Petromyzon marinus (sea lamprey): 116955556
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Entry
116955556 CDS
T09614
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04080
Neuroactive ligand-receptor interaction
pmrn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116955556
04082 Neuroactive ligand signaling
116955556
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116955556
Ion channels [BR:
pmrn04040
]
Ligand-gated channels
GABA-A
116955556
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116955556
NCBI-ProteinID:
XP_032832588
UniProt:
A0AAJ7U9Y7
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Position
60:3298399..3312284
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AA seq
580 aa
AA seq
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MAAKRISPTKPITAAAFHRQNRRRALIVQSASSSSSRRRRVTAPAGHEAACLRPPPPRSS
PPPHRDHLHHHRHVVAVNGDGGGQTAPVSRVRDGRAAWGVVAPDRVVPGAAVMACALRLA
WLLLAGVTAVACRREPRPAPPGERTTPAPSGPHPSRHGRRTDGARGRGTKSEQQLRIGEH
DFTMRPGFGGPAIPVGLDVQVESIDSISEVDMDFTMTLFVRHTWRDERLAFPSSSNRSMT
FDSRLVKKIWVPDVFFVHSKRSFIHDTTTDNVMLRVYPEGHVLYSMRITVTAMCNMDLSR
FPLDTQTCALELESYAYTEDDLMLYWKNGNASLSMDEDISLSQFLIQEFMTTSRLAFYSS
TGWYNRLFISFTLRRHVFFYLLQTYFPALLMVMLSWVSFWIDRRAVPARVSLGITTVLTM
STIITGVNASMPRVSYVKAVDVYLWTSFVFVFLSVLEYAAINYLSTLQERRQRCAWKRIM
NACVSLQPVPLPYDAQARPGGHRGSMALLGDPPAAPSATDGGADRGVLGRGGRYLERQRE
YLGRVGAVILQRSHAIDSYSRVLFPASYILFNVVYWAVLS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaagcggatttcaccgacaaagccgattacagccgctgccttccatcgccaa
aataggcgcagggctctcatcgtacaatccgcctcgagcagcagcagcaggaggaggagg
gttactgcacccgctgggcatgaggctgcgtgtctgcgaccaccaccaccacgatcatcg
ccaccgccacaccgcgaccaccttcaccaccaccgccacgtggtggcggtaaacggagat
ggaggcggacagacagcgcccgtgagcagggttcgtgacgggcgggcagcttggggtgtc
gtggcgccggatcgagtcgtcccgggtgcggcggtgatggcgtgcgccctgcggctggca
tggctcctcctggccggcgtgaccgccgtggcgtgccggcgcgagccgcggccggcgccg
ccgggcgagcggacgaccccggcgccctccggccctcatccgagccgccacggcagacgg
acggacggggcgcggggccgcggcaccaagtccgagcagcagctgcggattggagagcac
gactttaccatgaggcccggcttcgggggccccgctatccccgtgggcctcgacgtgcag
gtggagagcatcgacagcatctccgaggtggacatggacttcacgatgacgctgttcgtg
cgccacacatggcgggacgagcggctggccttccccagctccagcaaccgcagcatgacc
ttcgacagccgcctcgtcaagaagatctgggtgcccgacgtcttctttgtgcactccaag
cgctccttcatccacgacacgaccaccgacaacgtgatgctgcgcgtctaccccgagggt
cacgtcctctacagcatgaggatcacggtaacggctatgtgcaacatggacttgagccgg
tttcctctggacacgcagacgtgcgccctggagctcgagagctatgcctacacggaggac
gacctgatgctctactggaaaaacggcaacgcctctctctccatggacgaggacatctcc
ctctcccagttcctcatccaggagttcatgaccacgtcccgcctcgccttctacagcagc
acaggctggtacaaccgcctcttcatcagcttcacgctgcgccgtcacgtcttcttctac
ctgctgcagacgtacttccccgcgctgctcatggtcatgctctcctgggtctccttctgg
atcgaccgccgggccgtccccgctcgcgtctccctgggcatcaccacggtgctcaccatg
tccaccatcatcacgggcgtcaacgcgtcaatgccacgcgtctcctacgtgaaggcggtg
gacgtctacctgtggacgagcttcgtcttcgtcttcctctccgtgctcgagtacgcggcc
atcaactacctgagcaccctgcaggagcggcgccagcgctgtgcctggaagaggatcatg
aacgcctgcgtctccctacagcccgtgcctctgccgtacgacgcgcaggcccgccccggc
ggccaccgcggctcgatggccctgctgggcgacccgccggcggcgccgtccgcgacggac
ggcggcgccgaccgcggcgttctgggccggggcgggcggtacctggagcggcagcgcgag
tacctgggccgggtaggcgccgtcatcctgcagcggtcgcacgccatcgactcgtactcg
cgcgtcctcttccccgcctcgtacatcctcttcaacgtcgtctactgggccgtgctgtcc
tag
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