Prunus mume (Japanese apricot): 103328660 Help Entry 103328660         CDS       T03196                                  Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism pmum  Prunus mume (Japanese apricot) Pathway pmum03013   Nucleocytoplasmic transport pmum03040   Spliceosome Brite KEGG Orthology (KO) [BR:pmum00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     103328660   09122 Translation    03013 Nucleocytoplasmic transport     103328660  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pmum03019]     103328660    03041 Spliceosome [BR:pmum03041]     103328660 Messenger RNA biogenesis [BR:pmum03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      103328660 Spliceosome [BR:pmum03041]  Complex C   Other components    EJC/TREX     103328660  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     103328660 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  103328660 NCBI-ProteinID:  XP_008229290 UniProt:  A0ABM0NSS5 LinkDB All DBs Position LG4:complement(13061534..13081914) Genome browser AA seq 1859 aa AA seqDB search MSMSLPPVERAYVREDCVREWKNGTSNFKLADPVPMLRFLYELCSTMVSGELPLQKCKAA LDSVEFSDKVSDEELASSFADIVTQLSQDIRMPGEHRARLIKLAKWLVESSLVPLRLFQE RCEEEFLWEAEMIKIKAQELKSKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCQNSE TSSHNAAATIGIIKSLIGHFDLDPNHVFDIVLECFELQPDSNVFLELIPIFPKSHASQIL GFKFQYYQRLEVNSPVPFGLYKLTALLVKEDFIDLDSIYAHLLPKDDEAFEHYSAFSSKR LDEANKIGKINLAATGKDLMDDEKQGDVTIDLFAALDMETEAVGERSTECENNQTLGLLT GFLSVNDWYHAHLLFERLSPLHPVEHIQICNSLFRLIEKTISSAYDTVRRAHLLSFGSSS GTSVDVINTENSSRHGSFVDLPKELFQMLACAGPYLYRDTLLLQKVCRVLRGYYSSALDL VSSGERVVDPSYVFVGNPRLHLKEAKSRIEEALGTCLLPSLQLVPANPAVGQEIWEVMSL LPYEVRYRLYGEWEKEDERIPMVLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHAN PMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDVLEYVVIERLAQGGRDKLKEDGLNV SDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVHYTEN LTEDQLDAMAGSETLRYQATSFGVTRNNKALIKSTNRLRDSLLPKDESKLAIPLLLLLAQ HRSVVIIDADAPYIKMVSEQFDRCHGTLLQYVEFLCSAVTPTSAYAQLIPSLDDLVHQYH LDTEVAFLIYRPVMRLFKCRGSSDVFWPLDNNDTQGITSANSESEAAEHSGNLVLDVGSP SKPVTWLDLLNTVKTMLPPKAWNSLSPDLYATFWGLTLYDLYVPRNCYESEIAKQHAALK ALEELSDNSSSAITKRKKDKERIQESLDRLTSELRKHEENVASVRKRLSREKDKWLSSCP DTLKINVEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDILICRTLQPM ICCCTEYEVGRFGKFLQETLKIAYYWKKDESIYERECGNMPGFAVYYRHPNSQRVAYFQF MKVHWKWSQRITKLLIQCLESTEYMEIRNALILLSKISSVFPVTRKTGVNLEKRVSKIKA DEREDLKVLATGVAAALAARKSSWITDEEFGNGYLELKSAPLASKSSAGNSAATHSGSTI NISQSEPIGGKVGALPSQHPESSNSVKDQILKTKTSDGRLERAESISTVKSDQGHLKLKG GSLVSGSDAQSPMPSAALQSGTSRSMENKKQVNESSNRTSDENMGKAAPKNSSESELRAQ AKRSGPAGLLAKPPKQDLAKDDGRSGKGIGRDVLCHASAVSTNVSPAIAANGNTVSASAK GSFAKTSVEIHGIESKVDVGAAKASNTRVSAPKEDGPETSDALRPHSSRLVHSPRHDNSA SASKSTDRQSKRRKGETEMRDFEGEARLSDRERSVDARLLDLDKSGTDDQSVYKASDKPS DRSKDKGSERHEKDYRERLDRPDKSRGDDLGERSRDRSMERHGREHSVEKVQERGMDRSV DRLSDKSKDDRGKVRYNDISTEKSHVDERYHGQSLPPPPPLPPHMVPHSVSSGRRDEDAD RRFGTTRHTQRLSPRHDEKERRRSEDNSQDDSKRRREDDFRDRKREDREGLSIKVEERER