Poecilia mexicana (shortfin molly): 106929275
Help
Entry
106929275 CDS
T08022
Name
(RefSeq) contactin-1a-like isoform X1
KO
K06759
contactin 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04514
Cell adhesion molecule (CAM) interaction
pmei04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
106929275
04517 IgSF CAM signaling
106929275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmei04515
]
106929275
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pmei00537
]
106929275
Cell adhesion molecules [BR:
pmei04515
]
Immunoglobulin superfamily
Contactins
106929275
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pmei00537
]
Others
106929275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
FN3_DSCAM-DSCAML_C
Ig_5
Ig_4
C2-set_2
Pur_ac_phosph_N
Ig_6
Ig_PDGFR_d4
Zwei_Ig_N
Motif
Other DBs
NCBI-GeneID:
106929275
NCBI-ProteinID:
XP_014861574
Ensembl:
ENSPMEG00000006200
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MLLLALLLHLLAFSLADSSEQGAALDPFEADDATGFGPVFEEQPVDTIYPEEAPEARIVM
TCQARANPPATYRWRLNNTDIDLSKPGSSYSLSGGNLIISNPVRSEHVGKYSCLATNMYG
TVVSQEASVQFGYLDLFSPEERQAVHIKEGQGAVLLCAPPPHYPGELSFRWILNEFPTFI
PLDMRHFVSQITGNLYISKVESSDRGNYSCFTSSPSISKSVFSKFIPLKPLAERSIRKYP
ADLSVKFPHTTALVGQDIILECFALGNPVPAIRWSRKGKILPHNHEVRMAGAQLFIPNVQ
FNDSGVYICEAENHKGKDSHHANVSVEAHPEWVEHIVNTEKDLYSEYTMSCIAKGVPKPQ
IRWLKNGEPLDGTELRFSRLTSDDAGMYQCIAENRHGVIYANAELRVFFGAPKFPHDHVR
RVLAPKNGRVVIECKAKAAPKPTITWSKDTELLSNSSRMFIWDDGSLEILNVTPQDEGRY
TCFVENDWGKANSTRPLVVTESTKITLAPSNADVHTGDNTWMECAASYDPMVDITFVWSL
NGQEIDLDKDNTHYESILNGSSNTKLLIKNAQLKHAGRYTCTAKTHVDNTSASAHLVVRG
PPGAPGGVRIVDRSDKSVTLQWSRGADNHSPISKYTIQYRDEFSKGIWKNATTSPADVEG
NAETAKVVDLFPWTEYEFRVTATNTLGTGEPSRPSSKEKTLESVPVVAPSDVGRGDGGSR
GSRELTITWTPVQPQYYYGPDFGYIVAFKPREEKQWNRVAVTGPEANRYVHKDPNLAPMT
QFEVKVKAFNRQGEGPYSLTTIIYSSQDAPSEPPVIVEAKAISATAATVSWMLLSENNTD
GYKVKYWRLNENSDSGADSVVVSGKENHTRLENLTASSDYMIEIRGYNSVGYGPPSNHVK
IRTKKPPPDRPPKILDAKIKGRFVNVAWEPVVPFSNESLIENYKVLYKAKGASIGTLYST
PKRFIELLLQTDGEYVVEVRAHTEGGDGAVAQISVPPGNSQTRGRTQNYSGAVMSSSSLS
VLPMLLVALLLLNL
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcctcgccctgctccttcatctcctggccttctcgcttgcagattcatcagag
caaggggctgcgctggacccttttgaagcagatgatgccacaggtttcggcccggtgttt
gaggagcagccggtggacactatctaccccgaggaggcgcccgaggccagaattgtcatg
acctgccaggcgagagccaatccacctgccacatacagatggaggctgaacaacacggat
attgacctgagcaaacctggcagcagctacagtttatcgggaggcaacctgattatcagc
aaccccgttagatcggagcacgtggggaaatactcctgcttggctaccaacatgtacggc
acggtcgtcagccaagaggcgtctgtccagttcggatatctcgatcttttttcaccggag
gagaggcaggcagtgcacatcaaggagggccagggggccgttctgctctgcgccccccct
ccacattatccaggcgagctgtcgtttcgatggatcctcaatgaattccccactttcatc
