KEGG   Podarcis muralis (common wall lizard): 114600767
Entry
114600767         CDS       T06059                                 
Symbol
SEH1L
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
pmua  Podarcis muralis (common wall lizard)
Pathway
pmua03013  Nucleocytoplasmic transport
pmua04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:pmua00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114600767 (SEH1L)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    114600767 (SEH1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmua03019]
    114600767 (SEH1L)
   04131 Membrane trafficking [BR:pmua04131]
    114600767 (SEH1L)
Messenger RNA biogenesis [BR:pmua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     114600767 (SEH1L)
Membrane trafficking [BR:pmua04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    114600767 (SEH1L)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 ANAPC4_WD40 WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_Vps41 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 114600767
NCBI-ProteinID: XP_028593241
LinkDB
Position
7:51911920..51926211
AA seq 464 aa
MFVARSIAADHRDLIHDVSFDFHGRRMATCSSDQSVKVWDKGENGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWTRRCVISTNFSASAVPH
RISYTNLKSSSTLRSRFLGGVGSCREEVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSAD
GVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHAPMIAVGSDDSSPNVLAK
VQIYEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHILAVATKDVRIFTLKPLRKE
LTSSSGLTKFEVQLVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWKANYMDNWKCT
GILKGNGSPVNASSTQQGVFNAPLGTANSSLQNSVNGTSAGRYFFPPLDSPRAGSRWSSY
AQLLPPAPLIEHSCDAATANLQYPHPRRRYISRPLNLLREHEGV
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgttcgtggcgcgcagcatcgcggccgaccaccgcgacctcatccacgacgtttccttc
gacttccacgggcggcgcatggcgacctgctccagcgaccagagtgtcaaggtttgggac
aaaggtgaaaatggagaatggcactgtactgccagctggaagacacatagtggatctgtg
tggcgtgttacatgggcacatccagagtttggacaggtcttggcttcctgctcttttgac
agaacagctgctgtatgggaagaaatagtaggagaatcaaatgataaacttcgagggcaa
agtcattggacaaggagatgtgtgatttctaccaacttctctgcatctgcagtcccacat
cgcatatcctacaccaatctcaagagttcctcaactctcaggagcagatttttgggaggt
gtagggagttgcagagaggaggtgaagaggactactctggttgacagtaggacatcagtt
acagatgtaaagtttgctcctaagcatatgggcctcatgctggcaacatgttcagcagat
ggagttgttaggatatatgaagcaccagatgttatgaatctcagtcagtggtcacttcag
catgaaatctcatgtaaactaagctgcagttgtatttcttggaatccttcaagctctcgc
gctcatgcacctatgatagctgtaggaagtgatgacagcagcccaaatgtactggcaaaa
gttcagatttatgaatacaatgaaaataccaggaagtatgcaaaagcagaaacacttatg
acagtcacagaccctgtgcatgatattgcatttgctccaaacctgggaaggtccttccat
atattggctgtagctaccaaagatgtgcgaattttcacattaaaaccactaagaaaggaa
ctgacttcttcatcaggcctgacaaaatttgaggtccagttagtggctcagtttgataac
cacaattctcaggtctggcgtgtaagttggaacattacaggcacagtgcttgcatcttca
ggagacgatgggtgtgtaaggctttggaaagctaactacatggacaactggaagtgtact
ggaattttgaaaggtaatgggagtccagtcaatgctagttccactcagcagggagttttt
aatgctcctttgggcacagccaattcaagcctccagaattcagtaaacggaacatctgct
ggcaggtatttctttccccctctggattccccacgggctggatcaagatggtccagttat
gcccagctcctacctcctgctcctctgatagagcactcttgcgatgctgccactgccaat
ctccagtatcctcaccctcgcagacgatatatctctcgacctcttaaccttttacgggaa
catgaaggggtttaa

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