Petromyzon marinus (sea lamprey): 116954607
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Entry
116954607 CDS
T09614
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116954607 (SMC4)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
116954607 (SMC4)
Condensin II
116954607 (SMC4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
Prominin
ATG17_like
CdiI_ImmP
Motif
Other DBs
NCBI-GeneID:
116954607
NCBI-ProteinID:
XP_032831155
UniProt:
A0AAJ7XEA0
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Position
55:complement(1683162..1720411)
Genome browser
AA seq
1286 aa
AA seq
DB search
MSPMAKASTAKRRGNKDDDADDFASEPLASEQAPISAESPEDRRTLQEILESIPSAPPAA
MTNEPGAARLMITHIVNENFKSYAGKQVLGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGY
RAQKIRSKKLSVLIHNSEAHPDLYSCTVEVHFQKIVDKEGDDFDVIPSSEFYVSRSATKD
SVSSYTVSGHKATFRDVGQLLRSHGIDLDHNRFLILQGEVEQIALMKPKAQTEHDEGMLE
YMEDIIGSGRFKPAIEACCRRVEQLNELRGEKLNRVKVVEKEKDGLEAEKNNAVAFLMAE
NDITNLKNSLVQHKMQTARKALATEERKKADIEEASKDLKEKMAELVQAKKGKAKELQAI
DKKLNKINAFIEEHKKTFVQYDLQDVKMRENLKNCASKEKKLAKQLVKDTDKLKEIRNVP
AASDRTIKVATECKAKLEASKSVEEEKLKSVMANFEKETKGLQEEKEVKQQELLALSKEV
NERCSRMEVAQSELDLYMSRHTSALAALNEAKQALTSTTEGLCGRRENIRKLETTIPSTE
KELAQAQLELEKLAPLENAARAEVRALRQKTEEAKSSLCASRSRNKVLQLLMDQKNKGSL
PGIYGRLGDLGAIEEKYDVAISSCCGALDNIVVDTMDTAQACVTYLKKHNIGSATFIGLD
KMRVWEGTMKKSVQGPEGVLRLFDLVRVGDEAVRTAFYFTLRDTLVANNLEQASRVAFQH
QRRWRVVTLQGQVIETSGTMSGGGTRVMKGRMGSSVVSEVPQEEVERMEHKLQEESAKME
QYQQQRSQLEERVQTLQTSLRDMKYNLQKLSAGVKVQVEQEVSLKLQVKELEANVVAAAP
DKNQLKKLEKTLEGFKKEYEKVSSRTGKIEAEVKRIHGLIMEITQGRLKAQQDKVDKINQ
QIDECVSDITKAQVALKTADRNLKKAEEALAKTEREQEENRQAIVRLNEELKSLEEAAAE
IMKECTHAQERGKEVSELQRELMGELKALSEEEQGYQKEELAVRLKVEQFDTKISELNSM
LKHFNKELSKFKLHVLDEEGEAPVLPTLGNRELEELEDPVALANKIAILEEKTLQMKPNL
GAISDYKKKEEIYLQRVSELDAITAQRDEFRHSYEDLRKSRLQEFMAGFNVITNKLKENY
QMLTQGGDAELELVDSLDPFSEGIVFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHY
KPTPLYFMDEIDAALDFKNVSIVALYVYEQTKNAQFIIISLRNNMFEMSDRLIGIYKTNN
TTKSVAINPKTIVLPPLPGEATMPSS
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaatggcaaaagcctcaacggccaagaggaggggaaacaaagacgacgatgca
gatgactttgcatcagagcctttggcatcggagcaagcgccaatttctgcagagtctccc
gaggaccggcgtaccctgcaggagatcctggagagcattccttccgctcctccagctgcc
atgaccaacgagcccggggctgcacgcctcatgatcacacacatcgtcaacgagaacttc
aagtcctatgctggaaaacaggtcctgggccctttccacaagcgcttctcttgcatcatt
ggaccaaacgggagcggcaagtccaacgtgatcgactcgatgctcttcgtgttcggctac
cgtgcccagaagatccgctccaagaagctctccgttctcatccacaattctgaagcgcat
cctgacctttacagctgcactgtggaggtccacttccaaaaaatcgtagacaaggagggg
gacgatttcgatgtgatcccgagcagcgagttttatgtttcccgctcggcgacgaaggac
agcgtgtcatcgtacactgtgagcgggcacaaggccaccttccgcgatgtggggcaattg
ctgcgcagtcacggcatagacctggaccacaaccgcttcctcatcctgcagggtgaggtg
gagcagatcgcgctgatgaaacccaaggcgcagacagagcacgacgagggcatgctggag
tacatggaggacatcatcggctcaggtcgcttcaagccagccatcgaggcctgctgccgc
cgcgtcgagcaactcaacgaactgcgtggagaaaagctgaaccgagttaaggtggtggag
aaggagaaagacggactggaggcggagaagaacaacgctgtggctttcctgatggccgag
aacgatatcaccaatctcaagaacagcctcgttcaacacaaaatgcaaaccgctcgcaag
