Pseudomonas mosselii: CLJ08_01465
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Entry
CLJ08_01465 CDS
T07806
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pmol
Pseudomonas mosselii
Pathway
pmol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmol00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CLJ08_01465
09124 Replication and repair
03420 Nucleotide excision repair
CLJ08_01465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmol03021
]
CLJ08_01465
03400 DNA repair and recombination proteins [BR:
pmol03400
]
CLJ08_01465
Enzymes [BR:
pmol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CLJ08_01465
Transcription machinery [BR:
pmol03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CLJ08_01465
DNA repair and recombination proteins [BR:
pmol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CLJ08_01465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ATB63366
LinkDB
All DBs
Position
complement(305047..307302)
Genome browser
AA seq
751 aa
AA seq
DB search
MSYTVAVRALCEFSAKVGDLDLRFTPSPTAQEGIAGHRRVVARRAAGYESEVALEGEYQG
LRVRGRADGYDPACNRLEEIKTHRGDLARQPDNHRLLHWAQAKVYAWLLCQARQLPAIDV
ALVYLDVDSDGQTLISERYQADDLKRFFETQCQRFLAWAQAQERRLGERDRDLGALTFPY
PEFRLGQRQLAETLYKAVSTGRCLMAQASTGIGKTLGTLFPLLKAVVPQQLDKLYFLTAK
TPGRALALDALRQITRASPQPALRSLELIARDKACEHPENACHGESCPLARGFYERLPAA
REAAAQVPLLDRASLREVALAHQVCPYYLAQEMARWVDLLVADYNYYFDAHALLFGLAQA
NQWRTAVLVDEAHNLVERGRQMYSASLDQGQLLALRQSKPAGLGSALDRLNRQWNALYKA
QVAPYQASEQLPDAFLRALQQCIGLIQERMNQAPAEVEPKVLEFFFQALQFSRIAELFDE
HFLFDISPRNGPRGRRLATLCLRNVVPARLLGPRMSAARSVTLFSATLNPRHFYSDLLGM
PADTAWLEVAAPFRAEQLQVRIVSEVSTRYQQRQASLAPIVELIAAQFTRQPGNYLAFFS
SFEYLEQVARLLAERYPALPIWCQAPGMDEAGREAFLARFVEHGQGVGFAVLGGAFGEGV
DLPGTRLIGAFVATLGLPQVNPVNEQFKQRLGRQFGAGFDYAYLYPGVRKVIQAAGRVIR
GDQDRGVLMLIDERFAEPRVRQMFPSWWQLG
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgagctataccgtggccgtacgcgcactctgtgagttcagcgccaaggtcggcgacctc
gacctgcgtttcaccccgtcgcccaccgcccaggagggcatagccgggcaccgccgggtg
gtggcgcggcgcgccgctggttatgagtcggaggtggcgctggagggcgagtaccagggg
ctgcgggtacgcggccgcgccgatggctacgaccctgcgtgcaaccgcctggaggagatc
aagacccatcgcggcgacctggccaggcagcccgacaatcaccgcctgctgcactgggca
caggccaaggtctatgcctggttgctgtgccaggcacggcaactgccggcgatcgacgtg
gcgctggtctacctcgacgtcgacagtgacggccagacgctgatcagcgagcgttaccag
gccgatgacctgaagcgcttcttcgagacccagtgccagcgctttttggcctgggcgcag
gcccaggagcgacggctgggcgagcgggaccgggaccttggcgcgctgacattcccctat
cccgaattcaggctgggccagcgccagctggccgagacgctgtacaaggccgtgagcacc
ggccgctgcctgatggcccaggccagcaccggcatcggcaagaccctcggtaccctgttc
ccgctgctcaaggccgtggtgccgcagcaactggacaagctctacttcctcaccgccaag
accccgggccgggccctggccctcgacgctctgcgccagattacccgggcgtcgccgcag
ccggcgctgcgcagcctcgaactgatcgcccgcgacaaggcctgcgagcaccccgagaac
gcctgccatggtgagtcctgccccttggcgcggggcttctacgagcggctgccggccgcc
cgcgaagccgccgcccaggtgccgctgctcgaccgcgccagcctgcgcgaggtggccctg
gcgcatcaggtctgcccctattacctggcccaggaaatggcgcgctgggtcgacctgctg
gtggccgactacaactactacttcgacgctcatgccttgctgttcggcctggcccaggcc
aaccaatggcgcacggcggtgctggtggacgaggcgcacaacctggtggagcggggacgg
cagatgtacagtgccagccttgaccagggccagttgctggcactgcgccagagcaagccg
gccggactcggcagtgccctcgaccggctcaaccggcagtggaacgcgctgtacaaggcc
caggtggcgccgtatcaagccagcgaacaactgccggacgccttcctgcgtgccctgcag
caatgcatcgggctgatccaggaacgcatgaaccaggcgcccgccgaggtcgagcccaag
gtgctggagttcttcttccaggccctgcagttcagccgcatcgccgagctgttcgatgag
cacttcctgttcgatatcagcccgcgcaacggcccacgggggcggcgcctggccactttg
tgcctgcgcaacgtggtgccggcgcggctgctggggccgcgaatgagcgcggcgcgcagc
gtcacgctgttttccgccacgctcaatccgcggcacttctacagcgacctgctgggcatg
cccgccgacacggcctggctggaggtcgccgcgccgttccgcgccgagcagttgcaggtg
cgcatcgtcagcgaggtgtccacccgctaccagcagcgccaggcgtcacttgcgccgatt
gtcgaactcatcgccgcccagttcacccgccagccgggcaactacctggcctttttcagc
agtttcgaatacctcgaacaggtggcgcggctgctggccgagcgctatccggcactgcct
atctggtgccaggcgcccggcatggacgaggccgggcgcgaggccttcctggcgcggttc
gtggagcacgggcagggggtgggcttcgccgtgctcggcggcgccttcggcgagggcgtg
gacctgcccggcacgcgcctgatcggcgccttcgtcgccaccctcgggctgccccaggtc
aacccggtcaacgagcagttcaagcagcgcctgggtcggcagttcggcgccggtttcgac
tatgcctacctgtacccgggcgtacgcaaggtgatccaggccgccggccgggtgatccgc
ggtgaccaggaccgtggcgtgctgatgctgatcgacgaacgcttcgccgagccccgggtg
cggcagatgttccccagctggtggcaactgggttga
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