Prunus mume (Japanese apricot): 103337676
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Entry
103337676 CDS
T03196
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103337676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103337676
03036 Chromosome and associated proteins [BR:
pmum03036
]
103337676
Spliceosome [BR:
pmum03041
]
Complex B
Other components
Prp19-related factors
103337676
Complex C
103337676
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
103337676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
TPR_14
HAT
Suf
TPR_19
TPR_16
TPR_2
TPR_CcmH_CycH
TPR_8
HAT_Syf1_M
TPR_17
Mad3_BUB1_I
BTB_2
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
103337676
NCBI-ProteinID:
XP_008239067
UniProt:
A0ABM0PFY0
LinkDB
All DBs
Position
LG7:complement(10300887..10305143)
Genome browser
AA seq
707 aa
AA seq
DB search
MGSFKDADPTLGFLTRKDTEVKLPRPTRVKNKTPAPVQITAEQILREARERQEAEIRPPK
QKITDPTELADYRLRKRKEFEDLIRRVRWNVNVWIKYAQWEESQKDFKRARSVWERALEV
DYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEIIGNVAGARQ
IYERWMNWMPDQQGWLSFIKFELRYNEVERARAIFERFVQCHPKVGAWIRYAKFEMKNGE
VVRARNVYERAVEILADDEEAEQLFVAFAEFEERCKETDRARSIYKFALDHIPKGRAEDL
YKKFVGFEKQYGDRQGIEDAIVGKRRFQYEDEVMKNPLNYDSWFDYIRLEESAGNKDRIR
EVYERAIANVPPAPEKRYWQRYIYLWINYALYEELDAGDMERTRDVYRECLKLIPHRKFS
FAKIWLLAAQFEIRQLNLKGARKILGTAIGQAPKDKIFKKYIEIELNLGNFDRCRKLYEK
YLEWSPENCYAWTKYAELEKSLCETERTRALFELAIAQPALDMPELLWKAYIDFELSEGE
FERTRELYERLLDRTKHLKVWISYAKFEASAIVEDGVDSDAAEDEAQDYPREQKEQCVQR
ARRVFEKALNYYRTSAPELKEERGMLLDEWLNMEASFGEVGDVSLVQSKLPKKLKKRRSI
ITEDGPAGYEEYIDYMFPEEAQTSNLKILEAAYMWKKRKVSSDDDED
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgggttccttcaaggacgcagacccaaccctagggttcttaacccgtaaggatactgag
gtcaagctaccacgacccactagggttaagaacaaaaccccggcccctgttcaaatcacc
gcagagcaaatcctccgtgaggcacgtgaacgccaggaggctgaaattcgacctcccaag
cagaagataactgatcccactgagctcgctgattatcgtctccggaagcgcaaggaattc
gaagacctaatccggcgtgtgaggtggaatgtcaatgtctggatcaagtatgcgcagtgg
gaggagtcccagaaggacttcaaacgtgctcgctctgtttgggagcgtgctcttgaggtt
gattaccggaaccacaccctgtggctcaagtatgccgaggtggagatgaagaacaagttc
atcaaccatgctaggaatgtgtgggaccgtgctgtcacgctcttgcctagagttgaccag
ctgtggtacaagtacattcacatggaagagattatagggaatgtggctggtgctcgacaa
atatacgagaggtggatgaattggatgccagaccagcaaggctggctctccttcatcaag
tttgagcttcggtataatgaagtggagcgtgctagagcgatttttgagcggttcgtacaa
tgtcatccgaaagttggtgcttggattcggtatgccaagtttgagatgaagaatggtgag
gttgtgagggcgagaaatgtatatgagagagcagtggagatcctggctgatgatgaggag
gccgagcagttatttgtggcttttgctgaatttgaggagcggtgcaaagaaactgatcga
gcaaggtctatttataaatttgcgcttgatcatatacccaaaggaagggccgaggattta
tataaaaagtttgtgggtttcgagaagcaatatggagatagacaaggcattgaggatgcg
attgtgggaaagaggagatttcagtatgaagatgaggtaatgaagaatcctcttaattac
gattcctggtttgattatataaggctagaagagagtgctggaaataaggacagaattaga
gaggtttatgagcgagctattgctaatgttcctccggctccagagaagcggtattggcag
cgctacatttatttgtggatcaattatgcactatatgaagagcttgatgctggagacatg
gaacgtacacgagatgtatatagggaatgccttaaactgattcctcataggaagttttca
tttgcaaaaatatggcttctcgctgcccagtttgagatacgacagctgaatctcaagggt
gcacgcaagatcctcggtactgcaataggccaagcacctaaagataagatatttaagaag
tatattgagatcgagctgaaccttgggaattttgatcgatgtcggaaattgtatgagaag
tatctggaatggtctccagaaaattgctatgcatggaccaagtatgcagagttagagaaa
tcactgtgtgagacagaacgaaccagggcgctttttgaacttgccatcgcccaaccagca
cttgacatgcctgagttgttgtggaaggcatacattgactttgaactatcagagggtgaa
tttgagaggactagagaactgtacgagagactcctagaccggacaaagcacctgaaggtg
tggatcagttatgcgaaatttgaggcgtctgctatagtggaagatggtgtggattcagat
gcggcagaagatgaggcccaggattatcctcgtgaacaaaaggagcaatgtgttcagcgt
gctcgaagggtttttgagaaagctctcaactattatagaacttcagctcctgagttgaag
gaggaaaggggcatgctgcttgatgaatggctaaatatggaggcttcctttggggaggta
ggtgatgttagcttagtccaatctaagctaccaaagaaactgaagaagaggaggtcaata
ataactgaagatgggcctgctgggtatgaggagtacatagactacatgttcccagaagaa
gctcagacatcaaacctcaaaatattggaagcggcctacatgtggaagaagcggaaggtt
tcctctgacgacgacgaggactaa
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