Poecilia mexicana (shortfin molly): 106933442
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Entry
106933442 CDS
T08022
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
106933442
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmei04040
]
106933442
Ion channels [BR:
pmei04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106933442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
SPESP1
Motif
Other DBs
NCBI-GeneID:
106933442
NCBI-ProteinID:
XP_014868178
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
MFSWVVKVVPQPAEAPAAAESVKNNEAKNASAKSPEEASEDGQNNGGVMGWLSNGFVSAL
PQPPGSPLLKGSNADCRPGDDGDRNGVMGWVAQGLTKVLPQPDEKYREMAETQNAAEEHT
EVFEAATMPDYDPLPHIPVVEVVSEEEVSEVESLAPQFHPKVVSWIKQIVPQPVILPPGG
VPVEAPPKVSRSSLDKVLSPPPESLSGISLDTDSRAGVVNWFVSGLGLKMPQLVLPPKDE
AEGAAEVLQKASSKLKPDMVLEDMESDNEGQNRPKAAGSQGPAGDPAQQERGRSSSVEAL
GNCAARTAPQAPQAPASDSGTKTSQEDAETQTGRWTPFIESIKKEAEGVALASMEERLLQ
ERMEMARLAEEVARQTAEMAVRQMASEGTSIKLSLESQELLEEPEAELPVAPEEDNKLEP
GADAEKDGSGLQDEQKAEEPAFQEAGRDTAEEEQEEPEPEPEPEPEPEKQEVCAATVTEQ
PQKANDAPTSNTEKDEDASGDGCGEPSLSLRPAVSVEDVDQEGGGGAGGDESSSPALDPK
LSTLTVPVAPAGGRQSRGDKDGGRNRRTVWTKSRNLQAQSEDDDDEVSIPVRAWPSESSL
CSADSMLRERPASAASQTSQTSAVVSERLQELVRMFKERTEKAKEKLIDPDSSDEESVIA
APPQPPAAPQGEEEEDEEEGRLGGQCVGRVSGGKQIRWIRACWPIRFPASIDPFTNILYV
LWMFLVSAAWNWNVWLIPVRWAFPYQTPQNAPYWLLADYTCDLIYILDIAVFQPRLQFVR
GGDIVCDKKEMRKNYMKTKRFKFDVVSLAPLELLYFKTGINPLLRLPRLLKINSFFEFNE
RLEAILTKAYIYRVIRTTTYLLYCLHCNACLYHWASSYIGLGATQWVYNGVGNSYIRCYY
FAVKTLITIGGLPDPTSLFEIVFQLINYFVGVFAFSIMIGQMRDVVGAATAAQTYYRTCM
DNTIKYMTSYRIPKDVQNRVKTWYNYTWQSQGMLDEQELLTQLPDKMRLDIAVDVNYSIV
SKVPLFQGCDRQMIFDMLKSLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDERT
VFATLRAGSVFGEISLLAVGGVNRRTANVISHGFANLFILDKKDLNEILVHYPESKKLLR
KKARKMLNKGKKPEPKEEAKEPAPVPAASLKPETPRLLRAALEMTERSSGLKGALARVKE
RSSKSSISLQRSLSASLRPPDPVLSPRPDPDTSLSASSTTLRSASRNPADFPPAQLQLQR
GAAGWDESEDEWDEGGRGE
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctgggtggtgaaggtcgttcctcagcctgctgaagctccggctgctgctgag
tcggtgaagaacaatgaagccaagaatgcttcagcgaagagccctgaggaagcctcagag
gacggccagaacaacgggggagtgatgggctggctgtccaacggcttcgtcagcgcgcta
ccgcagccgccggggtcgcctctgctcaaggggtccaatgcagactgcaggccaggagac
gatggagatcggaacggcgtgatgggctgggtcgctcagggtctgaccaaggttctgcct
cagccggatgagaagtaccgagaaatggctgagacccagaatgccgccgaggagcacacc
gaggtgtttgaggcagcgacaatgccagattatgacccgcttcctcacatcccggtggtg
gaggtggtgtcggaggaggaagtgtcggaagtggagagtttggctcctcagttccatcca
aaggtggtgagctggataaagcagatagtccctcagccagtgattctgccccctggtggc
gtacctgtggaagcgccaccaaaagtctctcgctcctctctagacaaagtgctgtcgcct
ccgccggagtctctcagtgggatttcactggacaccgacagcagagctggagtggtcaac
tggttcgtgtccggcctgggtctgaagatgccgcagcttgtcctgccacccaaagatgaa
gctgagggagcagctgaagtgctgcaaaaagcttcctccaaactgaagcccgacatggtt
ctggaggacatggagtcggacaacgagggccagaaccgccccaaagctgcaggatcccag
ggtccagcgggcgacccagcccagcaggagagagggaggtccagctctgtggaggctctg
gggaactgcgccgcccgaacggccccgcaggccccgcaggcgccggcttcagacagcggg
acaaaaacatctcaggaagacgcagagacccagacgggccgctggacaccattcatcgaa
