Prunus mume (Japanese apricot): 103325634
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Entry
103325634 CDS
T03196
Name
(RefSeq) DNA topoisomerase 6 subunit A-like
KO
K10878
meiotic recombination protein SPO11
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmum03036
]
103325634
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
103325634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
Motif
Other DBs
NCBI-GeneID:
103325634
NCBI-ProteinID:
XP_008226042
UniProt:
A0ABM0NK95
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Position
LG3:complement(7622434..7623078)
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AA seq
214 aa
AA seq
DB search
MAVFIAGDLRFCQNGRGMVDCANARGREVTLSDVDSSGGDMTSNAEYIILVVGSYGAYFR
LTKDEVDRRFPCIIVYTPDPVPEEDTISFVRKMKEELDLPVLAIAESSPRLVKNFSLFVA
GGCDIKWLGLRPSDVVALKMHPRCMRPMNSKDFKLAQRLLEKDAVVKQRPEWVEELKKMV
ETRSKVEVEALAPLGRSFLSNVYFPDKMVAQDWI
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctttattgcgggcgatcttcgtttctgtcaaaatgggcggggtatggttgat
tgtgcgaatgcccgtgggcgagaggttactctgagcgatgtcgatagcagcggtggtgac
atgacgagcaacgcagagtacataatactggtggttgggagttacggggcttactttcga
ttgacgaaggatgaggttgaccgtaggtttccttgtatcattgtctacacaccagacccc
gtgcccgaagaggatacgatctcctttgtaaggaaaatgaaggaggagttggatctccca
gtgttagccattgccgagagtagtccacggttggtgaagaatttctctcttttcgtagca
ggaggatgcgacataaagtggttgggactccggcctagtgatgtggtggcgttaaaaatg
catccacggtgtatgcggccaatgaatagcaaggattttaagctagcgcaacgtctcttg
gaaaaagatgcagtcgtgaagcaacgtccggaatgggttgaggagctcaagaaaatggtg
gagacccgtagcaaagtagaagttgaggcgttggcccccttagggaggagcttcttgtcc
aatgtttattttccagacaagatggtagcacaggattggatatga
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