Poecilia mexicana (shortfin molly): 106924227
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Entry
106924227 CDS
T08022
Symbol
helz
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106924227 (helz)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
106924227 (helz)
3'-5' decay
Other 3'-5' decay factors
106924227 (helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_19
AAA_30
ResIII
UvrD-helicase
PAM2
zf_CCCH_4
AAA_22
Mov-10_helical
AAA_16
PhoH
zf-CCCH_4
AAA_5
Motif
Other DBs
NCBI-GeneID:
106924227
NCBI-ProteinID:
XP_014853297
Ensembl:
ENSPMEG00000011144
LinkDB
All DBs
Position
Unknown
AA seq
2019 aa
AA seq
DB search
MADRRAEKSCEEASKSLARREYEAAVTHSTDALVVLAPQASSPGAPVLPSPPSAVAAGPL
RSRALLYRIAAFLQLKNYDGADEDCKHVLADEVARGDGSLQASLRSMLLDGSLQEVVSIL
SKSLYGEPVNGIVTKDLTRLKMLFSEIEAIKREMAPEYTDDQDEEVQDGWQFRPPPRGVT
SSEEYTLCKRYLEQGLCRYGAQCTSAHSQEELMEWQKRYASRLIRLKQQQESKHFTENYM
ETLIEKWMNSLSPEKVLSDSLEGVTVETSSGLSVTVTSKKSSHSWIFSLLCKPARKLFRI
ALLYDAHRPHFFITGVSAGDRLQSVPKGCQEWTPGDDTAAAPDNGLDHCVYKVAVGFSTE
IFGTFRQTIVFDFGSEPVLMQRIMVDAASIEDLEHLLAARQQLLITAKRWDSSCKTIVEF
TPNETVADLERSLLARYQIPLSADQLFTQSVLDKTLTKDNYQARLHDLLYIEEIAQYKEV
SKFNIKANLQLVTSFMLTGISVGAKYAQNGQLFARFKLTETLSEDTLAGRLVMTKVNSVL
LLPLGREGFGGHAPSGVKERVYEAVIEEKTKDYIFLRICKSCCEELMLQPDREIQVELQF
QLNRQPLCEMHYALDRIKDNTILFPDIGLVPTIPWSPNRQWDEQLDPRLNAKQKEAILAI
TTPISISLPPILIIGPYGTGKTFTLAQAVKHILRQDSSRVLICTHSNSAADLYIKDYLHP
YVEAGNEHARPLRVYFRNRWVKTVHPVVQQYCLISSTQVTFQMPTREDILRHRVVVVTLS
TSQYLCQLDLEPGLFTHILLDEAAQAMECETIMPFPLASKTTRIVLAGDHMQLSPFVYSE
FARERNLHVSLLDRLYEHYPPEFPCRILLCENYRSHEAIINYTSELFYDGKLIASGKQPC
HKDFYPLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEELRKKWPVAWGKLDEGSIGVV
SPYADQVFRIRAELRKKRMHEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTAIKRKE
QLVEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWEHFISICHE
NSSLHGITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRPLQGHQSSSQGLHPHHHPHP
QHGLPGSNKQAVQHHQQQQHQQQSPPKGKQANHTEHLPPDGYVQSSPAVLMGNPIRAFTP
PLGAAPAGIGKSPSPVQRIDPHTGASILYVPAMYGGNVVMPMPLSLPWPGYQNRFAVDPR
IMSHPAAMAYNLNLLQPQNRGSPIPYSGVAHPSPLGLAQLSPEKDLQADLIRNGKVDGCT
KAEQTRLQTPERKNADIREKQGDLDTGQSRSLDSQQEGLVGFPNALLHRKDPSATQRSLN
YHLAPPNPAFPPHPAGGRTFPQQYPVPRLPYRVGQPPHPGMPQQNQQQQLSPAFTGGSHA
SFFSGSVAAHRSVQSPTMDGAESSGAEEMSGTVRTHMGHQGAQHPGLPQHNRVSNFGEDG
QDGSLVDGLDLQSPLTLEALSQQQQAARLGQWGEAAGPFLQGSVAFPLPQQLAHLAQSGM
ARFPPQLLRAATWGLSANMDDEAVSSATAGPTCSRYPGLLREMPPQEQPEPREATELQPP
PQSRLLQYRQSQTRASGEPSSSLAPLSNHAGPFPAGLYSHESGRNLLNENLLNNPALQQQ
HPGNPLYNAGSYPNQPPAQSGGGSPPPSNVKYLLQEAQWSHGGAASVSHQNHLLGNQSHS
LLYGLPLMAHPNRPEQVLMQLHHHQQQQQQQQHHQQQQQQNQGPDSESYHPLSPRTSAAA
ALHSVDEYEPRGPGRPLYQRRISSSYPDESSPAHPCHPEPQDHPQQPHGSYSYPPHDHLW
PSNGGGPGPFQNIPCNGASKLVQHRELLASKVHRQTDEQVKAEPAGAQQQQQQQQQQQQQ
QAHPHNLNSLQHQFPPLMPNKKQQPPPPPPPQPPTEPTQGAPSLVKPPTMSYASALRAPP
KPRAVRPEQAKKNSDPLSLLQELSIGSSNGSNGYYSYFK
NT seq
6060 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaggagagcggagaagtcatgtgaagaagccagcaaatcgttagccaggcgg
gagtacgaggcggcggtcacccacagcacggacgccctggtggtcctcgcgccccaagcc
tcgtcacccggcgcccccgtactgcccagccctccctcggcggtcgccgccggacccctc
