Petromyzon marinus (sea lamprey): 116940216
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Entry
116940216 CDS
T09614
Name
(RefSeq) rap guanine nucleotide exchange factor 2-like isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04010
MAPK signaling pathway
pmrn04517
IgSF CAM signaling
pmrn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116940216
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116940216
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116940216
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
PDZ
RA
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116940216
NCBI-ProteinID:
XP_032805557
UniProt:
A0AAJ7SU18
LinkDB
All DBs
Position
8:complement(4706953..4953171)
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AA seq
1687 aa
AA seq
DB search
MSSYVDQEFREALMRSPAERKTQELEIIYSYLHGMEALSNLREPQLRSLCKLVRYEQHEA
NYVLYFPEDVSSCWYILLSGSVFIDGSMFLPRSSFGKRSVSSLQRGTECIVLEPSEMIVV
DYVDESEDGLQRPDALRQSRRRFRRINQRGERQTIIETMDNLQANLLRGYHTDPLHGQLP
ADSNKMHHAGEGLHRPVTASLSGCSIASESESSSLSDIFQTESELGDMDLTGLTETVVDS
DEDDEEDLDQASMSVSSRDMVRDCLEKDPADRTDDDIEQLLEFMHQFPAFANMTMSVRRE
LCASMVFAVVEKAGTVVLRDGEELDSWCVILNGSVEISRADGRTETLCMGNCFGVSPSME
KELMTGVMKTKVDDCQFVCIAQKDYCRILNKVERNMQKVEEEGEIVMVKEHRELDRTGTR
KGHIVIKGTPERLINHLVEEHSVVDPTYVEDFLLTYRTFQPHGLDIGKRLLQWFNDSSLR
DKVTRVVLLWVNNHFNDFESDPDLMQFLENFESCLEREKMHGHLRLLNIACAAKARVRHV
TVRRASRESPLGFKLDGGQDRGFPLYVSSLDLQSKASESGLKRGDQILEVNGQNFDNVLL
SQAMDIMKKSTHLSITVKNNLLSYKEICHRLEEEQTSGVQHKPRIADKRYSIPDLTVQLE
LPPGHERSKDKKGNSMGKSKLKKLMTKSKINLLPTKPSSEVAVTQDDIVLGVKAPRPCPA
PLPTPASLSSSNPDLVQCHGTAELGTAPDGIPVNIPDQVVKVYRADQSSRYVMVSRESSA
REVVLAALREFQVCEAAEAYSLCEVSVSPEGFIKQRRLPDHLNKLAESIQLNARYYLKNN
SQTEPLCSDEHAQELLKESQISLLQLSTLEVATQISIRDFQIFRSIEPTEYVANLFRLGG
AAACEHLQAFEETLNRETFWVPSEVLRETGLLKRVKLIKHYLKIALNCRDSRNFNSMFAI
ISGLSHSSVMRLRSAWDKLPSKYEKLFSDLQDLFDPSRNMAKYRNLLSSPSLQPPIIPLF
PVVKKDLTFLHDGNDSRVEGLVNFEKLRMIAKEVRHVGRLASANQDPAVMFRHRKRKWKR
LGSLSQGSTGSALEAAQASGHKKRQRRSSFLNAKKLYEEAQMARRVRQYLACLVVERDED
QLQIMSLQCEPASNTLPRAADKKVQKTESSPGSSRSAPAKQQAVPAVTLHPSGRAVPVSS
LPPFGITSHQSLQKILSLSEEANQDKHKHKSEDSLSITSSQSDPSASPHNSPRRVAIRLK
RQGSHHSDMGPSSSMASENSNRNNNAARANSFGCMNSTQTEMTGDPGANLMSDRTSLHSY
TLCSQCQQGVCLRHPASRECADRVSVAPMLDSGRSSWTSCSSGSNDNIQVVQRKKSWDDH
AGSLPENSESPPGSRVTHLHAEVPASKPPAPHAGRAPGSSLAAKPPASAPAPAEGRAAAP
PACGERDASASPEHPRKAKKHPEATQSSARPLVYGGKAAEQVLKIRQLKQHSHDMLMPTH
HRRAPSEDVQAAEVADRAPDVNGGERGGGSLERRGPRDGNGACRSSPVVRSKSVDSSGAR
DASPAAPPAPEGAAQPRGAGAGDARKRVPPPAPPGYVASQGERRPPDYSVAVQRSRLVNC
SADSPLGQRPRSTLPPEHPLLTSGRASALSSPQRASPVHGQHTSVTARPLSYQPLPPPAD
EEQVSAV
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctacgtggaccaggagtttcgagaggcgctcatgaggagcccggccgagagg
