Penaeus monodon (black tiger shrimp): 119587405
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Entry
119587405 CDS
T08784
Name
(RefSeq) general transcription factor IIH subunit 5-like
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03022
Basal transcription factors
pmoo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119587405
09124 Replication and repair
03420 Nucleotide excision repair
119587405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoo03021
]
119587405
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119587405
Transcription machinery [BR:
pmoo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119587405
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119587405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
119587405
NCBI-ProteinID:
XP_037792071
LinkDB
All DBs
Position
22:27883066..27894891
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AA seq
108 aa
AA seq
DB search
MVNVLKGVLIKCDDPVMKQFILHLDETLKLGSRFVLVDLDECHLFVQPEVYDSLKNLIDE
QYEKVYYNQKSSLEKNHPLPWKIGIRFQGSRYAAQKGFPLMKIPGAKV
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgtattgaagggtgttctcataaaatgtgatgaccctgttatgaaacaattt
atacttcaccttgatgaaacattgaaattgggctcaaggtttgtgttggtagatcttgat
gaatgtcatctgtttgtgcagcctgaagtctatgacagtttaaagaatctcattgatgaa
caatatgagaaggtctattataaccagaagagcagcttagaaaaaaatcaccctttacca
tggaaaatcggaatcaggtttcagggatcacgatacgctgcacaaaagggttttccactc
atgaagatcccgggtgctaaagtatag
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