Passer montanus (Eurasian tree sparrow): 120508924
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Entry
120508924 CDS
T07277
Symbol
EXOSC9
Name
(RefSeq) exosome complex component RRP45 isoform X1
KO
K03678
exosome complex component RRP45
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120508924 (EXOSC9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120508924 (EXOSC9)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120508924 (EXOSC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120508924
NCBI-ProteinID:
XP_039578945
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MKATPLSNCERRFLLRAIQEKKRLDGRQCYDYRNIRVSFGADRGCCMVELGRTRVLAQVS
CELVPPKPSRPTEGVLFFNLELSPMAAPGLEPGRQSELLVSLNRLLERCLRDSKCIETES
LCVVAGEKVWQIRLDMHLLNHDGNITDAASIAGIVALCHFRRPDVSVQGEEVTVYTPEER
DPVPLSIHHMPICVSFAFFHQGTYLLVDPTEREERVMDGLLVIAMNKHHEICTIQSSGVV
MLLQDQILRCSKITAVKVAEITELIQKALENDQKARKEGGKFGFAESIPNQRITAFKMES
AAVDTSDVEEQAGEIIAKADPPSEVFASPVVHTPGTAQIGEGIESSWGDLEESEKEEAAE
EEGESEVAAFACEKMETEDTSTLRETKSKEPIVLSDSEEEEVVILEPQELPRKTRTQTSS
KQENPSKKAFNKKRRKKRTSR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgacgccgctctccaactgcgagcggcgcttcctcctgcgcgccatccaggag
aagaagcgcctggacgggaggcaatgctacgactaccggaacatccgcgtctccttcggc
gccgaccgcggctgctgcatggtggagctgggcaggaccagggttcttgcacaggtctcg
tgtgaactcgttccccctaagcccagtcggcccacggaaggtgtgctcttctttaatctg
gaactctcacccatggctgcacctgggctggagcctggcagacaatccgagttactggtg
tcactgaacagattactggagcgatgcctcagggattccaaatgcattgagactgaatct
ctctgcgttgttgctggtgaaaaggtttggcaaattcggctggacatgcacctgttaaac
catgatggcaacatcactgatgctgccagcatagcagggattgtagctctgtgtcatttc
cgcaggccagatgtgtctgtgcaaggagaggaagtaactgtgtacactcctgaggagcgt
gatcctgtccccttgagtatccaccacatgcccatttgtgtcagttttgccttcttccac
caagggacctatttgttggtggatccaactgaacgtgaggagcgggtgatggatgggctc
ctcgtaattgccatgaacaaacaccatgaaatttgtaccatccagtccagtggagtggtc
atgctgctgcaggatcagattctgaggtgcagtaaaataacagctgttaaggtcgcagaa
ataacagaactgattcagaaagccttggaaaatgaccaaaaagccaggaaagaaggtggg
aagtttggctttgcagagtccatccccaaccaaaggatcactgccttcaaaatggagagt
gctgctgtggacaccagcgacgtggaagaacaggctggagaaatcattgcgaaagctgac
cctccttcagaagtttttgccagtccagtagtgcacactcctgggacagcccaaattggg
gaaggaatagagagctcctggggagaccttgaagaatctgagaaggaagaagcagcagaa
gaggaaggtgaaagtgaggtggctgcttttgcatgtgagaaaatggagactgaggataca
agtacactgagggaaactaagagtaaggagcccattgtactgtctgacagtgaagaggaa
gaagttgtcattctggaaccacaggaactaccaaggaaaacaagaacacagacaagctcc
aaacaagaaaatccaagtaagaaagcatttaacaaaaagagaagaaagaagagaacttct
cgttaa
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