Passer montanus (Eurasian tree sparrow): 120508051
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Entry
120508051 CDS
T07277
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120508051 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120508051 (CNOT1)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120508051 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120508051 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
120508051
NCBI-ProteinID:
XP_039577268
LinkDB
All DBs
Position
Unknown
AA seq
2377 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCASVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGSQAHTWNVEVLIDVLKELNPTLDFKVVTYE
LDHPGFQIRDSKGLNIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITMAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQDLVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQQAWATDDVAQIYDKCMTEL
EQHLQSIPHTLAMNPQVQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADAD
LLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNM
QQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSR
GNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREW
VNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRALAEQQH
NPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHD
VRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWL
ELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVL
LVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEIN
IAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALV
LYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNS
HTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWN
HEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7134 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaataggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaaccaaactttatctcgacgctgtcgtacgccattgacaatcccttgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtaatttttggtctggctttactgaactccttcagctcagat
ctgcgaggttttgctgcccagtttatcaaacagaaactcccggatcttttgcgatcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctctttgggcagaagggagcctttggggtaggacag
gagcagattgacgctttcctcaaaacattacgtagagattttccccaggagcgttgccct
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaaccatgatggagagttctctggcagatttcatgcaa
gaagttggctatggcttttgtgcaagtgtcgaagaatgtcgcaacataatcatgcagttt
ggtgtgcgggaagtcacagctgcccaggttgccagggttttggggatgatggctcgaact
cattcaggattgacagatggaattccattacaatctatttcggctcctggcagtgggatt
tggagtgatggcaaagataagagtgatggaagccaagcccatacctggaatgtggaggtc
ttgattgatgttcttaaagagctgaaccctaccctggacttcaaagtagtgacgtatgaa
ttggaccatccaggatttcagattcgtgatagcaagggcctgaatattgttgtttttggc
atccagagagggcttggcatggaggtttttccagttaatgccatatacagaccttggaag
catgcagagggccagctctccttcatccaacattccctcataaaccctgacatcttctgt
tttgctgactacccttgccatactgttgccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgctacatggaagagcctggatttgattgagtctctgttacgattg
gcagaagtggggcagtatgaacaggttaagcagctcttcagttttcctatcaagcattgc
ccagatatgctggttttggccttattgcagatcaacacgtcctggcacaccttgcgccat
gaactcatctccacgctcatgccaattttccttggcaaccatcccaactcagccatcatt
ttgcactatgcatggcatggacagggtcagtctccttcaattcgtcagcttatcatgcat
gccatggcagaatggtacatgagaggggagcagtatgaccaggcaaaattgtcacgtatt
cttgatgtggcgcaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggaacctttcatccaggcctgtatgactttctta
aagagaagatgtccatctatcttgggtggccttgctccagaaaaggatcagcccaaaagt
gctcagcttcctccagaaaccttggcgactatgttggcctgtctgcaagcttgtgctggg
agtgtttctcaggagctgtcagagacgatcctcaccatggtagcaaactgcagtaatgtc
atgaacaaggctcggcagcccccacctggagtcatgcccaaaggacgcccgcccagtgcc
agcagcttggatgccatctctcctgtgcagatcgactcgcttgcaggaatggcctctctt
agtttaggtggctcagctgctcctcacacccagagcatgcaaggcttccctccaaacttg
ggctctgcattcagcactcctcagtcaccagcaaaagcgttcccgcctctctccacccaa
aaccagacaaccggtttcagcggcatcgggggactttcttcacagcttccagtaggtggt
cttactacgggtagcctgactggcataggaactggagccctgggccttcctgcggtgaac
aatgacccattcgtgcaaaggaagctgagcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgatttatctcaggtgtggccagaggctaatcagcacttt
agcaaagaaatagatgatgaggcaaacagctacttccagcgtatttacaaccatccccca
cacccaaccatgtccgtggatgaggtcttggaaatgctgcagagatttaaggactccaat
attaaacgggaacgagaagtgtttaactgtatgctgaggaacttgtttgaggaatatcgt
ttctttccccagtacccagacaaagagctgcacataaccgcctgtctcttcgggggcatc
atagagaagggactggttacttacatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttcccacatcatttacaggagtacatagaatatggacagcaatccagagat
cctcctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaggttccagcaaaagctcctcttgctggccaagtcagcactatagtg
accacctcaaccaccaccaccgttgcaaaaaccattaccatcacccgaccaactggagtc
agcttcaagaaagatgtgccgccttccattaatactaccaacattgatacgctgttagta
gcaacagatcaaacagagaggattgtggaacctccagagaatgtccaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaatatgacacagaaggtggaagaattgaaggaa
acagtgaaagaagagttcatgccttgggtatcacagtatcttgtgatgaaaagagtcagt
attgagcctaactttcacagcttatattcaaacttccttgacacacttaagaatccggag
tttaataaaatggttctgaatgaaacctacagaaatatcaaggtgctattgacatcagat
aaagctgcagccaacttctcagaccgttccttgttaaagaaccttggtcactggctggga
atgataacaatggctaaaaataagcccatcttgcacacggatttggatgtgaagtcacta
ctactggaagcatacgttaagggacagcaggaattgctttatgtagtgccatttgttgcc
aaagtcttagaatccagtgtcaggagtgtggtcttcaggcctccaaacccatggacaatg
gccattatgaatgttttagctgagctacatcaggaacatgatctaaaattgaatctgaag
tttgagattgaggtgctctgcaagaatcttgcactggacatcaatgagctgaaacctgga
agtctcctgaaagacaaggaccgtctgaaaaatctggatgagcagctgtctgctccaaag
aaggatgtgaagcagccagaagagctaccacccatcacaacaaccactgcttctacaact
ccagctaccagcaccacttgtacagccacggttcctccacagccccagtacagttatcat
gacatcaacgtctattctctgggagggttggctccacacattaccttaaatccaacgatt
ccgctgttccaagcgcacccgcagctgaagcagtgcgtgcggcaggccatcgagcgtgcg
gtgcaggacctcgtccatcccgtggtggacagatccatcaagattgccatgacaacctgt
gagcagatagtcaggaaggactttgccctggattctgaggagtcccggatgcgtgtggcc
gctcaccacatgatgaggaacctgactgctgggatggccatgattacctgcagggagcct
ttgctgatgagcatagctaccaacttgaaaaatagctttgctactgcactgagggcagcc
tccccacagcagagggacatgatggagcaggcagctgcccagttagcacaggataactgt
gagcttgcctgctgctttatccagaagacagctgtggaaaaggcaggccccgagatggac
aagaggctcgcaactgaatttgagctcagaaagcatgccaggcaagaggggcggcgctac
tgcgatcccgttgtgttaacgtaccaggccgagcggatgccagagcagatcaggttaaaa
gttggaggtgtggacccaaaacagctggctgtttatgaggagtttgcacgcaatgtccct
ggcttcttgcccaccaatgacttaactcagcctacaggattcttggctcagcctatgaag
cagcaagcttgggctacagatgatgtagcacaaatttatgacaagtgtatgacagagctg
gagcagcacctgcaatccattccacacaccctggccatgaatcctcaagtccaagcactg
cggagcctcttggaggccgtggtggtggctcggaactcccgggatgctattgctgcactg
ggactgctgcagaaggctgtagagggcttgctggatgccaccagcggggctgacgctgac
ctcctgctccgctatcgtgagtgtcacctgctggtgctgaaggctctgcaggatggccgt
gcctatggatctccctggtgtaacaaacaaatcactaggtgcctgattgaatgcagagat
gagtacaagtacaacgtggaagctgtggagctgctaatccgcaatcaccttgtgaacatg
cagcagtatgacctgcacttggctcagtccatggagaatggcttgaactacatggctgtg
gcatttgccatgcagttggtaaagatcttgttggtggatgagagaagtgttgcccatgta
acagaagcagatctgtttcacaccattgagacactcatgagaattaatgctcattccaga
ggaaacgccccggaaggattaccccagctgatggaagtggtccgatcaaactatgaagca
atgattgaccgtgctcatggaggtcctaatttcatgatgcattcaggaatttcccaagct
tctgagtatgatgacccaccaggcctgagggagaaggcagaataccttctgagggagtgg
gtgaacctttaccactcagctgcagcaggccgtgacagtaccaaagcattctctgcgttt
gttggacagatgcaccagcaggggatcctgaaaacagatgacctgatcacccgttttttc
cgtctgtgcaccgagatgtgtgttgagatcagctatcgcgccctggccgagcagcagcac
aaccctgcagccaaccccaccatgattcgggccaagtgctaccacaacctggatgccttt
gtgcgactcattgcactgctggtgaagcactctggggaggcaaccaacacagtcacaaag
atcaacctcctcaataaggttcttggtattgtggtgggagttcttctgcaagaccatgat
gttcggcagagtgagtttcagcaacttccttaccatcgcattttcatcatgttgctgttg
gaattaaatgctcctgagcatgtgctagagaccatcaacttccagacactcacagctttc
tgtaacacatttcacatcctgaggcctacaaaagctccaggttttgtttatgcctggctg
gaactgatctcccatcggatatttattgcaagaatgctggcacatacaccacagcagaag
ggttggcctatgtatgcccagttattgatcgatctgttcaagtacttggctcctttcctt
agaaatgtggaactcaccaaacctatgcaaattctttataagggcactctgcgtgtgttg
ctggtcttgttgcatgatttcccagaatttctttgtgactaccactatgggttctgtgat
gtgatcccacctaattgtattcagctaaggaatctgatcctgagtgccttcccacggaac
atgaggcttccagaccctttcacccccaacctaaaggtggacatgttaagtgagattaat
attgctccacgaatactcacaaatttcactggagtgatgccacctcagttcaagaaagac
ttggattcctatctcaaaacccgttctccagtcacctttttgtctgacttgcgaagcaac
ctgcaagtatcaaatgaacctggcaaccgctacaacatccagctgattaatgcactggtg
ctctacgtaggtactcaagctattgcacacattcacaacaaaggcagcacaccctccatg
agcaccattacccactcagctcacatggacatcttccagaatttggcagtagacctggat
actgaaggccggtacctcttcctgaacgccatcgccaaccagctgcgctaccccaacagc
cacacccactacttcagctgcaccatgctctacctgtttgctgaggccaacacagaggcc
atccaggagcagatcaccagggttctcttggaacgactgattgtaaataggcctcatccc
tggggtctccttattacattcattgagctgataaaaaacccagcctttaagttctggaac
catgagtttgttcactgtgctccagaaattgagaagttgttccagtcggttgcacagtgc
tgcatggggcagaagcaggcccagcaagttatggaagggactggtgccagttag
DBGET
integrated database retrieval system