EREREKANLLKEETDAIAASKRRKLKREHPPSGEPGEYSPVPPPPPPPLSISLSQSYDGR DRGDRKGPPVQRAGYLEEPSARIHGKEAASKMTRRDPDPMYEWEDEKRQRAEQKRRHRK NT seq 5580 nt NT seq  +upstreamnt  +downstreamnt atgagcatgtctctcccacccgtagagcgtgcatacgttagagaggactgcgttcgtgaa tggaagaatggaacctctaatttcaagctcgcagaccccgttcccatgcttcgattcctc tacgagctctgctccaccatggtttctggggaattgccattgcagaagtgtaaagcagcg ttggattcagttgagttctccgataaggtttcggacgaagagttggcttccagttttgcg gatattgtcacccaattgtctcaagatattagaatgcctggagagcatcgtgctcgtctt ataaaattggctaaatggttggtggaatcttccttagttccattgagacttttccaggaa cgctgtgaggaagaatttttgtgggaggctgaaatgatcaagataaaggctcaggaattg aagagtaaagaggtcagagtaaacacccgtcttctatatcagcaaacaaagtttaacctt ctacgagaagagagcgagggctatgccaagctagttacccttctttgccaaaactcagaa acttcatcacacaatgcagcagcaacaataggcattataaagtcattaattggacatttt gatctggatccaaatcatgtctttgatattgttttggagtgctttgaacttcagccagat agtaatgtatttttggagctgataccaatttttccgaagtctcatgcttcacaaatcctt ggttttaaatttcaatattatcagcgtttggaagtaaatagtccggtgccatttggactt tataagcttacagctttgttggtgaaggaggactttattgatcttgatagcatatatgct catctacttcccaaggatgatgaagcatttgaacattatagtgctttctcttccaagcga cttgatgaggctaacaaaattggtaaaataaatcttgctgctaccgggaaggatctcatg gatgatgagaaacaaggagacgtgacaatagacctctttgctgctctagacatggaaaca gaggcagttggtgagcggtctacagagtgcgaaaataatcaaactttgggcttgctcact ggttttctttctgtaaatgactggtaccatgcacatttgctatttgagcgtctctcacct ctacatcctgttgaacatattcaaatctgtaatagcttgttcaggctcattgaaaaaaca atctcttctgcatatgacactgttcgccgagcacatctcctaagttttgggtcttcctca ggaaccagtgttgatgtaattaatacagaaaattcatccagacatggatcatttgttgac cttcccaaagaactttttcagatgcttgcttgtgctggaccctatctttatcgcgatact ttgttgcttcagaaggtatgtagagtattgagaggttattactcatctgcacttgatctt gtaagcagtggtgaacgagtcgtggatcccagttatgtttttgtcgggaatcctcgtctg caccttaaggaagcaaagtcaaggatagaggaagccttgggaacatgtctacttccttct ttacaattggtacctgcaaatccagccgttggacaggaaatctgggaagtgatgagtcta ctcccctatgaggtgcggtatcgtttatacggtgagtgggagaaagaagatgagcgcatt cctatggttttagccgcaaggcaaacagccaagttggacactagaagaattttgaaacgc cttgcaaaagaaaatttgaagcagctaggtcggatggttgcgaagttagctcatgcaaat ccaatgaccgtacttagaacaattgttcatcagattgaggcgtacagagatatgattact cctgttgtagatgcatttaagtatttgactcagctggagtatgacgttttggaatatgtt gtgattgagcgtcttgcacaaggagggcgtgataagctaaaagaggatggccttaacgtg tcagactggcttcaatctttggcttcattttggggtcacttgtgtaagaaatacccatct atggaattgaggggccttttccagtatcttgtgaatcaactgaaaaagggccaaggaatt gagctggttctccttcaggagcttattcagcaaatggcaaatgtccattacaccgagaat ctgactgaggatcagctggatgccatggcaggcagtgagactcttcgttatcaggcaact tcttttggtgttactcgcaataacaaggcattaatcaagtccactaacaggctaagggac tcgctgctcccaaaggatgaatcgaagctggcaataccccttttgttacttcttgctcag catcgttctgtggtcataatagatgctgatgcaccttacattaagatggttagtgagcag tttgatagatgtcatggaactctccttcaatacgtggaatttctttgcagtgctgtgaca ccgacatcagcatatgctcagctaattccttcacttgatgatcttgtccatcaataccat cttgatactgaggttgctttcttaatttatcgccctgtaatgaggctcttcaagtgccgt gggagttccgatgtcttctggcctctagacaataatgacactcagggtatcacctctgca aattcagagtctgaagctgctgagcattctggaaatttggttctggatgttggctctcca tcaaagcccgtaacgtggttggatcttcttaatactgttaaaacgatgttgcctccaaaa