cgcagccgcgccctgctctaccgaattgctgcctttctacaactgaaaaactacgacgga
gcagatgaagactgcaaacatgttctggcagacgaggttgctcggggtgacggctctcta
caggctagtttgcgctccatgcttttggatggcagcctgcaagaggtggtcagcatccta
tctaaatccctgtatggagagccagtgaacggcatcgttacaaaagacctgaccagatta
aaaatgctcttctccgaaattgaggcaataaaaagagagatggcccctgaatacacagac
gaccaggacgaagaagtccaagatggctggcagttccggcctcctcccagaggggtcact
agcagtgaggagtacacactttgcaaaaggtacttggagcagggcctgtgtcggtacggg
gcgcagtgcacgtcggcccactcgcaagaggagctgatggagtggcagaaacgttacgcc
tcccgactcattcgcctcaaacagcagcaggaaagcaaacacttcactgagaactacatg
gaaactctaatcgaaaagtggatgaactccctttccccggagaaagtgctaagtgacagt
ctggaaggcgtgacggtcgagaccagctccggcctttctgttacggtcacctcgaaaaaa
tcctcccattcctggatcttttccttgttgtgcaagccggccagaaaactgttccgcatt
gccttgctctacgacgcccatcgaccgcacttcttcatcaccggcgtttcagccggggat
cgcctgcagtcggttcccaaaggatgccaagagtggacgcccggagacgacacggccgca
gcgcccgacaacggcctcgaccactgcgtctacaaagtggcggtgggcttcagcaccgag
atctttggcaccttcagacagaccatcgtgttcgacttcggctccgagccggtgctgatg
cagaggatcatggtggacgccgcctcaatcgaagacttggagcacctactggcagccagg
cagcagctgctgataaccgccaagcgctgggactcgtcctgtaaaaccatcgtggaattc
acgcccaacgagacggtggccgacctggagaggagcctgctggcccgctaccagatccct
ctgtcggccgaccagctcttcacccagtccgtcctggacaagacgctgaccaaagacaac
taccaggcccggctgcacgacctgctctacatagaggagatcgctcagtacaaggaagtc
agcaagttcaacatcaaggccaaccttcagctggtcaccagcttcatgctaactgggatt
tctgttggagctaagtacgctcagaacggacagctctttgcacgcttcaaactcactgaa
acactttccgaggacactctggctgggagactagtaatgaccaaggtgaattcagttctg
ctgctgccgttggggcgggaagggttcggcggccacgctccctctggggtcaaagagcgc
gtttatgaggctgtgatagaggagaagaccaaggattacatcttcctgaggatttgcaag
agctgctgtgaggagctgatgctgcagcctgacagagagatacaggtggagctccagttt
cagctaaacagacagccactgtgtgagatgcactacgccctggatcgcatcaaagacaac
accatccttttccctgacattggccttgtccccacaatcccctggagcccaaaccggcag
tgggacgaacagctggacccccgtctgaacgccaagcagaaagaggccatcctggccatc
accacacccatctccatctctcttcccccaatcctcatcattgggccctatggtaccggc
aagaccttcaccctggcacaggccgtcaaacacatccttcgccaggacagcagcagggtc
ctgatctgcactcattccaacagcgcagctgacctttacattaaagactatcttcatcca
tatgtcgaagcaggcaacgagcacgccagacctctcagggtatatttcaggaaccgctgg
gtgaagaccgtccacccggtggtgcagcagtactgtctcatctccagcacacaggtcact
ttccagatgcccacaagggaggacatcctcaggcaccgtgttgtcgtggtcaccctcagc
acctcccagtacctctgccagctggatttggagcctgggttgttcacccacatcctgttg
gatgaagcagctcaggccatggagtgtgaaaccatcatgccttttcctcttgctagcaag
accacccgcatcgtgctggctggggaccatatgcagctcagtccgtttgtgtacagcgag
tttgcacgggagcgcaacctgcacgtgtcactgctggaccggctgtacgagcactacccc
cccgaattcccctgccgcatcctcctgtgcgagaactaccgctcccacgaagctatcatc
aactacacatccgagttattttacgatgggaagctaatcgcgagtgggaagcagccgtgc
cataaggatttctacccgctgaccttcttcacagccagaggagaagatgtccaggagaag
aatagcacagcctactacaataatgcagaggtgtttgagattgtggagcgggtggaggag
ctgcgtaagaagtggccggtggcctgggggaagctggacgagggcagcatcggggtggtg
tcgccgtacgccgaccaggttttccgcattcgtgccgaactccgaaagaaaagaatgcac
gaggtcagcgttgaaagagtgctcaacgtccaaggtaaacagttccgggtgctgttcctc
agcacggtgcggacgcggcatacctgcaagcacaagcagacggccatcaaacgcaaagag
cagctggtggaggattcgaccgaggacctcgactacggcttcctgtcaaactacaagctg
ctcaacacggccatcaccagagcccagtccctggtcgcggtggtgggagaccccatagcg
