Petromyzon marinus (sea lamprey): 116952039
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Entry
116952039 CDS
T09614
Name
(RefSeq) protein Jumonji-like
KO
K11478
protein Jumonji
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116952039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116952039
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
116952039
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
116952039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
zf-C5HC2
JmjN
Motif
Other DBs
NCBI-GeneID:
116952039
NCBI-ProteinID:
XP_032826931
UniProt:
A0AAJ7TZ73
LinkDB
All DBs
Position
45:3106970..3145090
Genome browser
AA seq
1653 aa
AA seq
DB search
MNHQRAERPKRNRIQKQRDYNNGIPWWEERYVQRALHLSLKDHRASKKPSASPAVADIGG
GCADDDGIGGALDVKLSRAAVLQRQDVFSHADSEETVDRARPVGALAAVTWPRMQAQRKF
AQIYPPGCPGSPTSPAGSVGLAGRCVDAFERSSPLPFGFGQQQQQPPFLLGPCPRSYPGS
VRAPYPGAVQGRMRDLCKKTPKTEDFLTYLCLRGSSALPSSLRYYGMTPESSRPRRETQG
NVATRPSKGPSPEKTVPVAVPPTQPPPPPPPPPPPPTPPPTPSPKKPPRSPPSRNAIPLL
ADIKKELIWPEECILGEKRRSARKKGIAEPCGGGGGGGGGGGGGGGNDSGPSAEPPRPER
ARRVAASGSGAWTGGGERQRGPDWRGDVAWNGCGSEEGDGDAGRGDGSHVEEEEEAPAVA
SRDAGYRPAAKMSASKSAVPAQYPQTSQGPAQRESRGSRRSARHATRHAAALNAGSPDRA
PDADAADDGGVSRGRSRAARRRPRSLEPDSDPGPPREMMRRRRALPVEPPRTREELRNGP
ARLHRCRGGGGGGGGSDTDAEEANGTRMTRRQRAAEVRGRASGDSEKAGTVLNQQQQQQQ
QKKRPQQSALPDKKRKLEEMANCVFQVEGKRQPAPPRQKTGVVSPPRASPREALQSAITV
GLAGEFNPSPGGNEEDRENSVEPSVTSDAPTDDPAAGRENDPKTRRRRRSASVERAVSTA
SDSDGESSRACASPPAPAPSQPSADSAKHDDDDEQRGTRGPPPVAPGANVLPACARPAQR
PRRACSAPDAEPGRQQPQQQQQPPPTLRSHGKRLRSNSNLASGDEAKTDERPAAPRGAAP
APTPVSPTLASASVSASAAPSFLAQALPEVPVLYPTAREFLDPLAYVEGVRSRAGVEEAG
ACRVAPPTCWRPECRLSDDMRFVTRVQHVHKLGRRWGPNEMRLACIRKHLLRQGIALEEL
PLIGGCELDLASLSVLMESLGGMQQLRDARAWQRLADALRVPRAAQDRLARLQEAYCRYL
LAFEGLPDGERRGLEREVLAERERIEARGGALEGQQGQGDIPEGLGLGASFKPWNRLTSR
VRNGVSSNGMSPLPSDGEDGEAVTNPPKETHRDSGVLKDVHKWCFKGKSVSLTAFYRAAR
NLLSTHCSKEPSASLIEQKYWEIVQNQDMHVSVHCGKVDTNFVSSGFPIGRSEPFSRHSW
NLTMLPSNPGSVLRHLGALSGVTVPWLNVGMVFSTWVWARDPHYLPSIDYLHTGADKIWY
CIPASQKDKLDKVVHSLLQANGKSGLEMLQNSMVSPEVLSHAGVSVYRTVQRSGQFVVTF
PGSFTSSVSCGYSVSETITFAPADWLPLGCRAAEEVKRRCIPNMFPVDKLLYLTAVGELE
KGNAAALAHVGPLLGQLRDRELNLRRRLHVRGLRSWARYGCQDAHHPGVAEVRKRPRKWL
PIESAERRCLTCRQLCYLSMVVEESENVVFCLHCALARTEEQGSCRRLKLMYRYDQEQMD
SLVDRVNAAIALSLGAGLASPGTHRSPVPSVSSTTTTTTTPPPPRRTANSTRRHPASEPA
SPTNTAAATTADTADTAGSAYDGADGRLSSPSRRRRRAEPRGGSAATAAAAAAAAAEDGA
YGRQGQRQVRRAALGPYGARQRGEASGPARPRP
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatcagagggccgagagaccgaagcgtaacagaatacagaagcaacgggactac
aacaatggcatcccatggtgggaggagcgctatgtacagagggccctgcacctctctctg
