha
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei04510  Focal adhesion
pmei04512  ECM-receptor interaction
pmei04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106916972 (col9a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106916972 (col9a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106916972 (col9a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:pmei00535]
    106916972 (col9a2)
Proteoglycans [BR:pmei00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   106916972 (col9a2)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 106916972
NCBI-ProteinID: XP_014841102
Ensembl: ENSPMEG00000008356
UniProt: A0A3B3WVL6
LinkDB
Position
Unknown
AA seq 688 aa
MAALSALLKTWVILQTLCLALAQVRGPAGPPGPPGPPGIPGSDGIDGEKGPPGSPGPPGQ
KGEPGEPGPDGPPGENGIDGLIGAKGDRGPIGNPGPKGQPGPSGEPGRPGVGLPGLAGAP
GPIGLPGQIGSPGPKGVLGPPGPPGLPGPPGKPGPPGKFIGLEEGSADLQCPLNCPAGPK
GPQGLQGVKGHKGRAGVLGDPGSIGKPGPKGDVGISGEQGIPGPPGPLGLRGYPGMMGPK
GEAGPRGYKGIVGPVGIPGPPGEEGPQGPLGDSGEKGDKGGRGIQGPQGAVGKKGENGLP
GIDGKDGTPGIPGIKGAPGQPGMPGPPGPAGTAGLPGTPGGKGEPGRKGEPGPRGHSGMP
GTPGPLGEPGIPGEPGMEGVPGPKGDRGQRGPVGPQGAVGKPGSKGERGPIGIPGPQGLT
GTKGDQGFQGKVGPKGDIGDPGVEGLAGEKGEKGLSGEPGPKGQQGIRGDPGHNGPTGDP
GKPGDPGPPGLPGPRGLNGERGVPGVPGIPGQTGRDASDQHIIEVVLKMLQERLQAVAVS
AKRAVLGGAGVMGPPGPPGPPGAPGPQGPHGLPGTRGIPGMIGGPGQIGNTGLKGKRGPK
GERGDPGKPHPGQPGPPGIQGPPGIDGVARDGRPGERGPQGAAGEPGHPGKAGPPGLLGF
CEAAMCLAASAYTSPRLQEAGTIKGPNV
NT seq 2067 nt   +upstreamnt  +downstreamnt
atggctgctctctccgccttgctgaagacctgggtcatcctgcaaaccctgtgcctggct
ctggcacaagtgaggggtccagccggacctccaggtccaccaggtcctcctggcattcct
ggctcagatggcattgatggggagaaaggaccgcccggttcccccggcccaccgggacaa
aagggagagccaggagagcccggccccgatggaccgcccggagagaacggcattgacggt
ttgattggagcaaaaggtgatcgcggaccaatcggtaaccccggcccaaagggtcaacca
ggtccaagtggtgagcctggacgtccaggagtcggccttccaggtctggctggtgcccca
gggccaattggccttccaggtcaaattggatcgcctggaccaaagggtgttttgggacca
ccaggtcctccaggactccctggacctccaggcaaaccgggtcctccaggcaagtttatt
ggtctcgaggagggtagtgcagacttgcagtgtcctctcaactgcccagcaggacccaaa
ggccctcagggacttcagggtgtaaaaggacacaaagggcgtgccggcgttctcggagac
cccggcagcatagggaaaccgggacccaagggagatgttggtatctctggggagcagggc
atcccaggacccccgggtccgttgggtctgcggggctatccaggaatgatgggtcctaaa
ggagaggccggccctcgtggatacaagggcatcgttggacctgtaggaattcctggaccg
cctggtgaggagggacctcaggggccacttggggactcaggagaaaaaggagacaaaggc
ggccgaggcatccagggcccacagggggccgttggcaaaaagggggagaatggtcttccg
ggtatcgatggaaaagacggcacacctggcattcctggaatcaagggggctcctgggcaa
cccggtatgcctggccctcctggtcctgcagggacagcaggtttgcctggcacacccgga
gggaaaggggaacctggaagaaagggggaacctggaccgaggggccacagtggcatgcct
ggtactcctggtcctttgggtgaaccaggtattcctggagagccaggtatggaaggagtt
cctggacctaagggagacagaggacagcggggcccagtggggccacagggagccgttggg
aagcccgggagcaaaggagagagagggcctattggtatcccaggcccacagggacttact
gggactaaaggagaccagggcttccaaggaaaagttggtccgaagggagacataggcgac
ccgggtgtcgagggattggctggcgagaaaggcgaaaagggtttgtctggagaaccgggg
cccaaaggacagcaaggaatcaggggggaccccggacacaacggccccactggggacccc
gggaaaccaggggatccggggccacctgggctgcctggtccaaggggactcaacggagag
agaggagtacccggcgtaccgggcattcctggacaaacggggcgcgacgcatccgaccag
catattatcgaagtggtgctaaagatgttgcaggaaagactgcaggctgtggcagtgagt
gccaaaagggctgtgcttggtggcgcgggtgtaatgggacctcccgggcctcctggtcca
ccgggggcacctggcccccaagggccacatggcttacctggcacccgtggtatccctggt
atgattggaggtccggggcagattggcaacactgggctaaaaggaaagagagggccaaag
ggagagagaggagatccaggtaaacctcacccaggtcaaccaggacctccagggatacaa
ggtcctcctggcattgatggtgtggctagagatggcaggcccggtgagagaggacctcag
ggagcagctggtgagccgggtcaccctggtaaggcagggcccccgggtcttctcgggttc
tgcgaggcggcaatgtgtctggcggcatcggcgtacacctcgccgagattacaagaggcg
gggacgatcaaaggacccaacgtttag

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