ctctgctctgtgggacgctgcagaaaattctgggagcatttcatctcaatctgccacgag
aactccagcctgcacggcatcaccttcgagcagatcaaggctcaactggaggccctggag
ctcaagaagacttatgtcctcaacccgctggccccagagttcatccctcgggccctcagg
ccccttcagggacaccagtcttcctcacagggccttcatccccaccatcatcctcatcct
cagcacggtttgcctggctccaacaagcaggccgtgcagcatcaccaacagcagcagcac
cagcagcagtcccctccaaaggggaaacaggcgaaccacacagagcacctcccaccagat
ggatacgtgcaatccagccctgctgtgttgatgggaaaccccatccgggccttcacgccc
cctctgggtgccgcgccggccggcatagggaagtcgcccagccccgtgcagcgcatcgac
ccgcacaccggagccagcatcctctacgtaccagctatgtatggaggaaacgtggtcatg
cccatgcctctgtcgttgccctggccaggttaccagaaccgctttgctgtggaccctcgc
atcatgagccacccagcggccatggcctacaacttaaacctgcttcagccacagaaccga
ggctctcccatcccttatagcggcgtcgcccacccctctcctttaggactggcccagctc
agcccagagaaggacctgcaggccgacctcatcaggaacggtaaagtagacggctgcaca
aaggccgaacagacccgtcttcagacgccagagaggaaaaacgcagacataagggaaaaa
cagggagacttagacaccggtcaaagtcgaagtttagattcccaacaggagggtctggtt
ggctttccgaacgctttgcttcaccgaaaagacccttcagctacccaaagatccctcaac
taccacctggcaccacccaacccagcttttcctccgcacccggctggcggaagaaccttc
ccccagcagtaccccgttcctagacttccctaccgggtcggccagcctccacatccaggg
atgccccaacagaatcagcagcaacagctcagtcctgccttcaccggtggaagccacgct
tccttcttcagcggctccgtggccgctcaccgatccgtgcagtcgcccaccatggacggg
gcggagtcttcgggggccgaggagatgagcggcaccgttaggactcacatgggccaccag
ggggcgcaacacccaggcctgccacagcacaacagggtcagcaactttggggaggatgga
caggatgggagtctggtggatggtttagacctccagagtcccctgactttagaagcgctg
agccagcagcagcaggcggccagactgggccagtggggggaagcagcaggccccttcctc
cagggcagtgttgcctttcctctgccccagcagctcgcccacctcgctcaatctggcatg
gctcgctttccccctcagctgctccgggctgctacctgggggcttagtgccaatatggac
gacgaagctgtttcctctgccaccgcgggtccaacatgctccaggtacccgggccttttg
cgagagatgcccccccaggagcagccggaaccgcgggaagcgaccgaactgcagccaccg
cctcagtcccgcctgctccagtatcgacagtcccagacccgtgcctccggcgagccctcg
tcttccttagcccccctgtccaatcacgctggccccttccccgcaggactgtactcccac
gaaagcggccggaacctcctcaacgaaaaccttctcaacaacccggctctgcagcagcag
cacccggggaaccccctgtacaacgccggcagctacccgaatcagccaccagcgcagtcc
ggcggcggcagccccccaccatcgaacgtgaagtatctcctgcaggaagcgcagtggtcc
cacggcggagcggcgtccgtgtcccatcagaaccacctcctagggaaccagagccatagc
cttctgtacggactgcccctgatggctcaccccaacaggccggagcaggtgctgatgcaa
ctccaccaccaccagcagcagcaacagcagcagcaacaccatcaacagcaacagcaacaa
aatcaaggcccggactctgagtcctaccaccctctgtcccctagaacatcagcagccgca
gccctccacagcgtagacgagtatgaacccagaggtccgggccggcccctctatcagcgc
cgcatctcctccagctacccggatgaatcatctccagcccacccctgtcatcccgagccc
caggatcacccgcagcaaccgcacggctcctacagctaccccccccacgaccacctctgg
cccagcaacggcgggggtcccggtccattccagaacattccatgcaacggagccagcaaa
ctagttcagcatcgtgagcttctagcttcaaaggtccatcgtcagacggacgagcaggtg
aaggcggaaccggctggcgcgcagcagcagcagcagcagcagcagcagcagcagcagcag
caggcgcatccacacaacctcaactcccttcagcaccagtttccccctctgatgcccaat
aagaagcagcagccgccaccaccgccgccaccacagcccccgacagagcccacccagggg
gctcccagtttagtaaagccgcccaccatgtcgtacgcgagcgccctccgagcgcctccc
aaaccgagagccgttcggcccgagcaggcgaagaagaacagcgacccgctgtcccttctg
caggagctgagcatcggaagctcaaacggtagcaatggttattattcttactttaaatga
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integrated database retrieval system