gcctggaatagcctctcccctgatctctatgcgacattttggggtctcacgctctatgat ctttatgtccctagaaattgttatgagtctgaaattgcgaaacagcatgctgctcttaag gctctggaagagctttctgataattcaagttcagcaataaccaaaaggaagaaagacaag gaaagaattcaagaatccctagatcgcctgactagcgaactccgaaagcacgaggaaaat gtcgcatccgttcgtaaacgtttatctcgggagaaggacaaatggttgagttcttgccct gatactttgaagatcaacgtggagttccttcagcgttgtatatttccacgctgtactttc agtatgccagatgctgtctattgtgccatgtttgtgcacactcttcattccctggggaca ccattttttaacacagtcaaccacattgatattctcatttgtagaaccttacagcctatg atatgctgctgtactgaatatgaagtaggtagatttgggaagtttctgcaggagacgttg aagatcgcatactattggaagaaggatgaatctatttatgaacgcgaatgtggaaacatg cctggctttgctgtatattatagacatccaaatagccagcgagttgcctatttccagttc atgaaggttcactggaagtggagtcaaaggattacaaagttattgattcagtgtctggaa tcaactgagtacatggaaattcgtaacgcactcatactgttgtcaaaaatttctagtgtt tttccagttacccgaaagacgggtgtaaatcttgaaaaacgggtttccaagataaaggct gatgagagagaggatcttaaggtgttggcaactggtgttgctgctgctttggctgctaga aagtcttcatggattacagatgaagaatttggtaatggatatcttgaattaaagtctgca ccacttgcttcaaagtcttcggctggtaattcagcagccacacacagtggttctaccatt aatatttctcaatctgaacctataggaggaaaagtgggagcccttccctcccaacaccca gaatcatcaaactcagtcaaagaccagattctgaaaaccaaaacctcagatgggaggttg gaaagagcagaaagtatctcaactgtaaaatctgatcaagggcatctaaaacttaaaggt ggctcattggtgagtggctccgatgctcagtcaccgatgccctcagctgctttacaatct ggaacatcaagatctatggaaaataaaaaacaagtgaatgaatcctcaaatagaacctca gatgaaaacatgggaaaagctgccccgaagaactcttctgaatctgagttgagagcccaa gcaaaacggtcaggtcctgctggattgcttgctaagccaccgaaacaggatcttgcaaaa gatgatggtagatctggaaaaggaattggcagagatgtcttgtgtcatgcatcagctgtg tctacaaatgtttctcctgccatcgcagcaaacggtaatacagtttcagcatcagctaaa ggttcatttgcgaagacatcagtagaaattcatggtattgaatcaaaggtggatgttgga gctgcaaaggcttccaatacaagggtttctgctccaaaggaggatggtcctgaaacttct gatgcactgaggccccattcttctcgacttgttcattctcctaggcatgataattctgct agtgcttcaaagtctactgacagacaaagtaaacggcggaaaggggaaactgaaatgagg gattttgagggcgaagctcgattgtctgaccgagagaggtctgttgatgctcgactgttg gatcttgacaaatcaggaaccgatgatcaaagtgtttataaggcctctgataagccttca gatcggtccaaagataagggcagtgaaagacatgaaaaggattacagggaaaggttggac cgtcctgataagtcacgtggagacgatttaggtgagagatccagggacaggtcaatggag agacatggaagggagcattcagtggagaaagttcaagagaggggtatggataggagtgtg gatagactctctgacaaatctaaggatgacagaggtaaagtaaggtacaatgatatatca acggaaaaatctcacgttgatgaacggtatcatgggcaaagcttacctccgccaccaccc ttacctcctcacatggttccacattcagttagttctggaagaagagatgaagatgcagat agaaggtttgggaccacaaggcatactcaaaggctttctccgagacatgatgagaaggag cgtagacgatctgaagataattcacaagatgattcaaaacgtagaagagaagatgatttt agagataggaagcgcgaagatcgtgaggggctgtcaataaaggtggaggagagggagagg gagcgagaaagggagaaagcaaacctcttgaaggaggagacagatgcaattgcagcttct aagaggcggaaacttaaaagagagcacccgccttctggggaacctggtgagtactcacca gttcctcctcctccaccacctcctctttctattagtttgtcccagtcatatgatggaaga gatagaggagaccggaaaggaccccctgtccagcgtgcagggtacttggaggaaccaagt gcgaggattcatggtaaagaagcagccagcaagatgactcgtcgtgaccctgatccgatg tatgaatgggaggatgagaaaaggcaaagagctgaacaaaagagaagacaccggaagtga

DBGET integrated database retrieval system