ccactggacatgcggcactttgtctcccagataaccggcaacctttacatctccaaggtg
gagtcgtcagacaggggcaactattcctgcttcacgtccagcccgtccatctccaagagc
gtgttttccaaatttattcccctaaagcctcttgctgaacgatccatcagaaaatatcct
gctgacctcagtgtgaagttcccgcacaccactgcattggtgggacaggacatcatcctg
gaatgctttgcactggggaaccccgtacctgcgattcgctggagcaggaagggcaaaatt
ttaccacataatcacgaggtgcggatggccggtgctcagttgttcatcccaaacgtccaa
ttcaatgacagcggcgtctatatttgtgaagcggaaaaccacaagggaaaggactcgcat
catgccaacgtatctgtggaggcgcatccagagtgggtggagcacattgtcaacacagag
aaagacctgtacagcgaatacaccatgtcttgcattgccaaaggtgtcccgaaacctcag
atccgctggctgaaaaatggagaaccgcttgacgggaccgagttgagattcagcaggctg
acatcagacgatgcgggaatgtaccagtgcatagcagagaatcgccacggagtcatttat
gccaacgcagagctaagagtgttttttggggctccaaagtttccccatgaccatgtgaga
agagtgctggcacctaaaaatggccgggtggttattgaatgcaaagccaaagccgccccg
aagcccaccatcacctggagcaaagacacggagctgctctccaactcctccaggatgttc
atctgggatgacggcagcctggagatccttaacgtgacgccccaagatgagggaaggtac
acctgttttgtggagaacgactggggaaaggccaacagcacgcgccctctggtggtcaca
gagtccacaaagatcacactggctccctcgaacgccgatgttcacactggagacaacacc
tggatggagtgtgcagcgtcgtatgacccgatggtggacatcacctttgtctggtccctg
aatgggcaagaaattgatttggacaaagacaacacgcattatgaaagcatcctgaatgga
agctcaaacactaaactgctcatcaaaaatgctcaactgaaacatgctggacgctacacc
tgcactgcaaaaacccatgtggacaacacctccgcttcagcccacctggttgtcaggggg
ccccccggtgcaccaggcggggtgagaatagttgacagatcggacaagagcgtcacgctg
cagtggagccgtggagcagacaaccacagccccatctccaaatacaccatccagtacaga
gacgagttctcaaaaggcatctggaagaatgccacaacgtctcctgctgatgttgagggg
aatgcagagacagccaaagtggtggatttgttcccttggacagaatatgagttcagggtc
acggccaccaacactctggggacaggagagccgagcaggccgtcaagcaaagagaaaacc
ctggaatcagttcctgtggtggcgccctcagatgtcggcaggggcgacgggggcagcagg
ggcagcagagagctgaccatcacatggacgccagtgcagccacagtactattatggacct
gattttggctacattgtggcctttaaaccccgtgaagagaaacagtggaacagggtggcg
gtgacgggccccgaggccaaccgctatgttcacaaagaccccaacctcgctcctatgacg
cagttcgaggtcaaagttaaagccttcaacagacagggagagggaccctacagcttaaca
accatcatttactcctcacaggacgctccatctgaacctccggtgattgttgaagcgaaa
gcaatttctgccacagcggcgactgtgtcctggatgcttctgtcagagaacaatactgat
ggatacaaggtgaagtactggagacttaatgaaaacagtgacagtggagcggactcagtc
gtggtgtcagggaaggaaaaccacacccggctggagaatctgacggccagctctgactac
atgattgagattcgaggctacaactctgtgggatacggaccacccagcaaccacgtcaag
atccgcaccaagaaaccccctccggatcgacctccgaaaatattagatgcaaagataaaa
ggcaggtttgtgaatgttgcctgggaacctgtggtaccgttttctaacgaatccctaata
gaaaactacaaggtcctgtacaaggctaaaggcgcgtcaataggaacgctgtactcaaca
cctaagcgcttcattgaacttctcctgcaaacagacggggagtatgtggtggaagtccgg
gcgcacacggagggaggagacggcgctgtggctcaaatcagcgtcccccctggaaacagc
cagacccgcggtcgcacgcagaactacagtggagcagtcatgtcctcctcatctctcagc
gtcctcccaatgctcctcgtggctctcctcctcctgaacctctga
DBGET
integrated database retrieval system