agcatcaagaaggaggctgaaggcgtggcgctggcctccatggaggaacgcctgctgcag
gagcgcatggagatggcccgcctggctgaagaggtggcccggcagacggcagagatggcg
gtgaggcagatggccagcgagggaacctccatcaaactctccctggagagccaggagcta
ctggaggaaccggaggcagaattgccagtagcaccagaagaagacaacaagctagagcca
ggagctgatgcagaaaaggacgggtccgggctccaggacgagcagaaagccgaagaaccg
gcattccaggaagcaggtagagacacagctgaggaggagcaggaggaaccggagccggaa
ccagaaccagaaccagaaccagaaaagcaggaagtgtgtgcagcaactgtgacggagcag
ccgcagaaagcaaacgatgctccgacttctaacacagaaaaggatgaagatgcttctgga
gacggctgtggagagccgagcctcagcctccggcccgcggtgagcgtggaggatgtcgac
caggagggaggaggaggagcaggaggtgatgagagcagcagcccggccctggacccgaag
ctcagcaccctgacggtccccgtggccccggcaggaggccgccagagtagaggagataaa
gacggtgggaggaaccgtcggaccgtctggaccaagtccagaaacctgcaggcccagagc
gaagatgatgatgatgaagtcagcataccggtccgagcctggcccagtgagtccagtctg
tgcagcgccgacagcatgctgagggagcgcccagcctctgctgccagtcagaccagtcag
accagtgctgtggtcagtgagcgactccaggaactggtcaggatgttcaaagagaggaca
gagaaagccaaagagaagctgatcgacccggacagctccgacgaagagagcgtcatcgcc
gctccccctcagcctccagctgccccccagggtgaggaagaggaggatgaggaggaaggc
aggttaggaggtcagtgtgtcggcagggtgtctggaggaaagcagattcggtggatccgg
gcctgctggccgatccgattccccgccagcatcgaccctttcaccaacatcctgtatgtt
ctgtggatgttcctggtttctgcggcctggaactggaacgtgtggctgatcccggtccgc
tgggcgttcccctaccagacgccccaaaacgccccctactggctgctggccgactacacc
tgcgacctcatctacatcctggacatcgccgtgtttcagccgcgcctgcagtttgtccgc
ggaggagacatcgtgtgtgacaagaaggaaatgagaaagaattacatgaaaacgaaacgc
ttcaagttcgacgtggtcagcctcgctcctttagagctgctgtactttaagacgggcatc
aaccctctactgcggttacctcgcctgctgaagatcaactcattttttgagttcaatgag
cgactggaggccatcctgaccaaagcctacatctacagggtgatccgaaccaccacgtat
cttctctactgtcttcactgcaacgcctgcctctaccactgggcgtcctcctacatcgga
ctcggggccacgcagtgggtctacaatggggtcggcaacagttatattcgctgttactac
tttgcggtgaaaactctgatcaccatcggcggtctgccggatcccacctccctgtttgag
atcgtattccagctcatcaactacttcgttggagtctttgctttctccatcatgattggt
cagatgcgtgacgtcgttggtgcggccaccgcggctcagacctactaccgcacctgcatg
gacaacaccatcaaatacatgacgtcctaccgcatccccaaagacgtccagaaccgcgtc
aagacctggtacaactacacctggcagtcacaaggcatgctggatgagcaggagcttctg
acccagctgccagataaaatgcgtctggacatcgctgtagacgtcaactactccatcgtg
agcaaagtccctctgttccagggctgtgacaggcagatgatctttgacatgctgaagagt
ctgcgctcggttgtctacctgcctggagattacgtctgcaaaaagggcgaagtgggtcgg
gagatgtacatcatcaaagcaggggaggtgcaggtggttggaggtcccgatgagaggacg
gtgtttgctacgctgagagcaggatccgtgtttggagagataagtttgctagcggtgggc
ggagtcaaccggcgcacggccaatgtgatctctcatgggtttgcaaacctgttcatcctg
gacaagaaagacctgaatgagatcctggtccactaccccgagtccaagaagctgctgcgc
aagaaggccaggaagatgcttaataagggcaaaaagcctgaacccaaagaggaagctaag
gaaccggctccggtaccagcagcttctctcaagccggagacgcccagacttctgcgagcg
gctctggagatgacggagaggtcgtctggactgaaaggagctctggctcgggtcaaagag
aggagcagcaagtccagcatctcactgcagcggtccctctccgcctcgctgcgtcctccg
gaccccgtcctcagccccagaccggacccggacacgtccctctctgccagctccacgacg
cttcgctcagcttctcggaaccctgccgattttcctcctgcgcagctgcagctgcaacgc
ggcgcggcgggatgggatgagagcgaggatgagtgggatgaaggaggaagaggggagtga
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