Petromyzon marinus (sea lamprey): 116950640
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Entry
116950640 CDS
T09614
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116950640 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116950640 (TTC37)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
116950640 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_CcmH_CycH
TPR_2
TPR_16
TPR_14
TPR_1
TPR_17
TPR_8
TPR_12
TPR_11
TPR_Slam
TPR_9
DUF5588
ANAPC8
TPR_4
Hydant_A_N
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
116950640
NCBI-ProteinID:
XP_032824450
UniProt:
A0AAJ7TUQ4
LinkDB
All DBs
Position
40:complement(945658..992229)
Genome browser
AA seq
1602 aa
AA seq
DB search
MASKEVKVALKAAREAINGKDFKEVLKHCKAVLQADKENYTAWVFIGVAAGELDQPEKAE
DSFRRAAHIDPAQPLAWQGLASLCEKTEQPRFKQALPDVYEKLLGIFESSDHAKWCDICK
KLAETQEAQQRVVEAVRAWVRLYEWKRRQDGVDGTELRTLWGRVTSALARADAAGPAADG
GLECAYERLLEMGSEDVAGPEEEKLLVNYITFLSKRAGAEERLRTTCAAALARDGAGRAL
LERVATVYVGAGDASEAAVRCYERLRAVEPRSAAARVGLALGELREGRLGDARETLREVS
AEEPGFLPAWRHLSDVLLRTHDHHGAAAATEHALQLLTKQEAGSVASGAQRRALLRIRAE
ALTASRPEEAAAIYAELLVEAAVDVDLRVGLADALLKGKQLPEARQIVEELRASNADSVA
VLALHGRLALEEGDLALAESRSGAALAMEPENGRLQLQLGLVLWEGGGEGRTDKTKACAH
FLKAARCDPFLGDAFLHLGLFYRDVAGDLGRARGCFRRTLELSPAEPRAGAGAVDCSVTL
GDEDAALQILTAVTEQAVAGTAQWAWLRLGLYHLRRRDHPRAITCLQSALRAEPRDAVSW
ECLGEAYLARGAYTAAGKAFARSAELAPGPQSTYSRYQTAAIRQSLGSHAEAARLYQQLL
CDDPTHVPALKGLAESHVALARALLADHLDGRAVSHTQEALAALASAVVLRPDFSCLWKL
VGDACTALHRLHPSSVSLGVPAILLGPGDGGLPAGTTATVGKRAALELGARCYGRALRLL
PGCSGPWHDLGVNYYRQAQHLRQEAARSPSTELAQETAGAAMEVLDKALQSLKKAVMLDS
SNHRHWSALGVVAASEGVKNEALAQHAFIKSIQAEQNNVVAWTHLGALYLGKGSMELAHE
AFKVAQSLEPSYVASWIGQALIAETIGSDEAMDLFRHTTELGVHVEGALGYVHWVCTTLR
QQRPGHGGGTATAAAPVLYSVERMGAVPSAHQAACKYIERYPDDAVALTMLGLLSEHLDL
HRQAVDAYHRALEVIRSSGEQEKLNWALRNYGRALHAAGRYGEAAATFRAASPVPAHFDD
TAGLALALFKLGKLEESYAAYERALAAAASDADRSLVLTALAAVEFRRGRHDAAKTLLFR
CSLSKEPCEEGLLALCALGLALGDPTLSAAALSELAKPRVSAGRGGVARGARAGRGAARA
SRVSLLTVALLALRGDGVAVQRQASKAVHRNPGDASLWEFLARVVPQFTPNKAKGGATAA
QVATILDFSIAKRAPRYHAVNLLAGGSGLRGLKASQRAVHLYPDDAAGWACVLAASHADA
VRRWADATAPRPRPGLSDAVLDIVATRVNSGEVEAGLHDLGGWVHCQAASAELWEGRNKA
ALRACFKGLDSLGDDDGARLTLSFVAALVRFCEALTSGGRSWGGALEDLRSATLDTATPY
AWQALAGVYLRAGRALAAEVCYRHGLQVAARVGDFSGKVSSLLRLAHLAVVIVAAGVKEE
RWAPLAQEALATLAKAAPGEAVTRLLQGALPFCMNPGARQTRKALERAARGAGIEASIAR
CLLVRHLLLKSDDHLLQILLEDVKTCGDTRTLALHARLSAGS
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaaggaggtgaaggtggccctgaaggcggcgcgtgaggccatcaatggcaag
