Pseudomonas mendocina NK-01: MDS_2220
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Entry
MDS_2220 CDS
T01473
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pmk
Pseudomonas mendocina NK-01
Pathway
pmk03030
DNA replication
pmk03430
Mismatch repair
pmk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MDS_2220
03430 Mismatch repair
MDS_2220
03440 Homologous recombination
MDS_2220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmk03032
]
MDS_2220
03400 DNA repair and recombination proteins [BR:
pmk03400
]
MDS_2220
Enzymes [BR:
pmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MDS_2220
DNA replication proteins [BR:
pmk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MDS_2220
DNA repair and recombination proteins [BR:
pmk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MDS_2220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AEB58251
LinkDB
All DBs
Position
2428811..2429569
Genome browser
AA seq
252 aa
AA seq
DB search
MTTENTVKRYVVLDTETTGMPVTDGHRIIEIGCVELLGRRLTGRHFHVYLNPDREIDEGA
IAVHGITNEYVADKPRFREVADEFYEFIKGAQLIIHNAAFDVGFINNEFALLGQSERADV
SDYCSVLDTLMMARERHPGQRNSLDALCKRYGVDNSNRELHGALLDSEILADVYLAMTGG
QTNLSLAGDGADGDGSGRQQATPIRRLDPSRARTRVIRASEEELAAHMARLAVIEKSAGG
PSLWAQLEKSPE
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaccgagaataccgtcaagcgctacgtggtgctggataccgaaaccacgggtatg
ccggtcaccgacgggcaccgtatcatcgagatcggttgtgtcgagttgttggggcgtcgc
ctgaccgggcgtcatttccatgtctatctcaaccctgatcgcgagatcgacgaaggcgcc
atcgcggttcacggcattaccaacgaatacgtggccgacaagccgcgcttccgggaagtc
gccgatgaattctacgagttcatcaagggcgcccaactgatcattcacaacgcggcgttc
gacgttggcttcatcaacaacgagttcgccctgttggggcagagcgaacgcgccgacgtc
agtgattattgctcggtgctcgataccctgatgatggcgcgtgagcgccatccggggcag
cgcaacagtcttgacgcgctgtgcaagcgttacggcgtcgacaactccaaccgcgaactg
cacggcgccttgctcgactcggagattcttgccgacgtctacctggcgatgacggggggg
cagaccaatctgtccctggcgggtgatggtgctgacggcgatggcagcgggcgccagcag
gctacgccgattcgccgcctggacccttcgcgtgcgcgcactcgcgtcattcgtgccagt
gaggaagagctcgcggcccatatggcgcgcctggccgtgatcgagaaatccgctggcggt
ccatcgctgtgggctcagctggaaaagtcgccggaataa
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integrated database retrieval system
