Prunus mume (Japanese apricot): 103334288
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Entry
103334288 CDS
T03196
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00450
Selenocompound metabolism
pmum00970
Aminoacyl-tRNA biosynthesis
pmum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
103334288
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103334288
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmum01007
]
103334288
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103334288
Enzymes [BR:
pmum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
103334288
Amino acid related enzymes [BR:
pmum01007
]
Aminoacyl-tRNA synthetase
Class I (U)
103334288
Transfer RNA biogenesis [BR:
pmum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
103334288
Prokaryotic type
Other AARSs
103334288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
Anticodon_1
C1_1
Motif
Other DBs
NCBI-GeneID:
103334288
NCBI-ProteinID:
XP_008235455
UniProt:
A0ABM0P7H8
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All DBs
Position
LG6:2408133..2411733
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AA seq
618 aa
AA seq
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MDDQSDGRQGNGRNLKLPVPGKRNILITSALPYVNNIPHLGTIIGCVLSADVFARYCRLR
GYNAVYICGTDEYGTATETKAREENCTPQQICDKYYAIHKEVYDWFDICFDEFGRTSTPQ
QTEVCQSIFKKLMENGWLTENTMQQLFCETCNRFLADRLVEGSCPMLDCNYDSARGDQCD
KCGKLLNPTELKDPRCKVCQARPCIRDTDHLFLELPLLKDKLEEYISDMSVAGSWSQNAI
QTTYAWLKEGLKSRCITRDLKWGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEKW
WKNPEDVELYQFMGKDNVPFHTVMFPSTLIGTGEKWTLMKSISVTEYLMYEAGKFSKSKG
IGIFGNDVQDTNIPVEVWRYYLLTNRPEVSDTLFTWTDLQAKLNTELLNNLGNFINRVLS
FIAKPQGLGYGSIIPDASGGESHSLTRRFAERIGICVDQYIEAMEKVKLKQALKIAMSIS
SEGNAYLQESQFWKLFKQDQASCSLVVKTSAGLVYLLACLLEPFMPSFSLKVLKELNLLP
ENQFSLRDENGDLEKAKKPWEILPAGHKIGTPDPLFKELKDEEVEAFRKKFSGSQAERVA
KGEAEARKLAEQLEQTKV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcaatcagacggcagacaaggcaacggcagaaatctgaagctaccggtgccg
ggaaagcgcaacatactcatcacaagcgccttgccatacgtcaacaacatccctcacctt
ggcaccatcataggctgtgttctgagtgctgatgttttcgctcgatattgtcgtcttcgt
ggatacaatgcggtgtacatatgtgggactgatgagtatgggactgcaacagagacaaag
gctagggaggaaaattgcactccacagcaaatttgtgacaaatattatgcaattcataaa
gaggtctatgattggttcgatatatgtttcgatgaatttggacgcacctccactccccaa
cagactgaagtttgccaatctattttcaagaaactgatggagaatggatggcttacagaa
aacacaatgcagcagctcttttgtgaaacatgcaatcgtttcttggctgatcggctagtt
gaaggcagttgtccaatgctagattgcaattatgactctgcacgaggggaccaatgcgat
aagtgtggaaagctgttgaatccaactgagcttaaggatcctagatgtaaagtatgtcag
gcaaggccatgtatacgtgacacagaccacttatttctagagctcccactgttgaaggat
aaattggaagaatatatcagtgacatgtctgttgcaggatcttggagccagaatgctatt
caaactacatatgcatggcttaaagaaggacttaaatcccgatgcattacgagggacctt
aagtggggggttcctgttccacacgaaaaatttaaggacaaggttttttatgtatggttt
gacgcgcccatcggttatatctccatcacttcgtgctacacgcctgattgggagaagtgg
tggaagaaccctgaagatgttgagctgtaccagttcatgggcaaggataatgtcccattc
cacaccgttatgttcccatctacgcttattggaactggagaaaagtggactttaatgaag
agcattagtgttaccgaatatttaatgtatgaagcagggaagttttccaagagcaagggt
ataggaatttttggcaatgatgtgcaagatacaaacattcctgtagaagtgtggcgatat
tacttgctaactaacaggccagaggtctcagatacattgtttacatggacggacttgcaa
gcaaaactaaatactgagctgctgaataacttgggaaatttcattaaccgagtgttgagc
ttcatcgcaaaacctcaaggactaggatatggatctattattcctgatgcttctggtggt
gaatcacattccttgacaagaaggtttgcagaaagaattggtatatgtgtggaccaatac
atagaagcaatggagaaggtcaagttaaagcaagcactgaaaattgcaatgagcatatcc
agtgagggcaatgcatatttacaagagagccaattctggaaacttttcaagcaagatcaa
gcttcttgctctcttgtcgtgaaaacttctgctggactggtttatctgcttgcatgcttg
ctagagcctttcatgccttcattttctctcaaggtgctaaaggagctcaatctgctgccc
gaaaatcaattttcgcttcgtgatgagaatggagatcttgagaaggcaaagaaaccatgg
gaaatattacctgcgggtcataagattgggacaccagatcctttgtttaaagaattgaaa
gatgaagaagtggaggccttcaggaagaagttttctggaagtcaagctgaaagggttgct
aagggagaagctgaagcaaggaaattagctgagcaattggagcaaacaaaagtttaa
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