Petromyzon marinus (sea lamprey): 116948692
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Entry
116948692 CDS
T09614
Name
(RefSeq) transformer-2 protein homolog alpha-like isoform X1
KO
K12897
transformer-2 protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116948692
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmrn01009
]
116948692
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116948692
Protein phosphatases and associated proteins [BR:
pmrn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116948692
Spliceosome [BR:
pmrn03041
]
Common components
Common spliceosomal components
SR proteins
116948692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
116948692
NCBI-ProteinID:
XP_032821530
UniProt:
A0AAJ7TP95
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All DBs
Position
34:9512762..9524678
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AA seq
297 aa
AA seq
DB search
MSDAEDGITFETRNSLLKSKSRSPATRRSKSASRSKSRSRSRSKSSRSRSRSRHSSYRRY
SRSRSRSRSRRRHRSRSHSRRRRSFTNSPFSNRRRHQGDRCAYNARQGNPEPNTCLGVFG
LSLYTTEHDLREVFGRYGPVADVNVVYDQQSGRPRGFAFVYMQNMEDSKEAKERVNGMEL
DGRNIRVDFSITKRAHTPTPGIYMGRPSFPPRRREGHERGGYDRGDRYDRGERGGGYHSR
GGYDRGGYDRYEERDYDHRHSHSSYGRYRKRSPSPYYGRGGGYHSRSRSRSYSPRRY
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgccgaggatggcatcacgttcgagaccaggaattcgcttttgaagtccaaa
agcagaagtcctgcaacacgcaggtccaaaagtgcgtctcgctccaagtccagatctcgc
tcccgttccaaatccagcaggtcgcgctccaggtcacggcacagctcgtaccggcgctac
tctcgttcccgctctcgctcccgttcccgccgccgccaccgctcgcgctctcactcgcgc
cgccgccgcagcttcaccaactcgcccttctcaaaccgtcgccggcaccagggagaccgg
tgcgcgtataacgcccgacagggaaacccggagcccaacacgtgcctgggcgtgtttggc
ctgagcctgtacacgacggagcatgatctgcgcgaggtgtttggccgctacggccccgtg
gctgatgtcaacgtggtgtacgaccagcagtcaggccgcccgcgtggcttcgcgtttgtc
tacatgcagaacatggaggactccaaggaggctaaggagcgagtgaatggaatggagctg
gatggacgcaacatccgcgttgacttctccatcacgaaacgcgcgcacaccccgacgccc
ggtatctacatggggcgtcccagcttccccccgaggcgcagagaaggccatgagcgtgga
ggctacgaccgtggggatcgctacgatcgtggggaacgtggcggcgggtaccacagtcgc
ggcgggtacgatcgcggcggatacgatcgctacgaggagcgggactacgaccacaggcac
agccacagcagctatggacggtacaggaagcgctccccatctccgtactacggccggggg
ggaggctatcactcgcgctcacgctctcgctcgtattccccgcgtcgatactga
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