Petromyzon marinus (sea lamprey): 116938683
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Entry
116938683 CDS
T09614
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116938683
Ion channels [BR:
pmrn04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116938683
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
Neur_chan_memb
GPHH
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
116938683
NCBI-ProteinID:
XP_032802055
UniProt:
A0AAJ7WLJ3
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Position
4:complement(13548496..13640351)
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AA seq
2007 aa
AA seq
DB search
MAAPVLLPPGPHSLRRFTPESLAAIEQRAAHEQAKKAKGFESEDDQPKPSSDLEVGKSLP
FMYGDMPPECVAEPLEDLDPFYSTQKTFIVLNSGKAIFRFSATPALYILTPFNPVRRYAI
KILTHSLFSIFIMFTILTNCVFMTMSEPPTWTKNVEYTFTGIYTFESMVKILARGFCLHP
FTFLRDPWNWLDFCVIVMAYVTEFIDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
AVKQLSDVMILTVFCLSVFALIGLQLFMGNLRHKCILWPIANQTNVTEFNETAEPFNWEN
YVNNEDNQYKLEGSKDALLCGNGSDAGSCPEKFVCVKGGRNPNYGYTSFDTFSWAFLSLF
RLMTQDYWENLYQLTLRAAGKPYMIFFMVVIFLGSFYLINLILAVVAMAYEEQNQATMQE
ADKKDREFQAMMEQLKRQQEDLGNGGGTADSEPLSRSSSEESRLSSKSANESRNQRKKQR
QKSDSEEGEEKRDDEKIPKSVSEESMLRKPGSLRGSRKYSTHRESLISMYYKPKRKSSRT
SLLSFREKVRDHNSDNDFADDEQSELQSMAGEAGSRRNSLFVPQRGHGERRNSQGSKLSW
AGPNPPILPPLNGKMNVSVDCNGVVSLVDRPAGTSVPNSPPGLLLPEVVIDKAVTDDNAT
TETELLKKRRRGSQHTSMDLLEEPVIIRNRAYSAISVLTNTMEELEESRQNCPPCWYKFA
NKYLIWECCSLWMKVKEILKMIVMDPFVDLSITICIILNTLFMALEHYPMTPEFDNALFV
GNLVFTGIFTAEMVLKIAAQDPYYYFQQGWNIFDSIIVSLSLMELGLSSVDGLSVLRSFR
LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKMYKECVCK
ISENCTLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLV
VLNLFLALLLSSFSGDNLSATDDDGEMNNLQVAIGRIERGVSFIKRSICDVFRKALKRSC
DNEEMKALDDLGGLDKMEIYVGNHTGVQGESIVKDGNGVASGAAGVGNSLKNHHVLDVDR
LGFLTNPNLGVRVPIAVGESDFENRDEEDEDDDNQTTESGMDESKEKLDTVSSSEGSTVD
IQKEGVVEVPVELVEEMMEPEECFTEGCLHRFPYCRLDVGTDRGRSWWNLRRACYRIVEH
NWFESVIVFMILLSSGALAFEDIYIEQRKTIKTVLEYADKVFTYVFILEMLLKWVAYGFQ
KYFTNAWCWLDFLIVDVSLVSLVANAMGYSELGAIKSLRTLRALRPLRALSRFEGMRVVV
NALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFSGKYYYCLNKTDGQRLPISIVDNYSMCI
ALNDTTNETLWKNVKVNFDNVGIGYLALLQVATFKGWMDIMYAAVDSRDVKEQPSYEINL
YMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGEDIFMTEEQKKFHNAMKKLGSK
KPQKPIPRPGNKLQGAVFDFVTKQVFDILIMILICLNMVTMMVETDNQSIEMENILFSIN
LVFIVVFTGECVLKMLALRQYYFTIGWNIFDFVVVILSIVGIMLADMIQKYFVSPTLFRV
IRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKK
ESGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGVPDCDPEIEHPGSLVKGDCG
NPMVGIIFFVSYIIISFLVVVNMYIAIILENFSVATEESSEPLSEDDFEMFYEIWEKFDP
DATQFIAWERLPDFADALDEPLRVPKPNKIKLIAMDLPMVINDRIHCLDILFAFTKRVLG
EGAGMDALKTQMEDRFMAANPSKTSYEPITTTLRRKQEEVAVRVIQRAYRRHILHRSLKQ
ASYIYRHRKSDGNILEEEAPEKDGLIARNMRANFSTDCEYGDSSTITPPPSFESLELMDN
TNKHGGYNDEDPKERDIEGKDIRESIV
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atggcagccccagtgctgttaccgcctggaccgcacagtctgcgccgcttcacgcccgag
tccctggccgccatcgagcagcgcgcggcccacgagcaggcaaagaaagccaagggcttc
gagagcgaggacgaccagcccaagcccagcagcgacctggaggtcggcaagtcgctgccg
