Paraglaciecola mesophila: FX988_03347
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Entry
FX988_03347 CDS
T06389
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pmes
Paraglaciecola mesophila
Pathway
pmes03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FX988_03347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmes03400
]
FX988_03347
Enzymes [BR:
pmes01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FX988_03347
DNA repair and recombination proteins [BR:
pmes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FX988_03347
Prokaryotic type
FX988_03347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QHJ13089
UniProt:
A0A857JLZ1
LinkDB
All DBs
Position
3882341..3883009
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AA seq
222 aa
AA seq
DB search
MTQAATWQDVLGEEKRQAYFTDILHFIASERAQGKVIYPPDKDIFNAFANTELHQVKVVI
LGQDPYHGPEQAHGLSFSVQKGVKPPPSLKNMYKALQHDFPDFIVPDHGCLQSWALQGVF
LLNTVLTVEQGKAHSHAKIGWERFTDKVITQLNAHASGVVFLLWGSHAQKKAGLIDASKH
HILTAAHPSPLSAYRGFFECGHFAQTNQILKDSGRTPIDWQI
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagccgctacatggcaagatgtactcggtgaagaaaagcgtcaagcttacttc
accgatattttgcattttatcgccagcgaacgcgctcaaggtaaagtgatatacccgcct
gacaaagatatatttaacgcgtttgccaatactgagcttcaccaagtgaaagtggttatt
cttggtcaagacccatatcacgggccagaacaggcccatggtttgagtttttcagtacaa
aaaggcgttaagccgcctccttcactaaaaaacatgtacaaagctctgcaacacgatttc
cctgactttatcgtacctgatcacggctgtttgcaatcttgggcgcttcaaggtgtgttc
ttacttaatactgtgctcactgttgagcaaggtaaggcgcattctcatgccaagattggc
tgggagaggtttactgataaggtgattactcagctcaatgcgcatgccagtggtgtcgta
tttttactgtggggcagccatgcacagaaaaaagcggggttaattgatgcctctaagcat
cacatactcaccgcggcgcacccttcgcctttgtcggcttatcgagggttctttgagtgt
ggccattttgcgcaaaccaatcagatattaaaagacagcggtcgcacgccgatagactgg
caaatttaa
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