gacttcaaggaggtgctcaagcactgcaaggcggtgttgcaggccgacaaggaaaattac
acggcgtgggtgttcatcggcgtggcggccggggagctggaccagcccgagaaggctgag
gactcgttccgcagggccgcgcacatcgacccagcgcagccactcgcatggcagggactg
gcgagtctgtgtgagaagacggagcagccgcgcttcaagcaggccctcccggacgtctac
gagaagctgctgggcatcttcgagagcagcgaccacgcgaaatggtgcgacatctgcaag
aagctggcagagacgcaggaggctcagcagcgagtggtcgaggccgtgcgagcttgggtg
cgtctctacgagtggaagcgccggcaggacggggtcgacgggacggagctgcgcacgctg
tggggccgcgtgacgtccgcgttggcacgcgccgacgccgccggcccggccgccgacggc
gggctggagtgtgcatatgagcggctgttggagatgggttcggaggacgttgctgggccg
gaagaggagaagctcctggtgaactacatcactttcctgtccaagcgtgccggcgccgag
gagcgtctgcgcaccacctgcgccgcggccctcgcgagggacggcgccggccgggccctg
ctggagcgcgtcgccaccgtctacgtcggcgccggcgacgcgagcgaagcggccgtgcgc
tgctacgagcgcctgcgagccgtggagccgcggagcgctgccgcgcgggtcgggttggcg
ctcggggagctgcgcgagggccgactcggggacgcccgggagacgctgcgtgaagtgagc
gccgaggagccgggcttcctgccggcgtggcgccacctgtcggacgtgctcctgcgcacc
cacgaccaccacggcgccgccgccgccacggagcacgcgctgcagctgctgacgaagcag
gaggcgggttccgtcgcgagcggagcgcagcggagggcactgctccggatccgagcggag
gcgctgactgcgagccgcccggaggaggcggcggccatctacgcggagcttctggtcgag
gctgctgtggacgtggatctcagggtggggctggcggacgctctcctgaagggcaagcag
ctcccggaggcgcggcagattgtcgaggagctgcgggcgtcgaacgcggactccgtcgcc
gtactggcgctgcacggccgcctcgccctggaggagggcgacctggcgctcgccgagagc
cgctcgggggcggcgctcgcgatggagccggagaacgggcggctgcagctgcagctcggg
ctggtgctgtgggagggcggcggggagggccgcacagacaagaccaaggcctgtgcccac
ttcctcaaggcggcgcggtgcgacccgttcctgggcgacgcgttcctgcacctgggcctc
ttctaccgtgacgttgcgggggacctgggccgcgcccgcggctgcttccgccgcacgctc
gagctgagccccgcggagccgcgcgccggggccggcgccgtggactgcagcgtcacgctg
ggtgacgaggacgcggctctgcagatcctcacggccgtcacggagcaagcggtggccggc
acggcacagtgggcctggctgcggctcggactctaccacctgaggcggcgcgaccacccc
cgcgccatcacctgcctgcagtcggcgctgcgggcggagccgcgcgacgccgtcagctgg
gagtgtctgggcgaggcctacctggcacgcggtgcctacaccgccgccggcaaggccttc
gcacgctccgccgagctggcgccgggcccgcagtccacctacagccgctaccagacggcc
gccatcagacagtccctgggctcgcacgccgaggccgcccggctctaccagcagctgctg
tgcgacgaccccacgcacgtaccggccctgaagggtctggccgagagccacgtggccttg
gcacgcgccttgctcgccgatcacctggacggccgcgcggtatcgcacactcaggaggcc
ctcgccgccctcgccagcgccgtggtgctgcgccccgacttctcgtgcctgtggaagctc
gtgggagacgcgtgcacggcgctgcaccgcctgcacccctccagcgtctccctgggagtc
cccgcgatcctcctgggccccggcgacgggggcctcccggccggcaccaccgccaccgtc
ggcaagcgggcggcgctggagctgggagccaggtgctatggccgcgccctgcgcctgctg
cccggctgctcgggcccttggcacgacctgggcgtcaactactaccgccaggcccagcac
ctccgccaggaggcggcgcggagccccagcacggagctcgctcaggagaccgccggtgcg
