Proteus mirabilis BB2000: BB2000_2796
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Entry
BB2000_2796 CDS
T02789
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pmib
Proteus mirabilis BB2000
Pathway
pmib03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmib00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BB2000_2796 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmib03021
]
BB2000_2796 (rpoB)
03400 DNA repair and recombination proteins [BR:
pmib03400
]
BB2000_2796 (rpoB)
Enzymes [BR:
pmib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BB2000_2796 (rpoB)
Transcription machinery [BR:
pmib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BB2000_2796 (rpoB)
DNA repair and recombination proteins [BR:
pmib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BB2000_2796 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
SPG4
Motif
Other DBs
NCBI-ProteinID:
AGS61245
LinkDB
All DBs
Position
complement(3052464..3056492)
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPDGQNGLEAAFRSVFPIQ
SYSGNAELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRAMNYSTEDILNLFFEKTTFEISNNKLMMT
LVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKEQIERIEVPVEYIAGKVVARD
YIDEATGELICAANMEISLDVLARLSQAGHKTIETLFTNDLDHGAYISETIRVDPTNDRL
SALVEIYRMMRPGEPPTREAAENLFENLFFSEDRYDLSAVGRMKFNRSLGREEVEGSGIL
SQEDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDALMPQDMINAKPISAAVKEFFGSSQLSKFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRVVENNAVT
DEIHYLSAIEEGNFIIAQANSVLDDDGHFVEELVTCRHKGESSLFSRDQVQYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRGDKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDETYAGEAGIDIYSLTKYTRSNQNTCINQTPCVSLGEPVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNYEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEESQLREVKKDL
TEELRIFEAGLFARIRGVLIAGGIEADKLDKLPRERWLELGLADEEKQNQLEQLAEQYDE
LKAEFAKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGNPVDLVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQKAYDLGMAPRQKVDLDTFSDEEVLRLAENLKKGMPTATPVFDGAEEMEIKEMLK
LADLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttctggatgttccctatctcctttctatccaacttgactcgttccagaagtttatcgag
caagatcctgatggtcaaaatgggctggaagcggctttccgttccgtatttccaatccaa
agctacagcggcaatgctgaactgcaatatgtcagctaccgccttggcgagcctgttttt
gatgttaaagaatgtcagatccgtggtgtaacttattctgcaccattacgtgtaaaactg
cgtctggtcatttatgaacgtgaagccccagaaggcaccgttaaagacatcaaagaacaa
gaagtctatatgggtgaaatcccattaatgaccgataatggtacttttgttatcaatggt
actgagcgtgttattgtttcccagttacatcgtagccctggtgtgttctttgatagcgat
aaaggtaaaacgcactcttcaggtaaagtactgtataacgcacgtattattccttatcgt
ggttcatggttagacttcgaattcgaccctaaagataatctttttgtccgtattgaccgt
cgtcgtaaattaccagcgactatcattttacgcgcaatgaactacagcaccgaagacatc
ttaaatctgttcttcgagaaaacaacgtttgaaatcagtaataataaactgatgatgacg
ttagttcctgagcgtctgcgtggtgaaacagcttcatttgatattgaagcaaacggcaaa
gtttatgtcgaaaaaggtcgccgtattactgctcgtcatattcgtcagttagaaaaagaa
caaattgagcgtatcgaagtacctgttgaatacatcgcaggtaaagtagtggctcgtgac
tatattgatgaagcgacaggtgaattgatttgtgctgctaacatggaaatctctttagat
gtgttagctcgcttaagtcaagctggtcataaaactatcgaaacactgtttaccaacgat
