Petromyzon marinus (sea lamprey): 116954700
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Entry
116954700 CDS
T09614
Name
(RefSeq) integrin alpha-9-like isoform X1
KO
K06585
integrin alpha 9
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04510
Focal adhesion
pmrn04512
ECM-receptor interaction
pmrn04514
Cell adhesion molecule (CAM) interaction
pmrn04518
Integrin signaling
pmrn04810
Regulation of actin cytoskeleton
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116954700
04514 Cell adhesion molecule (CAM) interaction
116954700
04518 Integrin signaling
116954700
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116954700
09142 Cell motility
04820 Cytoskeleton in muscle cells
116954700
04810 Regulation of actin cytoskeleton
116954700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmrn04515
]
116954700
Cell adhesion molecules [BR:
pmrn04515
]
Integrins
Integrin alpha subunits
116954700
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
Integrin_alpha
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
116954700
NCBI-ProteinID:
XP_032831291
UniProt:
A0AAJ7XEB4
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Position
56:7731462..7765336
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AA seq
789 aa
AA seq
DB search
MMMLLLLMMMMLLPLQLGSYFGAALCVGDVNGDSLSDLLVGAPFHSDLRDEGRVFVFLSR
GGGAMLEMPTPLQGDNAYNARFGEAMVNLGDLDHDHYPEFAIGAPNEDDNGGAVYVYHGS
AHGIAAKYSQRISGRGIHPSLRMFGQSLAGGLDLDDNGFADLAVGAYGSNAAVLIRARPV
VDVSASVVLPRGINVTGPGCGRGGRGAHCFTASVCLSYSGPGLTRSLDMRYELIADSVKQ
HSGLPVRLSLESAEGASSVPGSVRLTIHEQRCLQHVAYVKGKVNDVVAPLVFEVRYSLAH
GETAEGERRGASRRRRSDSPGGGNNTGSSGSSGGGGGGGGGGDDDDDDLPALRPVIRWRE
RHRDSARSVTKFERNCHTDVCPADLRVNGTLVLPRLLSDRPYLVVGEVHSLRVNLSLGNV
GEDAFDPTLRMHFHRDLFLVNAWDTEEEKALSCEVLEGNLLQCSVGFPFLKSHTKREVSV
LFDSSQLSGEDDLLEFSAQITSQNIEHNETLDDNQELLSIPLRYEVDTTLHGSVSQTSIL
YGGDLSDREAVALPGQPCHFQWLNFTFQALNLGPSQAPGAFLEVLIPSRLHPEGPHALQL
HEVQVSPGGGSCLGPALGAVCVTPEQHSESVYQLFSFFSKSGRKLLDCASWPEGCVAVRC
ELGPFAPGETPSVSVKALLNTDILQQESSSVIQFSARAELRVPHSDRVVELSTGAPGTIA
VVFEALHDLRPRGFIAVWIIAISLIIGLLILILLIVLLWKLGFFKRNLKEELEMQRARKK
SWDWVKMAE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgttactgctgctgatgatgatgatgctactgccgctgcagctgggctcatac
tttggcgcggcgctctgcgtgggcgacgtgaacggcgactccctctcggacctccttgtg
ggcgcacccttccacagcgacctccgtgacgagggccgcgtcttcgtcttcctgagccgc
ggggggggtgcgatgctggagatgcccacgccgctgcagggagacaacgcctacaacgct
cgcttcggggaggcgatggtaaacctgggggacctggaccacgaccactaccccgagttt
gcgatcggagcgcctaacgaggacgacaacggcggggcggtgtacgtgtaccacggcagc
gcgcacggcatcgccgccaagtactcgcagaggatcagcggtcgaggcatccacccctcc
ctgcggatgttcggccagtccctggcgggtggactcgacctggatgacaacggcttcgca
gacctcgcggtcggagcctacggttcaaatgcagccgtgctgatcagggctcgtcccgtg
gtggacgtctcggcgtccgtggtgctgccgcgagggatcaacgtgacgggccctgggtgc
ggccgtgggggccgtggggcccactgcttcacggcctccgtctgcctctcctactcgggg
cccgggctcacgcgcagcctcgacatgcggtacgagctgatcgccgactcggtgaagcag
cactctggcctccccgtgcggctctcgctggagagcgccgagggagcgagctccgtgcca
ggctcggtgcgcctcaccatccatgagcagcgctgcctacagcacgtggcctacgtgaag
gggaaggtgaacgacgtagttgcgcccttggtgttcgaagtccgctactcgctggcgcac
ggcgaaacggcggaaggcgagcggaggggcgccagccggaggaggaggagcgactccccc
gggggtggcaacaacactggcagcagcggcagcagcggcggcggcggcggcggcggtggt
ggtggtgacgatgatgacgatgacctccccgcactgcgacctgtcatcagatggagggag
cgacacagagattcggcgagaagtgtgacaaagtttgagaggaactgtcacacagacgtg
tgcccggctgacctcagagtgaacgggaccctggtcctccccaggctgctgtctgaccgc
ccctacctggtggtgggtgaggtgcactccctgcgcgtcaacctgagcctgggcaacgtg
ggggaggacgccttcgaccccacgctgcgcatgcacttccaccgggatctcttcctcgtc
aacgcctgggacacggaggaggaaaaggcgctgagctgtgaggtgctggaggggaatttg
ctgcagtgcagcgtggggttccccttcctcaagtctcacaccaagcgggaagtgagcgtg
ctgttcgacagcagccagctgagtggcgaggacgatctgctcgagttcagcgctcagatc
accagtcagaacatcgagcacaacgagaccctggacgacaaccaggagctgctgtccatc
cccctccgctacgaggtggacaccaccctgcacggctcggtgtcccagacgtcgattctg
tacggaggcgacttgtcagaccgcgaggccgtagcactgcccggccagccgtgtcacttc
cagtggctcaacttcaccttccaggcattgaacctgggccctagtcaggcccctggggcc
tttctcgaggtgctcatcccgtctcgcctgcaccccgaggggccgcacgccctgcagctg
cacgaggtgcaggtgtccccgggtggggggtcgtgcctggggccggcgctgggggccgtg
tgcgtgacgcccgagcagcacagcgagagcgtctaccagctgttcagcttcttcagcaag
agtgggcgcaagctgctggactgtgcgtcgtggccggagggctgtgtggcggtgcgctgc
gagctgggacccttcgccccgggagagacgcccagcgtcagcgtcaaggcgctgctcaac
actgacatcttgcagcaggagagctcctccgtgatccagttctcggcgcgtgccgaactc
cgcgtgccgcactcggaccgagtggtggagctctccaccggcgcgccggggaccatcgcg
gtggtgttcgaggctcttcacgacctcagaccccgcggcttcatcgccgtctggatcatc
gccatcagcctcatcatcggcctcctcatcctcatcctcctcatcgtgctgctctggaag
ctgggattcttcaagcggaacctcaaggaggagctggagatgcagcgagctcgcaagaag
agctgggactgggtcaagatggccgagtag
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