Penaeus monodon (black tiger shrimp): 119572271
Help
Entry
119572271 CDS
T08784
Name
(RefSeq) aprataxin-like
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119572271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119572271
Enzymes [BR:
pmoo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
119572271
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
119572271
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
119572271
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
119572271
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
119572271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
DUF4038
RapH_N
Motif
Other DBs
NCBI-GeneID:
119572271
NCBI-ProteinID:
XP_037775210
LinkDB
All DBs
Position
4:complement(47878626..47884914)
Genome browser
AA seq
199 aa
AA seq
DB search
MATAAPSKRPAPDSTSIQPAKKAHWSQGLLASMNDPNLVVLSDDRIVIIKDKYPKARYHF
LCIPKINVKNLKSLKREQSELLRYMEEHSRILAAKYPHVEFRYGYHAIPSMSQLHLHMIS
QDFDSPCLKTKRHWNSFNTRYFLDSADVIRCLEERGMVVTMTPLAGEKLLDQPLKCHKCI
YSPQNMPKLKQHLYKHINN
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgccgcaccgagcaaaagacctgctcccgactccacttctatacagcctgct
aagaaggcccactggtcgcagggcctcctggcgtccatgaacgaccccaacctcgtcgtt
ctctccgacgaccgcatcgtgatcatcaaagacaagtatcccaaggcacgctaccatttt
ttatgcatccccaagattaatgtaaagaacctgaagtcactgaaaagagaacaaagtgag
ctgctacggtacatggaagaacactcgagaattcttgctgcaaagtatcctcatgttgaa
ttcaggtatggttaccatgcgatcccaagtatgtcacaactgcatctgcatatgatcagc
caggattttgactcaccatgtctgaaaaccaaacgccattggaattcttttaatactcgg
tacttcctagacagtgcggatgtaatccgctgtttggaagaacgtggaatggtggtgaca
atgacccccttagcaggagagaagttattagatcaaccccttaagtgccacaagtgtata
tattctccacagaatatgcccaaattgaagcagcatctttataaacacataaataactaa
DBGET
integrated database retrieval system