Podarcis muralis (common wall lizard): 114592014
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Entry
114592014 CDS
T06059
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
KO
K12009
tripartite motif-containing protein 27 [EC:
2.3.2.27
]
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmua04121
]
114592014
Enzymes [BR:
pmua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114592014
Ubiquitin system [BR:
pmua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114592014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
Prok-RING_4
Baculo_IE-1
zf-RING_10
U-box
Sina_RING
zf-RING_4
zf-RING_6
zf-UDP
Motif
Other DBs
NCBI-GeneID:
114592014
NCBI-ProteinID:
XP_028575652
LinkDB
All DBs
Position
2:110981846..110994894
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AA seq
530 aa
AA seq
DB search
MEAEGAIEGLCEEATCSICLEYFIDPVTIACGHNFCQACFDQLWEDPNVDSCCPQCRERI
KQRNFRPNRQLANMVEIVRNFQERKGLKRKWEEPQRQQEPRKLFWRDDQAPGGVVWDRLH
ADQGHTASSISKSSVKYKAQLEAEKQKIRSAFQRMQVFLRAKQRLWLGELGDLEKKIWRR
GEGNFAELSGELSRLRNLIVATEARNVQPSYHVFQPPRESLQDIRRALTRCEKKASEHES
DLSHWWDETLKIAVEKSSALEKATEKYKASLEQVQDTAPLMQDLNKVDVTLDANTAHPCL
TVSEDLKSVWWEVEKKRKGGKKKKKKSNNRGATGNLPDNPERFNGELCVLGQEGFTAGKH
WWVVEVETWGRAMWAVGVARDTMRRKGVICTHTNEGVWAVGRFSRSPSRPCQFFAFTFPT
PTPLALAKEPQKIRVSLDYERGQVQFSDADTDGLIFTYHTGSFSEEKLRPFFQVRSCGTA
LKCWPRSPAAVNGNDNARTATGNRWFLDEVRLQRPPAAEAFHIDQGWWEF
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgagggtgctattgaggggctctgcgaggaggcgacatgttccatctgcctg
gagtacttcatagacccagttacaatcgcttgtgggcacaacttctgccaagcctgcttt
gaccaactttgggaggaccccaatgtagactcctgctgccctcagtgtcgagagaggatc
aagcaaaggaacttcaggccaaaccgtcagctggcaaatatggtcgagatcgtcaggaac
ttccaggaaaggaaaggattgaagagaaagtgggaagagccccagaggcagcaggagccc
cggaaattattctggagggatgatcaggcaccagggggtgtggtttgggaccggttgcac
gctgaccagggccacaccgcgtcttctataagcaagagctccgtaaaatacaaggcgcag
ttagaagcagagaagcagaaaatcagatccgccttccagagaatgcaggtatttctccgt
gcaaaacagcgtctctggctaggtgagctgggagatctggagaaaaagatttggaggagg
ggtgaaggaaactttgccgaactctctggggagctttcccgactcagaaacttgatcgtg
gcgacggaggcgagaaacgtgcagccatcataccacgtcttccagcccccgagggaatcc
ctccaggacatcagaagagccttaacgaggtgtgagaagaaagcatctgagcacgaatcg
gacctttctcactggtgggacgagacgctcaaaatagctgtggagaaaagttctgccctg
gaaaaggctacggagaaatataaagcgtctctggagcaagttcaagacacagctcctctg
atgcaagaccttaacaaagtggatgtcaccctcgatgcaaataccgcacacccttgcctt
accgtctctgaggatttgaagagtgtgtggtgggaggtggagaagaagaggaagggggga
aagaagaaaaagaagaagagcaacaacagaggggcgacggggaacctccctgacaaccca
gagagatttaacggggagctctgtgtgctgggccaggaggggttcacggcagggaaacat
tggtgggtggtggaggtggaaacctgggggagggcaatgtgggctgtgggggtcgcccga
gacaccatgaggaggaaaggcgttatctgcacccatacgaacgaaggggtgtgggcggtg
gggaggttttcccgcagcccatctaggccttgccagttctttgctttcaccttccccaca
ccgacccctttggccttggcgaaagaaccccagaagatccgcgtgtccctggattacgaa
aggggtcaggtgcagttttctgacgccgacaccgacggtttgattttcacctaccacacg
gggtcgttctctgaggagaagctccggccctttttccaagtgaggagctgtgggacggct
ttgaagtgctggcctcggagccccgctgccgtgaacggaaatgacaacgccagaacagcg
acggggaaccggtggttcttggatgaagttagactccaacgcccaccagctgcggaagcg
ttccacattgatcaggggtggtgggagttctga
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