ttagatcatggtgcttatatttcagaaactatccgcgtcgatcctaccaacgatcgttta
agcgcattagttgaaatctatcgcatgatgcgtcctggtgaaccaccaactcgcgaagcg
gcagaaaacttatttgagaacttattcttctcagaagatcgttatgatctctctgcggtt
ggtcgcatgaaattcaaccgctctttaggtcgcgaagaagttgaaggttctggcatctta
agccaagaagatatcattgaagtgatgaaaaaactgattgatatccgtaatggtaaaggt
gaagtggacgatatcgaccacttaggtaaccgtcgtattcgttctgttggcgaaatggct
gaaaaccaattccgtgttggtctggtgcgtgttgaacgtgcagttaaagagcgtctatct
ttaggtgatcttgatgcattaatgccacaagatatgatcaacgcaaaaccgatttctgct
gcagttaaagagttctttggctctagccagttatcgaagtttatggatcagaataacccg
ctgtcagaaattacccataaacgtcgtatttctgcattaggccctggtggtctgactcgt
gaacgtgcaggcttcgaagttcgagacgtacacccaactcactatggtcgtgtgtgtcca
atcgaaacacctgaaggtccaaatatcggtctgattaactcattatctgtttatgcacag
actaacgagtacggattcttagaaacgccttaccgtgttgtagaaaacaacgctgtaaca
gatgaaatccactatctgtctgcaattgaagaaggtaacttcatcattgctcaggctaac
tccgtattagatgatgatggccacttcgtagaagaattagtaacttgccgtcataaaggt
gagtcaagtttatttagtcgtgatcaagttcagtacatggacgtttcaactcaacaggtt
gtttctgtcggtgcttcactgatcccattccttgaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggctgttcctacacttcgtggtgataaaccactggta
ggtacaggtatggaacgtgctgtagcggttgactccggtgttactgcggtagcaaaacgt
ggtggtactgttcagtatgttgatgcttctcgtatcgttatcaaagtaaacgaagatgag
acttatgctggtgaagcaggcattgatatttacagcttaactaaatatacccgctctaac
caaaacacatgtattaaccaaacaccttgtgtttctttaggtgaacctgttgaacgtggt
gatgtacttgccgatggtccatcaacagaccttggtgaacttgcattaggtcaaaacatg
cgcgtggcatttatgccatggaatggttataactacgaggactccatccttgtatctgag
cgtgttgttcaagaagaccgtttcacaactatccatattcaagaacttgcttgtgtgtct
cgtgatactaagttagggcctgaagagatcactgcagatattcctaatgttggtgaagct
gcgttatctaaactggatgaatcaggtatcgtttatatcggtgctgaagtgaaaggcggt
gatattctggtaggtaaagtaacaccgaaaggtgaaactcaactgactccagaagagaaa
ctgctacgtgctatcttcggtgaaaaagcatctgatgttaaagattcttctctgcgtgtt
cctaacggtgtatctggtacagttattgatgtacaagtcttcacccgtgatggcgtagaa
aaagacaaacgtgcattagaaatcgaagaatcgcaattacgtgaagttaaaaaagactta
acagaagagttacgtatctttgaagcgggtctttttgcacgtattcgtggcgttctgatt
gccggcggtattgaagctgacaaattagataaactacctcgtgaacgttggttagaactg
ggtcttgctgatgaagagaagcaaaaccagttagaacaattagctgaacagtatgatgaa
ctgaaagctgaattcgcgaagaaactggaagctaagcgtcgtaagatcactcaaggtgat
gatttagcaccgggtgtattgaagattgttaaggtttatctggctgttaaacgtcagatc
caacctggtgataagatggcgggtcgtcatggtaacaagggtgttatctctaagattaac
ccaattgaagacatgccatacgatgaaaacggtaatcctgttgacctcgtactgaaccca
ctgggtgtaccatcacgtatgaacattggtcagatccttgaaactcacttgggtatggct
gctaaaggtatcggtgataaaatcaatgcgatgctgaaacagcaacaagaagtggctaag
ttacgtgaatttatccagaaagcttatgatctgggtatggcacctcgtcagaaagttgat
ttggacaccttcagtgatgaagaagtgttacgtttggctgagaacctgaaaaaaggtatg
ccaactgcaacacctgtgttcgatggtgcagaagagatggaaattaaagagatgctgaaa
ttagcagatcttccaacttctggtcagattacacttttcgatggtcgtacaggtgaacaa
ttcgaacgtccagtaactgtaggttacatgtacatgctgaaactgaaccacttagttgat
gacaagatgcacgcccgttctaccggttcgtacagcttagttactcagcaacctcttggt
ggtaaagcacagtttggtggacagcgtttcggggagatggaagtatgggcactggaagca
tacggtgcggcttacacgctacaagaaatgcttactgttaagtcggatgacgttaacggt
cgtaccaaaatgtacaaaaacattgttgatggtaaccatcagatggaaccaggtatgcct
gagtcgttcaacgtattgttgaaagagatccgttcactgggtatcaacatcgaattggaa
gacgaataa
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