Paenibacillus mucilaginosus KNP414: KNP414_01106
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Entry
KNP414_01106 CDS
T01550
Symbol
csd
Name
(GenBank) Csd
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pms
Paenibacillus mucilaginosus KNP414
Pathway
pms00450
Selenocompound metabolism
pms01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pms00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
KNP414_01106 (csd)
Enzymes [BR:
pms01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
KNP414_01106 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
KNP414_01106 (csd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
AEI39674
UniProt:
F8FCV2
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All DBs
Position
1112982..1114208
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AA seq
408 aa
AA seq
DB search
MNIEEIRRQFPILHQEVNGHPLVYLDSAATSQKPTAVIEAVKNYYEWDNANVHRGVHTLG
SRATDAYEGAREKLRRFINARSTEEIIFTRGTTTAINLVASSYARAVCKEGDEIVITPME
HHSNLIPWQQVAQATGAVLKYIPLQQDGSISLEDVEKTITEKTKMVSVMYVSNVLGVVNP
VKEIAAIAHRHGAKMLVDGAQSTPHLKVDVQELDCDFYALSGHKMCAPTGIGALYGKKEL
LQEMEPIEFGGEMIDHVGLYNSTWKDLPWKFEGGTPIIAGAVGLAAAIDFLESIGMENID
RHEKQLTSYALERMVEIEGLTIYGPGQDRAGLVTFNLDDVHPHDVATVLDAEGVAVRAGH
HCCQPLMRWLNVTATARASFYLYNTEADVDRLITALIKTKEYFGHVST
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgaggagatccgtcgacagttcccgattcttcatcaggaagtgaacggccat
ccgctcgtatatttggattcggcggctacctcgcagaagcccacagcagttatcgaagcc
gtcaagaactattacgagtgggataatgcgaacgtgcaccgcggcgtgcatacgctgggc
tcccgggcgaccgacgcttatgaaggggcgagggagaagctccgccgtttcattaatgct
cggtctaccgaagaaattatttttacgcggggaacgacaacggccattaacctggtcgcc
tcgtcctatgccagggcggtgtgcaaggagggtgatgagattgtcatcacccccatggag
caccacagcaacctgatcccttggcagcaggtggcgcaggcgaccggtgcggttctcaaa
tatattccgctgcagcaggacggatcgatctcgctcgaagacgtggaaaagacgattacg
gagaagacgaagatggtctccgtcatgtacgtctccaacgtgctcggcgtcgtcaatccg
gtgaaggagattgcggccatcgcccaccgtcacggcgccaagatgctggtcgacggggcg
cagagcacaccgcatctcaaggttgacgtgcaggaactggactgcgacttttatgccctc
tccgggcataagatgtgcgcacctaccggtatcggggcactctatggtaagaaagagctg
ctccaagagatggagccgatcgaattcggcggagagatgatcgaccatgtgggcctgtac
aactccacgtggaaggatcttccgtggaagttcgagggcggcacgccgattatcgcaggt
gccgtcggtctcgcggccgcgatcgatttcctggagagcatcggcatggagaacatcgac
cggcatgagaagcagctgacctcctacgcgctcgagcgcatggtggagatcgaaggactg
acgatctacggcccgggccaggatcgtgcaggactcgtcacattcaatctcgacgatgtg
catccgcacgacgtcgctaccgtgctcgatgccgaaggcgtagccgtccgtgccggccac
cactgctgccagccgctgatgcgctggcttaatgtcaccgctacggctagagccagcttt
tatctgtacaataccgaagccgatgtagaccgactgatcaccgctcttatcaaaacaaag
gagtacttcggccatgtctcaacttga
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