aaaactcaggagctggagataatatactcttacctgcatgggatggaggcgctatccaat
ctgcgggagcctcaactaaggtctctgtgcaagctggttcgctacgagcagcacgaagcc
aactacgtcctatacttccctgaggatgtgagcagctgctggtacatcctgctgtcgggc
tcagtgttcatcgacggctccatgttcctgcctcgcagcagctttggcaagcggtcagtg
agcagcctccagagagggacagaatgcatcgtgctggagccctccgaaatgatcgtggtg
gactatgtggatgagagcgaggacggccttcaacgccccgacgcgctgcgccagtcgcgg
cgtcgcttccgccgcattaaccagcgaggagaacgacagaccatcattgagaccatggac
aacctgcaggccaacttacttcgcggctaccacacggaccccctgcacggccagctccca
gccgattcgaacaaaatgcaccatgccggggaggggctccaccggcccgtgacggccagc
ctgtcaggctgcagcatcgccagcgagtcggagagcagcagcctctcagatatcttccag
acggagagcgagctgggcgacatggacctgacgggcctcacggagaccgtggtggactcg
gacgaggacgacgaggaggacctggaccaggcgtccatgtcggtgtcgagccgcgacatg
gtgcgcgactgcctggagaaggaccccgcagaccgcaccgacgatgacatcgagcagctg
ctcgagttcatgcaccagttcccggcgttcgccaacatgaccatgtcggtgcggcgcgag
ctgtgcgcctccatggtgtttgccgtggtggagaaggccggcaccgtggtactgcgcgat
ggagaggagctggactcgtggtgcgtaatcctgaacggctcggtggagatcagtcgcgcc
gatgggcgcaccgagacgctgtgcatgggcaactgcttcggggtgtcgccttccatggag
aaggagctcatgaccggcgtcatgaagaccaaagtggacgactgccagtttgtgtgcata
gcgcagaaggattactgccgcatcctcaacaaggtggagcgcaatatgcagaaggtggag
gaggagggcgagatcgtcatggtgaaggaacaccgcgagctcgaccgcaccggcacgcgc
aagggccacatcgtcatcaagggcacccccgagagactcatcaatcacctggtggaggag
cactcggtggtggaccccacctatgtggaggacttcctgctcacctaccgcacgttccag
ccccacggcctcgacatcggcaagcgtctgctgcagtggttcaacgactccagcctacga
gacaaggtgacccgggtggtgttgctctgggtgaacaaccacttcaacgacttcgagtcc
gaccctgacctcatgcagttcttggagaactttgagagctgcctggagagagagaagatg
cacggccacctgcggctgctgaacatcgcgtgcgcggccaaggcgcgcgtgcgccacgtg
acggtgcgacgggcgtctcgcgagtccccgctgggcttcaagctcgacggcgggcaggac
cgcggcttcccactctacgtctcctccctggacctgcagagcaaggccagcgagagcggc
ctcaagcgtggagaccagattctggaggtgaacggtcagaactttgacaatgtgctgttg
tcacaagccatggacatcatgaagaagagcacccatctctccatcaccgtcaagaacaac
cttctcagttacaaggagatctgccaccggctggaggaggagcagacgagtggcgtgcag
cacaagcctcgcatcgccgacaagcgctactccatccccgacctcaccgtgcagctcgag
ctgccgcccggccacgagcgctccaaggacaagaagggcaactccatgggcaagagcaag
ctcaagaaactcatgaccaagtccaagatcaatctcctgcccaccaaaccatccagcgag
gtggcggtcacccaggacgacatcgtgctgggcgttaaggccccgcggccgtgccccgcg
ccgctgcccacgcccgccagcctctcctcctcgaaccccgacctcgtgcagtgccacgga
acggcggagctcggcaccgcaccagacggaattcctgtcaacatcccagaccaggtggtg
aaggtgtatcgggcggaccagagcagccgctacgtgatggtgagccgcgagagcagcgcc
cgcgaggtggtgctggcagccctgcgcgagttccaggtgtgcgaggcggccgaggcctac
tcgctgtgcgaggtgtccgtcagccccgagggcttcatcaagcagcgacggctgcccgac
cacctcaacaagctggcggagagcatccagctgaacgcacgctactacctgaagaacaac
tcccagacggagccactgtgctccgacgagcacgcccaggagctgctcaaggagagccag
