Petromyzon marinus (sea lamprey): 116937346
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Entry
116937346 CDS
T09614
Name
(RefSeq) transient receptor potential cation channel subfamily M member 3-like
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116937346
Ion channels [BR:
pmrn04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116937346
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRPM_tetra
Ion_trans
TRPM2
GRP
Cpta_toxin
Motif
Other DBs
NCBI-GeneID:
116937346
NCBI-ProteinID:
XP_032800303
UniProt:
A0AAJ7WKW0
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MCSEASLTDVVDDVSQELDSNSKEFGQLAVDLLDQVYRQDEQVAMRLLTYELKNWSNSTC
LKLAVAGKQRDFIAHTCSQMLLTDMWMGGLRVRKNTFLKVIMGILIPPSILALEYRGREG
AYTAGDDPPSATPDDAAGGLGAVPQRPPPRHDEHPVDTLPPPHCGDTLGGGGGGGGGGGG
GGGGGGGEDEEEGGVGAGGGWSGVRVRVRGIALLNKVYDFYSAPIVKFWFHTLAYVAYLM
LFNYVVLVRMERWPSAQEAFIIAYILTMALEKVREIVMSEPGKLSQKVKVWLQEYWNITD
AVAITVFVMGVSLRLQDQPFMSYGRVIYCVDIIFWYIRLLDIFGVNKYLGPYVMMIGKMM
IDMLYFVIIMLVVLMSFGVARQAILHPDEEPTWRLARNIFYMPYWMIYGEVFADQIDLFA
MEINPPCGDNLYDDDGKRMPRCIPGAWITPAIMACYLLVANILLVNLLIAVFNNTFFEVK
SISNQVWKFQRYQLIMTFHERPVLPPPLIILSHLSLLAKYLCCRLRRHHDGGGGGGGGGG
GGGSRAGAGAGGGRGGAAGAETDDREGALKLVLTDEEMKRLLDLEEQCVEDYFTDKEERF
TSSTDERIRITTERVENMAMRLEEVNEREHFMKASIQTVDLRLAQLEEATSRIAGALERL
APGGADAAAAAAAAAGPARLHSRSSSDGPGGGGGGGGGPGGGAGDRCRRGSVGSGGSLFR
LETPALHRRAASERRAASPSATPAPAAGVTTPPPYSFHLMHRRDRDGGAGGGGGGDGAGT
PPWPGWTPAGDGYQKERSMSLHHATSAFSVARRRSGYASAGCSFRRESGGCGFGGFGGFG
GGGGGVGVAGGSFNERRRHRLGSCIDIFVSDDSSAPPPPPAGAASSAGDHSRRRFRSASP
SPSPSASPSLSLAPADAAAAALAAASCRPEGRSASRSCPLERSKSNRYLVVAPVPGLFYG
GGAAPAAAAAAAPESPPPAAGGNGDQCDLTPTRLEPELCPLLVRSRSLMLPPPAPPPPPA
LAKSPRNSEYTTIVDCIDTSCVAGGSGGGSGGGSDERPCGSGAAGGGGGGGGRSSPDPVC
RLGVPGTLGCSQAEREAELGSTAASDAESDVDSGRSAAASQSIGERMDWPGGDAGGGSSS
SSTGAAALLRSQSQRRQRRDPGEPAETFC
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagcgaagcgtcgctcacggacgtcgtggatgacgtctctcaggagctcgatagc
aactccaaggagtttggccagctggccgtcgacctcctggaccaggtgtaccggcaggac
gagcaggtggccatgcgtctactcacgtacgagctcaagaactggagcaactccacctgc
ctcaagctcgctgtggccggcaagcagcgagacttcatagcacacacgtgcagccagatg
ctgctcaccgacatgtggatgggtgggctacgggttcgcaagaacaccttcctcaaggtg
atcatggggatcttgatcccgcccagcatcctggcgctggagtaccgtggccgtgagggc
gcctacacagccggcgacgatcctccctccgccacgcctgatgatgcagcgggcggactt
ggcgcggtgcctcagaggccgccacctcgtcacgacgagcaccctgtggacactctgcct
ccaccacactgcggggacaccctcggaggcggtggaggcggcggtggaggcggtggaggc
ggtggaggcggtggcggcggcgaggacgaggaggaggggggagttggagcggggggagga
tggagcggggtccgggtgagggtgaggggcattgccctgctcaacaaagtctatgacttc
tacagcgcccccatcgtcaagttctggttccatacgctggcctacgtagcgtacttgatg
ctcttcaactacgtggtgctggtgaggatggaacggtggccgtcggcccaagaggctttc
atcatcgcctacatcctcacgatggcgctggagaaagtcagagagatcgtgatgtcggag
cccggcaagctctcgcagaaggtgaaggtttggctgcaggagtattggaacatcacggac
