KEGG   Poecilia mexicana (shortfin molly): 106929275
Entry
106929275         CDS       T08022                                 
Name
(RefSeq) contactin-1a-like isoform X1
  KO
K06759  contactin 1
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei04514  Cell adhesion molecule (CAM) interaction
pmei04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    106929275
   04517 IgSF CAM signaling
    106929275
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:pmei04515]
    106929275
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pmei00537]
    106929275
Cell adhesion molecules [BR:pmei04515]
 Immunoglobulin superfamily
  Contactins
   106929275
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pmei00537]
 Others
  106929275
SSDB
Motif
Pfam: Ig_3 I-set Ig_2 ig fn3 V-set FN3_DSCAM-DSCAML_C Ig_5 Ig_4 C2-set_2 Pur_ac_phosph_N Ig_6 Ig_PDGFR_d4 Zwei_Ig_N
Other DBs
NCBI-GeneID: 106929275
NCBI-ProteinID: XP_014861574
Ensembl: ENSPMEG00000006200
LinkDB
Position
Unknown
AA seq 1034 aa
MLLLALLLHLLAFSLADSSEQGAALDPFEADDATGFGPVFEEQPVDTIYPEEAPEARIVM
TCQARANPPATYRWRLNNTDIDLSKPGSSYSLSGGNLIISNPVRSEHVGKYSCLATNMYG
TVVSQEASVQFGYLDLFSPEERQAVHIKEGQGAVLLCAPPPHYPGELSFRWILNEFPTFI
PLDMRHFVSQITGNLYISKVESSDRGNYSCFTSSPSISKSVFSKFIPLKPLAERSIRKYP
ADLSVKFPHTTALVGQDIILECFALGNPVPAIRWSRKGKILPHNHEVRMAGAQLFIPNVQ
FNDSGVYICEAENHKGKDSHHANVSVEAHPEWVEHIVNTEKDLYSEYTMSCIAKGVPKPQ
IRWLKNGEPLDGTELRFSRLTSDDAGMYQCIAENRHGVIYANAELRVFFGAPKFPHDHVR
RVLAPKNGRVVIECKAKAAPKPTITWSKDTELLSNSSRMFIWDDGSLEILNVTPQDEGRY
TCFVENDWGKANSTRPLVVTESTKITLAPSNADVHTGDNTWMECAASYDPMVDITFVWSL
NGQEIDLDKDNTHYESILNGSSNTKLLIKNAQLKHAGRYTCTAKTHVDNTSASAHLVVRG
PPGAPGGVRIVDRSDKSVTLQWSRGADNHSPISKYTIQYRDEFSKGIWKNATTSPADVEG
NAETAKVVDLFPWTEYEFRVTATNTLGTGEPSRPSSKEKTLESVPVVAPSDVGRGDGGSR
GSRELTITWTPVQPQYYYGPDFGYIVAFKPREEKQWNRVAVTGPEANRYVHKDPNLAPMT
QFEVKVKAFNRQGEGPYSLTTIIYSSQDAPSEPPVIVEAKAISATAATVSWMLLSENNTD
GYKVKYWRLNENSDSGADSVVVSGKENHTRLENLTASSDYMIEIRGYNSVGYGPPSNHVK
IRTKKPPPDRPPKILDAKIKGRFVNVAWEPVVPFSNESLIENYKVLYKAKGASIGTLYST
PKRFIELLLQTDGEYVVEVRAHTEGGDGAVAQISVPPGNSQTRGRTQNYSGAVMSSSSLS
VLPMLLVALLLLNL
NT seq 3105 nt   +upstreamnt  +downstreamnt
atgctgctcctcgccctgctccttcatctcctggccttctcgcttgcagattcatcagag
caaggggctgcgctggacccttttgaagcagatgatgccacaggtttcggcccggtgttt
gaggagcagccggtggacactatctaccccgaggaggcgcccgaggccagaattgtcatg
acctgccaggcgagagccaatccacctgccacatacagatggaggctgaacaacacggat
attgacctgagcaaacctggcagcagctacagtttatcgggaggcaacctgattatcagc
aaccccgttagatcggagcacgtggggaaatactcctgcttggctaccaacatgtacggc
acggtcgtcagccaagaggcgtctgtccagttcggatatctcgatcttttttcaccggag
gagaggcaggcagtgcacatcaaggagggccagggggccgttctgctctgcgccccccct
ccacattatccaggcgagctgtcgtttcgatggatcctcaatgaattccccactttcatc