atatcgctgctccaactgagcacgctcgaggtggccacgcagatctccatccgcgacttc
cagatcttccgcagcatcgagcccacggagtacgtggccaacctgttccgcctgggcggt
gcggccgcctgcgagcacctgcaggccttcgaggagaccctcaaccgcgagaccttctgg
gtgccgtcggaggtgttgcgcgagacgggcctgctcaagcgagtgaagctcatcaagcat
tatctcaaaatcgcactcaactgccgggacagccgcaacttcaactccatgttcgccatc
atcagtgggctgagccactcgtcggtgatgcgcctgcgcagcgcctgggacaagttgcca
tccaagtacgagaagctgttctccgacctgcaggacctgtttgacccctcgcgcaacatg
gccaagtaccgcaacctcctgagcagtcccagtttgcagccgccaatcatcccactgttc
ccggttgtcaagaaggatctgacctttctgcacgacgggaacgactcgcgcgtcgagggc
ctggtcaacttcgagaagctgcgcatgatcgccaaggaagtgcggcacgtggggcgcctg
gcctcggccaaccaagaccccgccgtcatgttccgtcaccgcaagaggaagtggaagagg
ctggggtcgctgagccagggcagcaccggctcggcgctggaggccgcgcaggccagcggc
cacaagaagcgtcagcgacgcagctccttcctcaacgccaagaagctgtacgaggaggcg
cagatggcgcggcgcgtgcgccagtacctggcgtgcctcgtggtggagcgcgacgaggac
cagctgcagatcatgtcgctgcagtgcgagcccgcgagcaacaccctgccgagagcggcc
gacaaaaaggtacagaagaccgagtcgtccccgggcagctcgcgctccgcccctgccaag
cagcaggccgtgccggccgtcacgctgcacccgtcgggccgcgccgtgcccgtcagctcg
ctgccgcccttcgggatcacttcgcatcagtccctgcagaagatcctttcactgtcggag
gaggcgaaccaggacaagcacaagcacaagtcggaggattccctgtccatcacctcctcg
cagtccgacccctcggcatcgccgcacaactcgccccgcagagtggccattcggctcaag
aggcagggctcgcaccactctgacatgggccccagctcctccatggccagtgagaacagc
aaccgcaacaacaacgccgcccgcgctaacagcttcggctgcatgaactccacccagacg
gagatgaccggagacccgggggcgaacctgatgtcagaccgcaccagcctgcacagctac
acgctctgctcgcagtgccagcagggcgtgtgcctgcgacaccccgcgtcacgggagtgc
gcggaccgcgtgtcggtggcgccgatgctggacagcggacgcagcagctggacgtcgtgc
tccagcggctccaacgacaacattcaggtcgttcagcgcaagaaatcgtgggatgaccac
gcggggtccctccccgagaactccgagtccccccccggctcgcgcgtcacgcacctccac
gccgaagtgccggcctccaagccgccggccccgcacgccggccgggccccgggcagctcc
ctcgccgccaagccgcccgcgagcgccccggcgccggcggaggggagggccgccgcaccg
cccgcgtgcggcgagcgggacgcatcggcatccccggaacacccgaggaaagccaaaaag
cacccggaggccacgcagagctccgcacggccgctggtctacggcgggaaggcggcggag
caggtgctgaagatcaggcagctcaagcaacacagccacgacatgctcatgccgacgcac
cacaggcgggcaccgtccgaagacgtccaggcggcggaggtcgcggaccgggccccggac
gttaacgggggagagaggggaggtgggagcctggagaggcgaggacccagggacgggaac
ggggcgtgtcgctcctcgccggtcgtgcgcagcaagtcggtggactcgagcggcgcccgc
gacgcctcgccggccgccccccctgcgcccgagggagccgcacagccccgcggtgccggt
gcgggagacgcgcgcaagagggtgccgccgccggcgcccccgggctacgtggcctcgcag
ggcgagcgccggcccccggactacagcgtggccgtgcagcgctcgcgcctcgtcaactgt
agcgccgactccccgctggggcaacgcccgcgcagcaccctgccccccgagcaccccctg
ctcacgtccggccgcgcgtcggcgctgtccagcccccagcgcgcctcccccgtgcacggg
cagcacacgtcggtgacggcgcgaccgctgtcgtaccagccgctcccgccgccggcagac
gaggagcaggtttcagccgtttga
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