gccgtggccatcacagtgttcgtgatgggtgtctcgctgcggcttcaggatcagcccttc
atgagctacggccgtgtcatctactgtgtggacatcatcttctggtacattcgcctgctc
gacatattcggcgtcaacaagtacctggggccctacgtcatgatgatcggcaagatgatg
atcgacatgctgtacttcgtcatcatcatgctcgtggtgctgatgagcttcggcgtggcg
agacaggcgatcctgcaccccgacgaggagccgacatggcgcctggccaggaacatattt
tatatgccctactggatgatctacggcgaggtcttcgctgatcagattgacctgttcgct
atggagatcaatccgccgtgtggcgacaatctctacgatgacgacggtaagagaatgccg
cggtgcatccccggagcttggatcacgccggccatcatggcctgctacctcctcgtcgcg
aacatcctcctcgtcaacctcctcatcgccgtcttcaacaacaccttcttcgaggtgaaa
tccatctcgaaccaggtgtggaagttccaacgctaccagctgatcatgaccttccacgag
cgtcccgtgctcccaccacctctcatcattctctcccacctgagcctcctcgccaagtac
ctctgctgccgtctcaggcgtcaccacgatggaggtggtggtggtggcggcggtggcggt
ggtggtgggagtcgtgcaggagcaggagcaggaggaggaagaggaggagcagcaggagcc
gaaacggacgatcgcgaaggagctctgaagctggtgctgaccgacgaggagatgaagagg
ctgctggatctggaggagcagtgcgtggaagactacttcactgacaaagaggaacgattc
acctcctcgaccgatgagcggatccgcatcaccacggagagggtggagaacatggcgatg
cgcctcgaggaggtgaacgagcgcgagcacttcatgaaggcctcgatccagacggtggac
ctgcggctcgcccagctcgaggaggccacgtcccggatcgccggcgccctcgagcgcctg
gcgccgggcggcgccgacgccgccgccgccgccgcggccgccgccgggccggcccggctg
cactcccgcagctcgtcggacggtcccggcggcggcggcggcggcggcggcggccccggc
ggaggagcgggagaccgctgccgccgcggtagtgtcggcagcggcggcagcctcttccgc
ctggagacgccggcgctccaccgccgggccgcctcggagcgccgggcggcgtctcccagc
gcgacgccggcgccggccgccggcgtgacgacgccgccgccctactcctttcacctgatg
caccggcgcgaccgggacggcggcgccggcggcggcggcggcggcgacggcgccggcacg
ccgccctggcctggctggacgccggccggcgacggctaccagaaggagcgctccatgagc
ctgcaccacgccaccagcgccttctcggtggcccgccgccgcagcggctacgccagcgcc
ggctgcagcttccgccgggagtccggcggctgcggcttcggcggcttcggcggcttcggc
ggcggcggcggcggcgtcggcgtcgccggcggctccttcaacgagcgccggcggcaccgc
ctcggctcctgcatcgacatcttcgtgtcggacgactcttcggctccgccgccgccgccg
gcgggcgcggcgtcgtcggcgggcgaccactcccgccggcgcttccgctcggcgtcgccg
tcgccgtcgccgtcggcgtcgccctccctctcgctggcgcccgccgacgcggccgcggcc
gccctcgcggccgcctcctgccgcccagagggccgctcggcgtctcgctcctgcccgctg
gagcgctccaagagcaaccgctacctcgtggtggcgcccgtgcccggcctcttctacggc
ggcggggcggcgccggcggcggcggcggcggcggcgccggagtcccctccgcccgccgcc
ggcggcaacggcgaccagtgcgacctgactccgacgcgtctcgagcccgagctgtgcccg
ctgctggtccgctcgcgcagcctcatgctgccgccgccggcgccgccgccgccgccggcg
ctcgccaagtcgccgcggaactccgagtacaccaccatcgtggactgcatcgacaccagc
tgcgtcgccggcggctccggcggcggctccggcggggggagcgacgagcggccgtgcggt
tcgggggccgcgggcggcggcggcggcggcggcggccgctcgtcgccggaccccgtgtgc
cgcttgggcgtccccggcaccctgggctgctcgcaggcggagcgcgaggccgagctgggt
agcacggccgcgtcggacgccgagtccgacgtggactcgggccgctcggcggcggcgagc
cagtccatcggggagaggatggactggcccggcggcgacgccggcggcggctcctcctcc
tcctctaccggcgcggccgcgctgctgaggagccagtcccagcgcaggcagcggcgagac
cccggtgaacccgccgagactttctgctga
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