ccactggacatgcggcactttgtctcccagataaccggcaacctttacatctccaaggtg
gagtcgtcagacaggggcaactattcctgcttcacgtccagcccgtccatctccaagagc
gtgttttccaaatttattcccctaaagcctcttgctgaacgatccatcagaaaatatcct
gctgacctcagtgtgaagttcccgcacaccactgcattggtgggacaggacatcatcctg
gaatgctttgcactggggaaccccgtacctgcgattcgctggagcaggaagggcaaaatt
ttaccacataatcacgaggtgcggatggccggtgctcagttgttcatcccaaacgtccaa
ttcaatgacagcggcgtctatatttgtgaagcggaaaaccacaagggaaaggactcgcat
catgccaacgtatctgtggaggcgcatccagagtgggtggagcacattgtcaacacagag
aaagacctgtacagcgaatacaccatgtcttgcattgccaaaggtgtcccgaaacctcag
atccgctggctgaaaaatggagaaccgcttgacgggaccgagttgagattcagcaggctg
acatcagacgatgcgggaatgtaccagtgcatagcagagaatcgccacggagtcatttat
gccaacgcagagctaagagtgttttttggggctccaaagtttccccatgaccatgtgaga
agagtgctggcacctaaaaatggccgggtggttattgaatgcaaagccaaagccgccccg
aagcccaccatcacctggagcaaagacacggagctgctctccaactcctccaggatgttc
atctgggatgacggcagcctggagatccttaacgtgacgccccaagatgagggaaggtac
acctgttttgtggagaacgactggggaaaggccaacagcacgcgccctctggtggtcaca
gagtccacaaagatcacactggctccctcgaacgccgatgttcacactggagacaacacc
tggatggagtgtgcagcgtcgtatgacccgatggtggacatcacctttgtctggtccctg
aatgggcaagaaattgatttggacaaagacaacacgcattatgaaagcatcctgaatgga
agctcaaacactaaactgctcatcaaaaatgctcaactgaaacatgctggacgctacacc
tgcactgcaaaaacccatgtggacaacacctccgcttcagcccacctggttgtcaggggg
ccccccggtgcaccaggcggggtgagaatagttgacagatcggacaagagcgtcacgctg
cagtggagccgtggagcagacaaccacagccccatctccaaatacaccatccagtacaga
gacgagttctcaaaaggcatctggaagaatgccacaacgtctcctgctgatgttgagggg
aatgcagagacagccaaagtggtggatttgttcccttggacagaatatgagttcagggtc
acggccaccaacactctggggacaggagagccgagcaggccgtcaagcaaagagaaaacc
ctggaatcagttcctgtggtggcgccctcagatgtcggcaggggcgacgggggcagcagg
ggcagcagagagctgaccatcacatggacgccagtgcagccacagtactattatggacct
gattttggctacattgtggcctttaaaccccgtgaagagaaacagtggaacagggtggcg
gtgacgggccccgaggccaaccgctatgttcacaaagaccccaacctcgctcctatgacg
cagttcgaggtcaaagttaaagccttcaacagacagggagagggaccctacagcttaaca
accatcatttactcctcacaggacgctccatctgaacctccggtgattgttgaagcgaaa
gcaatttctgccacagcggcgactgtgtcctggatgcttctgtcagagaacaatactgat
ggatacaaggtgaagtactggagacttaatgaaaacagtgacagtggagcggactcagtc
gtggtgtcagggaaggaaaaccacacccggctggagaatctgacggccagctctgactac
atgattgagattcgaggctacaactctgtgggatacggaccacccagcaaccacgtcaag
atccgcaccaagaaaccccctccggatcgacctccgaaaatattagatgcaaagataaaa
ggcaggtttgtgaatgttgcctgggaacctgtggtaccgttttctaacgaatccctaata
gaaaactacaaggtcctgtacaaggctaaaggcgcgtcaataggaacgctgtactcaaca
cctaagcgcttcattgaacttctcctgcaaacagacggggagtatgtggtggaagtccgg
gcgcacacggagggaggagacggcgctgtggctcaaatcagcgtcccccctggaaacagc
cagacccgcggtcgcacgcagaactacagtggagcagtcatgtcctcctcatctctcagc
gtcctcccaatgctcctcgtggctctcctcctcctgaacctctga

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