gccatggaggtgctcgacaaggccttgcagagcctgaagaaggcggtgatgctggacagc
tccaatcaccggcactggagcgcgctgggcgtggtggcggccagcgaaggtgtgaagaac
gaggccctggcccagcacgccttcatcaagtccatccaggccgagcagaacaacgtggtg
gcgtggactcacctgggtgccctgtacctgggcaaaggcagcatggagctggcccacgag
gcgttcaaggtggcgcagtctctggagccgtcctacgtcgcgtcctggattggtcaggcc
ctcatcgccgagacgatcggcagcgacgaggccatggacctcttcaggcacacgacggag
ctgggcgtgcacgtggagggagcgctgggctacgtgcactgggtgtgcaccacgctgcgc
cagcagcggcccggccacggcggcggcaccgccaccgccgccgcccccgtgctgtacagc
gtggagcgcatgggagcggtgcccagcgcgcaccaggctgcctgcaagtacatcgagagg
tacccagacgacgccgtggcgctcaccatgctgggactactcagcgagcacctggacctg
cacaggcaggcagtggacgcctaccaccgggctctggaggtcattaggtcatcgggtgag
caggagaagctgaactgggctctgagaaactacggccgcgccctgcatgccgcgggacgc
tacggcgaggcggccgccacgttcagggcggcgtccccggtgccggcgcacttcgacgac
accgcggggctcgcactggcgctcttcaagctgggcaagctggaggagagctacgccgcg
tacgagcgagccctggccgccgcggcctctgacgccgaccgctcgctggtgctcacggca
ctcgcggccgtggagttccggcgcggccgccacgacgccgccaagacgctgctcttccgc
tgctccctgtccaaggagccgtgcgaggagggcctgctggcgctctgcgccctgggcctg
gcgctgggcgaccccacgctgtcggcggccgccctctcggagctcgccaagccgcgggtg
tcggcgggtcgcggcggggtcgcgcggggggcacgcgcggggcggggggcggcgcgcgcc
tcccgcgtgtcgctgctcacggtcgccctgctggcgctgcggggcgacggcgtcgccgtg
cagcgccaggcctccaaggccgtgcacaggaacccgggcgacgcgtcgctctgggagttc
ctggctcgggtggtgccacagttcacgccaaacaaagccaagggaggagccacggccgcc
caggtggcaaccatattggacttctccatcgccaagcgggcgccgcgctaccacgccgtc
aatctactggcggggggctccggcttgcggggtctcaaggcctcgcagcgggccgtgcac
ctctacccagacgacgcggcgggctgggcctgcgtcctcgcggccagccacgccgacgcg
gtgcggcgctgggcggacgcgacggcgccacggccgcgcccgggcctcagcgacgccgtg
ctggacatcgtcgccacgcgagtgaacagcggtgaagtggaggccgggctgcatgacctc
ggcggctgggttcactgccaggcggcctcagccgaactctgggagggccgaaacaaggcc
gcactcagagcctgcttcaagggcctcgactctctgggcgacgacgacggggcgcgactg
acactgagcttcgtggctgccctcgtccgcttctgcgaggcgctcacctcgggtggccgg
agttggggcggcgcgctggaggacctccgctccgccacgctggacaccgccaccccctac
gcctggcaggcgctggccggcgtgtacctgcgcgccgggagggcgctcgccgccgaggtt
tgctaccggcacgggctgcaggtggcggcgcgcgtcggcgacttctcggggaaggtctcc
tccctgctgcgcctcgctcacctcgccgtcgtcatcgtcgccgccggggtgaaggaggag
cgctgggcgccgctggcgcaggaggcgctggcgacgttggcgaaggcggcaccgggggag
gcggtgacgcggctcctgcagggggcgctgcccttctgcatgaaccccggggcaaggcaa
acgcgcaaggccctggagcgagcggcgcgtggcgccggcatcgaggcctccatcgcgcgc
tgcctcctcgtgcgccacctgctgctcaagagcgacgaccacctcttgcagatcttgctg
gaagacgtgaagacgtgcggggacacgaggacgctggcgctgcacgcgcgtctctccgcc
ggaagctag
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