ttcatgtacggcgacatgccgcccgagtgcgtggccgagccgctggaagacctggatccc
ttctacagcacgcagaagacatttatagtcctgaattcagggaaggccatcttccgattc
agcgccacacctgcattgtatattttaactccgttcaaccccgtcagaagatacgctatc
aagattttaacacattcgcttttcagtatattcataatgttcaccattctaaccaactgt
gtcttcatgaccatgagcgagccacccacttggaccaagaacgtggaatacacattcaca
ggaatctataccttcgaatccatggtgaaaatcctggctcgtgggttttgccttcaccct
tttacattcctgcgcgacccttggaactggctcgacttctgcgtcatcgtcatggcgtac
gtcacggaatttatcgacttgggcaatgtctcggccttgagaacgttcagggttctccga
gccctcaaaaccatctccgttattccaggcctaaagacgatcgtaggtgccctcatccag
gcggtgaagcagttgtcggacgtgatgatcctcaccgtattctgcctgagcgtgttcgcg
ctcatcggcctgcagctcttcatggggaacctgcggcacaagtgcatcctctggccgatt
gccaaccagaccaatgtcacggagttcaacgagaccgccgagcccttcaactgggaaaac
tacgtcaacaacgaagataatcagtacaaactggaagggagtaaggatgctctcctgtgt
ggaaatggatctgatgccggttcctgtccagagaagttcgtctgcgtcaagggaggacgc
aaccccaactatggctacacgagcttcgacaccttcagctgggccttcctgtcgctgttc
cgcctcatgacgcaggactactgggagaacctctaccagctgactctgagggcagctggc
aagccgtacatgatcttcttcatggtggtcatcttcctgggctccttttacctcatcaac
ctcatcctggccgtagtagccatggcctacgaggagcagaaccaggccaccatgcaggag
gccgacaagaaggaccgtgagttccaggccatgatggagcagctcaagaggcagcaggag
gatctggggaatggggggggcacagcggacagcgagcccctgtcccggagctcatccgag
gagtcacgcctgagctccaagagcgccaatgagagcaggaatcagagaaaaaagcagagg
cagaagagcgactcggaggagggggaggaaaagagagacgacgagaagatccccaagtcg
gtgtcggaggaaagcatgctccgcaagccgggcagtctacgcggcagccgcaagtactcg
acgcaccgagagtccctgataagcatgtactacaagccgaagaggaagagcagccgcacg
agcttgctcagcttccgagagaaggtgcgcgaccacaactccgacaatgactttgccgac
gacgagcagtcggagctgcagagcatggccggggaggccggcagccggcgcaactcgctg
ttcgtgccgcagagaggccacggcgagaggcgcaacagccagggcagcaagttatcttgg
gccgggccgaacccgcccatcttgccaccgctcaacggcaagatgaacgtgtcggtggac
tgcaacggggtggtgtcactcgtcgaccggccagccggaacttcggttcccaactcgcct
ccggggctgctgctgcctgaggtggtcatcgacaaagccgtcacggatgacaatgccaca
actgaaacggagctgctgaagaagaggaggcgtgggtcccagcacacctccatggacctc
ctggaggagccggtgataatacggaacagggcatacagcgccatcagcgtgctcaccaac
accatggaagagctggaggagtcgaggcaaaattgccccccgtgctggtacaagtttgcc
aacaaatacctcatctgggagtgctgctcactctggatgaaggtgaaggagatcctcaag
atgatcgtcatggaccccttcgtggacttgtccatcaccatatgcatcatcctcaacacc
ctcttcatggccttggagcactaccccatgaccccggagtttgataatgccctgttcgtg
ggaaacctggtgttcacgggaatattcacggcagagatggtgctgaagattgcggctcaa
gatccttactactacttccagcagggctggaacatcttcgacagcatcattgtcagcctc
agcctcatggagttgggcctgtcttcggtggacggtctctctgtgctgcgctccttccgc
ctcctccgcgtgttcaagctggccaagtcgtggcccacgctcaacatgctcatcaagatc
atcggcaactcggtgggcgccctcggcaacctgacgctggtgctggccatcatcgtcttc
atctttgccgtggtggggatgcagctctttggcaagatgtacaaggagtgcgtgtgcaag
atcagcgagaattgcactctgcctcgctggcacatgcacgacttcttccactcgttcctc
atcgtgttccgtgtgctctgcggcgagtggatcgagaccatgtgggactgcatggaggtg
gccggccaggccatgtgcctcatcgtcttcatgatggtcatggtcatcggcaaccttgtg
gtgctcaacctcttcctggcgctgctgctgagctccttcagcggcgacaacttgtcagcc
acggacgacgacggtgagatgaacaacctgcaggtggccatcggccgcatcgagcgtggt
gtctccttcatcaagcgttccatctgcgacgtcttccgcaaggcgctcaaacgcagctgt
gacaacgaggagatgaaggccctggatgacctcggaggccttgacaagatggagatctat
