Poecilia mexicana (shortfin molly): 106932280
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Entry
106932280 CDS
T08022
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmei03036
]
106932280 (ddx4)
Enzymes [BR:
pmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106932280 (ddx4)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106932280 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106932280
NCBI-ProteinID:
XP_014866380
Ensembl:
ENSPMEG00000002976
UniProt:
A0A3B3WGN6
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MDEWEEEETKATTFTAASYSSNDAAGRDSWKSDHGEFGRGRGGKGRGRGGFWNSSADGDS
RDSNEDGERHGFSGRGGRGRGRGFNRMNSDGFSEDGDGAHENGFRGRGRGGRGGRGGLRQ
DAEQGGRGGFRGGYRGKDEEAFSPGEDQGPVKDDPDSDKPRVTYVPPTLPEDEDSIFSHY
KSGINFDKYDDILVDISGTNPPRAIMTFDEAALCESLRKNISKSGYVKPTPVQKHGIPII
SAGRDLMACAQTGSGKTAAFLLPILQQLMTDGVAASRFSETQEPEAVIVAPTRELINQIY
LEARKFAHGTCVRPVVVYGGVSTGYQIREILKGCNVVCGTPGRLLDMIGRGKVRLSKVRY
LVLDEADRMLDMGFEPDMRRLVGSPGMPSKENRQTLMFSATYPEDIQRMAADFLKPDYLF
LAVGIVGGACSDVEQKFVQVTKFSKREQLLDILKTTGTERTMVFVETKRQADFIAVFLCQ
EKVPTTSIHGDREQRERELALTDFRSGKCPVLVATSVAARGLDIPDVQHVVNFDLPKDID
EYVHRIGRTGRCGNVGRAVSFFDPEADGGLARSLVTVLSKAQQEVPPWLEESAFSSHGAG
FNPRKTFGSTDSRKMGSFQENSGPSQPAAQAAADDEEWE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtgggaagaagaggaaactaaagcaactacatttacagcagccagctattcc
tctaatgatgcggcaggaagagactcatggaaaagtgatcatggtgaatttggacgaggt
cgaggaggcaaagggagaggcagaggaggattttggaactccagtgcagatggagacagc
agggattctaacgaagacggggagagacatggtttcagtgggagaggaggtcgagggcgt
ggccgaggattcaacaggatgaactcagacggtttctctgaggatggtgatggagctcat
gagaatgggttcagaggacgaggaagaggaggtcggggaggaagaggaggattgagacaa
gatgctgagcagggaggaagaggaggcttccgtggaggttaccgtggaaaagatgaagag
gccttcagtccaggagaagaccaaggtccagtcaaggatgaccctgatagtgacaaaccg
agagtcacatatgttcctccaacgctccccgaagacgaagactccatcttctcccactat
aagagtggaatcaactttgacaagtatgacgacatattggtggacatcagcggcaccaac
ccccccagggccatcatgacctttgacgaggcggccctgtgtgaatccctgaggaaaaac
atcagtaagtctggctatgtgaagccgaccccggtgcagaagcatggcatccccatcatc
tctgcaggcagagacctcatggcctgtgcccagaccggctctgggaagacggctgctttc
ctgctgcccatcctgcagcagctcatgacggacggcgtggcggccagtcgcttcagtgag
acacaggaacccgaagccgtcatagtcgctccaaccagagaactcatcaaccagatctac
ctggaggccaggaagtttgctcatgggacgtgtgtccgtcccgttgtggtctatggagga
gtcagcactggataccagatcagggaaatcctgaaaggctgtaacgtggtttgtggaact
cctggacgtctgctggatatgattgggagaggaaaggtgcgactgagtaaggtgcggtac
ctggtgctggatgaggccgaccggatgttggacatgggctttgagccagacatgcggcgc
ctggttggctcccctgggatgccgtccaaggagaatcgacagactctgatgtttagtgcc
acctaccctgaagacatccagaggatggctgccgacttcctaaagccggattacctgttc
ctggctgtgggcattgtgggtggagcctgcagcgatgtggaacagaagtttgtacaagtc
accaagttctccaagagggagcagctgcttgatattctcaaaaccacaggaacggagcgt
accatggtgtttgtggagaccaagagacaagcagactttattgctgtgttcctgtgccag
gagaaagttccaaccaccagcatccatggtgaccgagagcagagggaacgggagctggct
ctgacagatttccgctctgggaaatgtcctgttctggtggccacctctgtagctgcccgt
ggtctggacattccagatgttcagcatgtggtgaactttgacctcccaaaggacatcgac
gaatatgtccatcgtattgggagaactgggcgctgtgggaacgttgggagagcagtgtcg
ttctttgacccagaggctgatgggggtttggcccgctccctggtcacagttctgtccaag
gcacagcaggaagtgccgccttggttagaggagtctgccttcagcagccacggcgccggc
ttcaaccctaggaaaacattcggctccacggattccagaaagatgggctccttccaggag
aacagcgggccgagccagccagctgcccaggctgcagctgatgacgaggaatgggagtga
DBGET
integrated database retrieval system