aaggaccacagggcctccaagaagccatcggcgagcccggcggtcgctgacattggtgga
ggctgtgccgatgacgatggcattggtggtgctttggacgtaaagttgtcaagagcggcg
gtgctgcagcggcaggatgtgttttcccatgcggactcggaggagaccgtggacagagcg
aggcccgtcggtgccctggctgccgtcacctggccacgcatgcaggcccaacgcaagttc
gctcagatctacccgccgggctgcccgggctcgccgacgtctcccgccggctccgtgggg
ctggcaggccgctgcgtcgacgcgttcgagagatcctctccgttgccgttcggcttcggg
cagcagcagcagcagccaccgttcctcctgggtccgtgtccccgttcgtacccggggtcc
gttcgcgccccctaccctggcgcggtgcaggggcggatgcgagacctgtgcaagaaaacg
cccaagacggaggactttctcacgtacctctgcctccgaggttcctccgcgctgccgagt
tccctgcgctactacggcatgaccccggagagcagccgtccgcgacgggagacgcaaggc
aacgtggcgacacggcccagcaagggtccttcgcccgagaaaaccgttcccgtcgccgtg
ccgccaacacagcctccaccgccgccgccgccgccaccaccaccaccaactccgccacca
acgcctagcccaaagaaaccgccaaggagcccacccagcagaaatgcgatcccattgctc
gcggacatcaaaaaggagctaatctggcctgaggaatgcattctcggcgagaagcggaga
agcgcacgcaagaagggcatcgccgagccatgcggcggcggcggcggcggcggcggcggc
ggcggcggcggtggcggcaacgactcggggccatcagccgagccccctaggcccgaacgg
gctcggagagtcgcggccagcgggagtggcgcgtggaccggcggcggggagcgccagcgc
ggcccggactggcgcggggacgtcgcgtggaacggctgcgggtccgaggagggcgacggc
gatgcggggaggggcgacggcagccacgtggaggaggaggaggaggctcctgctgtggcc
agcagggacgccggctacagaccggccgccaagatgtccgcctccaagtcggcggtgcca
gcgcagtacccgcagacgagccagggccccgcgcagagggagtctcgcggctctcgtcgc
tcggcccgccacgccacccgccacgccgccgccctcaacgccggcagcccggaccgcgcg
cccgacgccgacgccgccgacgatggcggcgtctcccggggtcgctccagggcggcgcgg
cgccggccgcgctctctcgagccggactctgatccggggcccccgcgcgaaatgatgcgg
aggaggcgagcgcttcccgttgagcctccgaggacgagggaggagctccgcaacggtcca
gctcggctgcaccgctgtcgcggcggcggcggcggcggcggcggtagcgacacggatgcc
gaagaagcaaacggaacccgcatgacgcgcaggcagagagcggcggaggttagagggagg
gcatccggagattcggaaaaggccgggactgttttgaaccaacagcagcagcagcagcag
caaaagaagcgtccgcagcagtcggcgctgcccgacaagaagaggaagctggaggaaatg
gcgaactgcgtcttccaggtggaagggaagagacagccggcgccgccaaggcagaagact
ggcgtcgtttctcccccacgggcatcgccccgcgaagctctgcagtcggcaatcaccgtc
gggctcgccggagaatttaatcccagcccgggcggcaacgaagaagaccgagaaaatagt
gtggagccctcggtgacgagcgatgctccgacagacgaccctgccgctggccgggagaac
gaccccaagacccgacggaggcgcaggagcgcaagcgtcgagcgagccgtctccaccgcg
agcgatagcgacggtgaaagctcgcgggcctgcgcctcgccacccgctccggccccatcc
cagccctcggccgactctgcgaagcacgacgacgacgacgagcagcgggggacgaggggt
cctcctccggtcgctcccggtgccaatgttctcccggcatgtgcgagaccggcgcagagg
ccccggcgcgcctgcagtgctcctgacgctgagcccggccgccagcagccgcagcagcag
cagcagccaccgccgacgcttcgctcgcacggcaagcgtctccgcagcaacagcaatctt
gccagtggggacgaggccaagaccgatgagcgaccggcggcccctcggggggccgcgccc
gctcccacgcccgtgtcgcccacgctggcgtcggcgtcggtgtcggcatcggccgcgccc
