Petromyzon marinus (sea lamprey): 116947497
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Entry
116947497 CDS
T09614
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3-like
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116947497
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmrn02000
]
116947497
Transporters [BR:
pmrn02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116947497
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116947497
NCBI-ProteinID:
XP_032819201
UniProt:
A0AAJ7X312
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Position
30:4718867..4858724
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AA seq
608 aa
AA seq
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MAAQNSIPLVNGKVESTEMDIPPGAPGKQKINERGQWNNKVEFVLSVAGEIIGLGNVWRF
PYLCYKNGGGAFLIPYVIFFVCCGIPVFFLETALGQYTSQGGVTCWRLVCPLFEGLGYGT
QVIVTYLNVFYVVILAWAIFYFCNCFTADLPWASCNNHWNTNSCVEFHHTENITAVRVAR
EGTSPVIEYWERRVLGISNGIDNIGNLRWELALCLLAAWIVCYFCIWKGTKSTGKVVYVT
ATFPYVMLIILLIRGVTLPGASEGIKFYLYPDVSRLSDPQVWVDAGTQIFFSYAICLGCL
TALGSYNHYNNNCYKDCVMLCCLNSGTSFVAGFAIFSILGFMAYEQNVPIAEVAESGPGL
AFIAYPKAVTMMPLSPLWAALFFLMLIFLGLDSQFVCVESLVTALTDMYPHIFRVGKRRE
LLLLVAAIVFYLMGLIMLTEGGMYVFQLFDYYAASGMCLLIVAFFESVCIGWIYGGDRFY
DNIEDMIGYRPWPWVKWCWMFVTPGICASIFLFSLIKYMPLTYNKVYVYPTWGYALGWFL
ALSSVICIPIVMVYKLVKTPGTIKERFHTLMQPSSSLPQMKRHQLGNRVEESKGPDTVCA
LLEKETNI
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcagaattccatcccgctcgtgaacggcaaggtggagagcacggagatggac
attccgcccggcgctcctggcaagcagaagatcaacgagcgcgggcagtggaacaacaag
gtggagtttgtgctgtccgtggccggagagatcataggactggggaacgtgtggcgcttc
ccgtacctgtgctacaagaacggaggcggtgccttcctcatcccgtacgtgatcttcttt
gtgtgctgtgggatccccgtgttcttcctcgagacggccctgggccagtacaccagccaa
ggaggagtcacctgctggcgcctcgtgtgccccctgtttgaaggcctgggctacggcacg
caggtcatcgtgacctacctgaacgtcttctacgtcgtcatcctggcctgggccatcttc
tacttctgcaactgcttcacggccgacctgccctgggcttcgtgcaacaaccattggaac
acaaacagctgcgtggaatttcatcacacggagaacatcacggcggtccgcgtggccagg
gaagggacatcaccagtcatcgagtactgggagcggagagtgctgggcatctccaatggc
attgacaacatcggaaaccttcgctgggaactggccctctgcctcctggcggcgtggatc
gtctgctacttctgcatctggaagggaaccaagtcgaccggaaaagtcgtttacgtgacg
gccaccttcccgtacgtgatgctgatcatcctcctgatccgtggcgtcaccctacccggg
gccagcgagggaatcaagttctatctctaccccgacgtcagccggctctccgatccgcag
gtgtgggtcgacgctggcacgcagatcttcttctcctacgccatctgcctgggctgcctg
accgcactgggaagctacaaccactacaataacaactgctacaaggactgcgtcatgctc
tgctgcctcaatagcggcaccagcttcgtggcggggttcgcgatattctccatcctgggc
ttcatggcgtacgagcagaacgtgccgatcgccgaagtggccgagtccggacccggcctg
gcgttcatcgcttaccccaaggcggtgaccatgatgccgttgtctccgctgtgggctgcc
ctcttcttcttgatgctcatcttcctgggtctcgacagccagtttgtgtgcgtcgagagc
ctggtgacggcgcttacggacatgtacccgcacatcttccgcgtgggcaagaggagagag
ctcctcctgttggtggccgcgattgtcttctacctcatggggctcatcatgctgacagag
ggagggatgtacgtgttccagctcttcgattactacgctgcgagcggaatgtgcctcctc
atagtcgccttcttcgagtccgtctgtattggctggatttacggaggcgaccgattttac
gacaacatagaggacatgattggttaccgaccgtggccgtgggtgaaatggtgctggatg
ttcgtcacgcctgggatctgcgcaagcatcttcctcttctcgctcatcaagtacatgccg
ctgacctacaacaaggtgtacgtctacccgacgtggggctatgccctcggctggttcctc
gccctctcctccgtcatctgcattcccatcgtcatggtctacaagctggttaagacgccc
ggcaccatcaaggagcggttccacacactcatgcagcccagctcgagcctgccacagatg
aagcgccaccagctgggcaaccgcgtggaggagagcaaaggtcccgacaccgtgtgtgcg
cttctcgaaaaggagacgaacatctag
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