gcccttgcgacggaagagcggaagaaggcggacatcgaggaggcgtcaaaggatctgaag
gagaaaatggctgagctcgtgcaagccaagaagggcaaggccaaggagctgcaggccatc
gacaagaaactgaacaagatcaacgcttttattgaagagcacaagaaaacgtttgtacag
tacgacctgcaagatgttaagatgagggagaacttgaaaaattgtgccagcaaggagaag
aagctcgccaagcagctggtgaaggatacagacaagctgaaggaaatccgcaacgttccg
gcagcgagcgatcgcacaatcaaagttgcaacggagtgcaaggcaaagctggaggccagc
aagagtgtggaggaggagaagctgaaatccgtgatggctaacttcgagaaggagaccaaa
ggactgcaggaggagaaggaggtgaagcagcaggagctcctcgcactgagcaaggaggtg
aacgagaggtgctcccgcatggaagtagctcagtcggaactggacctgtacatgagtcgc
cacacctcggccctggctgccctcaacgaggccaagcaggccctcaccagcaccaccgag
ggcctttgcgggcggagagaaaacatacggaagctggagacaaccattccctcgacagag
aaggagctcgcacaggcccagctggagctggagaagctggcacctctggagaacgcagcg
cgcgcagaggtgcgagcattgcgtcagaagacagaagaggcgaagagctccctgtgtgcc
tcacgctcgcgcaacaaagtgctgcagttgctcatggaccagaagaacaagggctccctt
cccggcatctatggtcgcctgggggacctgggagccatcgaggagaagtatgacgtggcc
atttcgtcatgctgcggtgcacttgacaacatcgtggtggacaccatggacacggcgcag
gcgtgcgtcacctacctgaaaaagcacaacatcggttccgccaccttcattggtctcgac
aagatgcgcgtgtgggagggcacgatgaagaagagcgtgcagggccccgagggagtgctg
cgcctcttcgacctggtgcgcgtgggcgacgaggcggtgcgcacagcgttctacttcacc
ctgcgcgacacgctggtcgctaacaacttggagcaagcgtcgcgcgtcgccttccagcat
cagcgccgctggagggtggtcaccctgcagggccaggtcatcgagacgtctgggacgatg
tctggtggtggcaccagggtgatgaagggcaggatgggctcctctgttgttagtgaagta
ccacaagaggaggtggagcgcatggagcacaagctgcaggaggagagtgccaaaatggag
cagtaccagcagcagaggagccagctggaggagcgggtgcaaacgctgcaaaccagcctg
cgggacatgaagtacaacctgcaaaagctctcggccggcgtgaaggtccaggtagaacag
gaggtgagcctcaagctgcaggtgaaggaactggaggccaacgttgtggcggctgcacca
gacaagaaccagctcaagaagctcgaaaagactctggagggcttcaagaaagagtatgag
aaagtgtctagtcggacgggtaagatcgaggccgaggtgaaacgcatccatgggttgatc
atggagatcacgcagggccggctcaaggcacagcaggacaaggtggacaagatcaaccag
cagatcgacgagtgtgtgtcggatatcaccaaggcccaggtggccctcaaaacagctgac
agaaacttgaagaaggcggaggaggctctggctaagacggagcgggagcaggaggagaac
cgccaggccattgtgcggctcaatgaggaactgaagagcttggaggaggcggctgcagag
atcatgaaagaatgcacgcatgcacaggagcgaggcaaggaggtgtcggagctgcagagg
gagctgatgggcgagctgaaggcgctgagcgaggaggagcagggttaccagaaggaggag
ctcgcagtgcgcctcaaagtggagcagttcgacaccaagatctcggagctcaacagcatg
ctgaagcacttcaacaaagagctgtcgaagtttaagctgcacgtcctggacgaggagggc
gaggcgccggtgctgcccacgctcggcaacagggaactggaggagcttgaggaccccgtg
gccctggccaacaagatcgccatcctggaggagaagacgctgcagatgaagcccaacctg
ggagccatctctgactacaagaagaaggaggagatctacctccagcgagtctccgagctg
gatgcaatcacggctcagcgggacgagttccggcactcgtacgaggatctgcgcaagagc
cgcctgcaggagttcatggctggattcaatgtgatcaccaacaagctgaaggagaactac
cagatgctcacacagggcggagacgcggagctggagctggtcgacagcctcgaccccttc
tctgaggggatcgttttcagcgtgcgtcccccgaagaagagctggaagaaaatattcaac
ttgtcgggcggtgagaagaccctaagctcgctggcgctggtgtttgcgctgcaccactac
aagcccacgccgctctacttcatggatgagattgacgcggcgctcgacttcaaaaacgtc
tccatcgtggcgctctatgtctacgagcaaaccaagaacgctcagttcatcatcatctct
ctgcgcaacaacatgttcgagatgtcggatcggctgatcggcatctacaaaacgaacaac
accaccaagtccgtggccatcaaccccaagaccatcgtgttgcccccactgcccggtgaa
gcaacaatgccgagctcgtga
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