tcgttcctggcgcaggctctgccggaggtgccggtgctgtacccgacggcgcgggagttc
ctggacccattggcgtacgtggagggcgtacggtcgcgggcgggggtggaggaggcgggc
gcgtgccgcgtagcgccgcccacttgctggaggcccgagtgccggctcagcgacgacatg
cgcttcgtgacgcgcgtgcagcacgtgcacaagctgggccggcgctggggccccaacgag
atgcggctggcgtgcatccgcaagcacctgttgcgccagggcatcgcgctggaggagtta
ccgctcatcggcggctgcgagctggacctggcctcgctgtcggtgctgatggagtctctg
ggcgggatgcagcagttgcgcgacgctcgcgcgtggcagcgcttggcggacgcgctgcga
gttccgcgcgccgcccaggaccgcctggcacggctgcaggaggcgtactgccgctaccta
ctcgccttcgagggcctgccagacggtgagcgacgcggtctggagcgggaggtgctggcg
gagcgcgagcggatcgaggcgcgcgggggggctctggagggacagcagggccaaggggac
atccctgaggggctcgggctcggagccagcttcaaaccgtggaacagactaacgagccgc
gtgcggaacggagtgtcctccaatgggatgtctccactgccgagcgacggggaggacggg
gaggctgtgacgaacccccccaaagagacgcacagggacagcggagtgctcaaggacgtg
cacaagtggtgcttcaagggcaagtcggtatcgctgacggcgttttaccgagcggcgcgg
aacctgctgagcactcactgcagcaaggagccgtcggcgtcgctcatcgagcaaaagtac
tgggagatcgttcagaaccaggacatgcacgtgtccgtgcactgcggcaaagtcgacaca
aacttcgtgtccagcggcttcccaatcggccgctccgagcccttctccaggcacagctgg
aacctgacaatgctgcccagcaaccccggctccgtgctgcgacacctgggagctctgtcc
ggggtcacggtgccgtggctgaacgtggggatggtgttttctacgtgggtgtgggcccgc
gacccgcactacctgccctccatcgactacctgcacacgggcgccgacaaaatctggtac
tgcatcccagccagccagaaggataaactggacaaggtggtccactccctactgcaggcg
aatggcaagtctggcttggagatgctgcagaacagcatggtgtccccggaggtgctgagc
cacgccggcgtgtccgtgtaccgcaccgtgcagcgcagcgggcagttcgtggtcaccttc
ccggggtccttcacctcgtccgtgtcgtgcggctactcggtgtccgagacaatcacgttc
gcccccgctgactggctgcccctcggctgccgggccgctgaggaggtgaagaggcggtgc
atccccaacatgttccccgtggacaagctgctttacctgacggccgtgggcgagctggag
aagggcaacgcggcggcactggcccacgtggggcccctgctgggccagctacgagaccgg
gagttgaacctgcggcggaggctgcacgtgcggggactccgctcgtgggcgcgctacggc
tgccaggacgcgcaccatcccggcgtggccgaggtgcgcaagcggccgcgcaagtggctt
cccatcgagtcggcggagcggcgctgcctcacctgccgccagctctgctacctctccatg
gtggtggaggagagcgagaacgtggtcttttgtctgcactgcgcgctggcacgcacggag
gagcagggctcctgccggcgtctcaagctcatgtaccgctacgaccaggagcaaatggac
tcgcttgtcgaccgggtgaacgccgcgatcgctctcagcctcggcgccggcctcgcctcg
ccagggactcaccgcagcccagtcccctcggtgtcctccaccaccaccaccaccaccact
cctcctccccctcgccgcaccgccaactctacccgccgccacccagcctctgagccggcc
agtcccaccaataccgccgccgccaccaccgccgataccgccgataccgccggctcggca
tacgatggagccgacggtcggctttcctctccgtcgcggcgcaggcgaagggccgagccg
cgtggggggtcggcggcgacggcggcggcggcggcggcggcggccgcggaggacggggcc
tacggccggcagggacagcggcaggtgcggcgagcggcgctggggccgtacggcgcgcgc
caacggggggaggcgtccggcccggcgaggccgcgtccgtaa
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