Pseudomonas mucidolens: NCTC8068_01116
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Entry
NCTC8068_01116 CDS
T08935
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud02024
Quorum sensing
pmud03060
Protein export
pmud03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NCTC8068_01116 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NCTC8068_01116 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC8068_01116 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmud02044
]
NCTC8068_01116 (ffh)
Enzymes [BR:
pmud01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NCTC8068_01116 (ffh)
Secretion system [BR:
pmud02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NCTC8068_01116 (ffh)
Eukaryotic Sec-SRP protein
NCTC8068_01116 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
APS_kinase
AAA_33
cobW
YqeC
KTI12
AAA_24
ParA
AAA_31
nSTAND3
Thymidylate_kin
ABC_tran
6PF2K
AAA_18
AAA_5
AAA_19
AAA_17
AAA_16
NACHT
AAA_14
Motif
Other DBs
NCBI-ProteinID:
SQH32161
LinkDB
All DBs
Position
1:1244693..1246069
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AA seq
458 aa
AA seq
DB search
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSVKERAV
GTEVSRSLTPGQAFVKVVQAELESLMGVANEDLNLSAVPPAVVLMAGLQGAGKTTTAGKL
ARFLKERKKKSVMVVSADVYRPAAIKQLEMLAGEIGVTFFPSDLSQKPVDIANAAIKEAK
LKFIDVVIVDTAGRLHIDDEMMGEIKALHAAINPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEALEPFHPERIASRILGMGDV
LSLIEQAEQTLDKDKADKLAKKLKKGKGFDLEDFRDQLQQMKSMGGLGGLMDKLPNIGGV
NLAQMGNAQGAAEKQFKQMEAIINSMTPAERRDPELISGSRKRRIAMGSGTQVQDIGRLI
KQHKQMQKMMKKFSAKGGMAKMMRGMGGMMPGRGMPKM
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatctgactgaccgtctctcgcagacgctgcgccatgtcaccggcaaggcc
aagctgaccgaggacaatattaaagacaccctgcgcgaagtgcgcatggcgttgctggaa
gccgacgtggccttgcctgtggtcaaggacttcgtcaactcggtcaaggagcgtgcggtc
ggcaccgaagtgtcccgcagcctgacgccgggccaggcctttgtgaaggtcgtccaggcc
gaactcgaaagcttgatgggcgtggccaacgaagatttgaacctcagcgccgtgccgccg
gcggttgtgctgatggccggtttgcagggcgcgggtaaaaccactaccgccggcaaactc
gcgcgcttccttaaagagcgcaagaaaaaatcggtgatggtggtctcggctgacgtttac
cgtccggcagccatcaaacagttggaaatgcttgccggcgaaatcggcgtgaccttcttt
ccgtccgatctgagccagaaaccggtcgacatcgccaacgctgctattaaagaagcgaag
ctgaagttcatcgacgtggtcatcgtcgataccgccggtcgcctgcatatcgatgacgag
atgatgggcgagatcaaggcgctgcatgccgcgatcaatccggtcgagacgctgttcgtg
gtcgacgccatgaccggccaggatgcggccaacaccgccaaggcgttcggtgatgcgctg
ccattgacgggtgtgatcctgaccaaggtcgacggtgatgcccggggtggtgccgcattg
tcggtacgtgcgatcactggcaagccgatcaagttcatcggcatgggggagaagagcgaa
gcgctcgagccgttccatcccgagcggatcgcctcgcgtatcctcggcatgggcgacgtg
ctcagcctgatcgagcaggccgaacagacgctcgacaaggacaaggccgacaaactggcc
aagaaactgaagaagggcaagggcttcgacctcgaagacttccgtgaccagttgcaacaa
atgaagagcatgggtggtcttggtggcttgatggacaagctgccgaacatcggtggcgtg
aacctggcgcaaatgggcaatgcccagggcgcggcagagaagcagttcaagcagatggaa
gccatcatcaattccatgactccggccgagcgccgcgaccctgagctgatcagtggttcg
cgcaaacgtcggatcgccatgggttccggcacccaggtgcaggatatcggtcgcttgatc
aagcagcacaagcagatgcagaagatgatgaagaagttctccgccaagggcggtatggcc
aaaatgatgcgcggcatgggcggaatgatgcctggtcgcggcatgccgaagatgtaa
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