gtggggaaccacacgggcgtgcagggagagtcaatcgtgaaggatgggaatggcgtggcg
agcggcgccgccggcgtggggaacagcttgaagaaccaccacgtgctggacgtcgatcgt
ctcggcttcctcaccaaccccaacctgggcgtgcgcgttcccatcgccgtgggcgagtcc
gacttcgagaaccgtgacgaggaggacgaggatgacgacaaccagaccacggagtctggc
atggatgaaagcaaggagaagttggacacggtgagctcgtccgagggcagcacggtggac
atccagaaggagggagtggtggaggtccccgtggagctcgtggaggagatgatggagcca
gaggagtgcttcacagaaggctgcctgcaccgcttcccgtactgccgcctggacgtgggc
acggaccgcgggaggtcctggtggaacctgcgccgtgcctgctatcgcatcgtggagcac
aactggtttgagtcggtcatcgtgttcatgatcctgctcagcagcggcgccctggccttt
gaggacatttacatcgagcaaaggaagacgatcaagacagtgctggagtacgctgacaaa
gtcttcacctacgtcttcatcctggagatgctgctcaagtgggtggcctatggcttccag
aagtacttcaccaacgcgtggtgctggctcgactttctcatcgttgatgtgtctttagtc
agtctcgtagctaatgccatgggctactcggaactgggcgccattaagtcccttaggacg
ctaagagcactgaggcccttgagggccctgtcacgatttgaagggatgagggtggtggtg
aacgcgctcgtgggcgccatcccctccatcatgaacgtgctgctcgtgtgcctcatcttt
tggctcatcttcagcatcatgggggtcaacctgttctcggggaagtactactactgcctc
aacaagacggacggccagcggttgcccatctccatcgttgacaactacagcatgtgcatc
gcgctcaatgacaccaccaacgagacgctgtggaagaacgttaaggtcaatttcgacaac
gttggcatcggttatctcgccctgctgcaagtcgccacatttaagggctggatggatatc
atgtatgcagcagtggattcccgtgatgtaaaggaacagccgtcctacgagatcaacctt
tacatgtacctctacttcgtcatctttattatcttcggctcatttttcactctcaatctc
ttcatcggtgtcatcatcgacaacttcaaccagcaaaagaaaaagtttggaggggaggac
atcttcatgacagaagagcagaagaagttccacaatgccatgaagaagctgggctcgaaa
aaaccacagaagcccattccgaggcctgggaacaagctccagggagcggtcttcgacttt
gtgacgaagcaagtatttgacatcctcatcatgatcctcatctgcctcaacatggtgacc
atgatggtggaaaccgacaaccagagcatcgagatggagaatatcctcttcagtatcaac
ctcgtcttcatcgtcgtcttcacaggggagtgcgtgctcaagatgcttgctcttcggcag
tactacttcactatcggatggaacatcttcgactttgtggttgtcatcctctccatagtc
ggcatcatgctggcagacatgatccagaaatattttgtgtcgccaacacttttccgagtt
atccgcttagcccggattggacgaatcctacgtctcatccgaggtgccaagggaatccgt
acgctgctctttgccctcatgatgtccctccccgccctcttcaacattggcctcttgctc
tttctcgtcatgttcatctactctatcttcggcatgtccaacttcgcctatgtgaaaaag
gagtccggcattgacgacatgtttaactttgagacatttggcaacagcatgatctgccta
tttcaaatcaccacttcagctggctgggatggtctcctcgccccaatcctgaacagcggt
gtcccggactgtgaccctgaaattgagcacccaggcagcctggttaagggcgactgtggg
aaccccatggtcgggattatatttttcgtcagctacatcatcatctctttcctggttgtg
gtcaacatgtacatcgccatcatcctcgagaacttcagcgttgccacggaggagagttca
gagccattgagcgaagacgacttcgagatgttctatgaaatctgggagaagttcgaccca
gatgccacccagttcatcgcctgggagaggttgccagactttgccgatgccttagatgag
ccgctcagagttcccaaaccaaacaagatcaagctgattgcgatggatctgcccatggtg
attaacgacaggatccactgcctggacatcttgttcgcgttcacgaaacgtgtgctgggt
gagggcgccggcatggacgcgctcaagacccagatggaggaccgcttcatggcggccaac
ccctccaagacttcgtacgagcccatcaccaccacgctgcggcgcaagcaggaggaggtg
gctgtgcgcgtgatacagcgcgcgtacaggcgccacatcttgcaccggtccctcaagcaa
gcctcctacatctaccggcaccggaagagtgacggaaacatcctggaggaggaagcgccc
gagaaggacgggctcatcgcgaggaatatgcgcgccaacttctccaccgactgcgagtac
ggtgactcctccaccattactcccccgccttcatttgaaagcttggaactaatggataac
acaaacaagcacggtggatacaacgatgaggaccccaaggagagggacatcgaagggaag
gacattcgtgaatcgatagtatag
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