Petromyzon marinus (sea lamprey): 116947362
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Entry
116947362 CDS
T09614
Symbol
CRNKL1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116947362 (CRNKL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116947362 (CRNKL1)
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116947362 (CRNKL1)
Spliceosome [BR:
pmrn03041
]
Complex B
Other components
Prp19-related factors
116947362 (CRNKL1)
Complex C
116947362 (CRNKL1)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
116947362 (CRNKL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
116947362
NCBI-ProteinID:
XP_032818892
UniProt:
A0AAJ7TJ93
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All DBs
Position
29:11657141..11672730
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AA seq
801 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPADLQITAEQLLREAKERELELLPPPPRQKISDEEELAD
YKLRKRKTFEDNIRKNRTVVTNWIKYAQWEESLKEIQRARSLYERALDVDHRNVTLWLKY
AEMEMKNRQVNHARNIWDRAVTILPRINAFWYKYTYMEEMLSNVAGCRQVFERWMEWEPE
EQAWHSYINFELRYKEVDAARAVYEKFVMVHPEIKNWIKYARFEDRHGYTAHARRVYERA
VEFYGEEHMKEPLFVAFARFEEAQKEFDRVRVIYKYALDRIPKQSSQELFKNYTMFEKKY
GDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDCEVESVREVYERAIANVP
LLPEKRHWRRYIYLWINFALFEELEMKDPDRTRQVYQGCLELIPHKKFTFSKIWLLFAQF
EIRQKNLTAARKILGMSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFAPENCTT
WMKFAELETILGDVERSRAIYELAVGQPRLDMPEVLWKSYIDFEIEQEECSRTRNLYRRL
LQRTQHVKVWISFAKFELSVEGKERVSRCRRVYEEGNRSLRSCEEKEERVMLLEAWRDFE
DPFGNEDSRERVQKLMPSRVKKRRKVQTDDGSDAGWEEYYDYIFPEDSANQPNLKLLSMA
KMWKQHQYMEAHGIASTAQGAPQWVDEPVEEDEQRDSDAQTSVQRQPGNEKGTVTARDTS
DEDDGGDGREERESVATGEGDSGSVNEEEGESSGETSKKTPIDMEVGGGDDELVSKKAIK
KEQENIGDRDPDKDRDETEDS
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgacggccgcggggaagcagcgaatcccgaaggttgcgaaggtgaagaacaaa
gcaccggccgacctgcagatcacagcggagcagctgcttcgcgaagccaaggagcgagag
cttgaactcctgccgccaccgccgcgccagaagatatccgacgaagaggagcttgcagat
tacaagctgcgcaagcgcaagacatttgaggataatatcaggaagaatcggacagtggtc
acaaattggataaagtacgcacaatgggaggagagcttgaaagaaattcaaagagcacgc
tctttatacgagcgtgctctggatgtggatcaccgcaacgtgacactctggctcaagtat
gccgagatggagatgaagaaccgacaagtgaaccatgcacgcaacatctgggatcgtgcg
gtcaccatcctgccacgaatcaacgcattctggtacaagtacacatacatggaggagatg
ttgagtaatgtggcaggctgccggcaagtgtttgagcgctggatggagtgggagccggag
gaacaggcctggcattcttacatcaacttcgagctccgctacaaggaggtggacgcagcc
cgtgcagtctacgagaaatttgtcatggtgcatcccgagataaagaactggatcaagtat
gcccgcttcgaggaccggcacggctacacggcacacgcacgccgcgtgtacgagcgagcc
gtcgagttctatggcgaggagcacatgaaggagccgcttttcgttgccttcgcccgcttc
gaagaagcccagaaagagtttgaccgcgtgcgcgtgatatacaagtatgccttggatcgt
ataccgaagcagtcatctcaagagctcttcaagaactacaccatgtttgagaagaagtac
ggcgaccgccgcggtattgaggacgtcatcgtcagcaagcgccgcttccagtacgaagag
gaggtcaaggcaaacccgcacaactacgacgcctggtttgactacctgcgcctggtggag
agcgactgcgaggtggagtccgtgcgcgaggtgtacgagcgcgccatcgccaacgtccct
ctgttgccagagaagcgccactggcgtcgctacatttacctgtggatcaacttcgcgcta
ttcgaggagctggagatgaaggatccagatagaacaagacaagtttaccaaggctgtctg
gagcttatcccacacaaaaagttcaccttcagcaagatctggctgctgtttgcacagttt
gagattcggcaaaagaacctcacggctgctcgaaaaatcctcggcatgtcgattggcaag
tgcccaaagaacaagctgttcaaaggctacattgagctggaactccaactgcgggagttt
gaccgctgtcggaagctctacgagaagttcttggagtttgcgcctgagaactgcacgacg
tggatgaagtttgcggagctggagaccatcctgggagatgtggagcgctcgcgagcaatc
tatgagctggcagtggggcagccacgcctcgacatgcccgaggtgctgtggaagtcctac
atcgactttgagatcgaacaggaggagtgttccaggacacggaatctgtaccgccgcctc
ttgcagcgcacacagcacgtcaaggtatggataagcttcgccaagtttgagctgtcggtg
gagggcaaagaacgcgtctcgcgttgccggcgtgtgtacgaggaaggcaatcgctcgctg
cgcagctgcgaggagaaggaagagcgagtgatgctgctggaggcatggcgcgacttcgaa
gatccgttcggcaatgaagacagccgcgagcgggtgcagaagctgatgcccagccgtgtc
aagaaacgcagaaaggttcagacggatgacgggtcggatgctggctgggaggagtattac
gactacatcttccctgaagactcggccaaccagcctaatcttaagctgttgtccatggcc
aagatgtggaagcaacaccagtacatggaggctcatggcatagcatctactgcccagggg
gcaccacagtgggtagatgaaccagtggaagaggatgagcaacgagacagcgatgcacag
acgagtgtccaacgacagccaggaaatgagaaaggtaccgtgacagctcgggataccagt
gacgaagatgatggtggtgatggtcgtgaagaaagagaaagtgttgccactggtgaagga
gactctggtagcgtcaacgaagaggaaggcgagtcttcaggagagacgagcaagaaaacg
ccaatagatatggaagtgggtggtggtgatgatgaattggtttccaaaaaagcaataaag
aaggagcaggagaacattggtgacagagacccagacaaagaccgggatgagactgaggac
tcgtga
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