KEGG   Prunus mume (Japanese apricot): 103338727
Entry
103338727         CDS       T03196                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103338727
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmum03041]
    103338727
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103338727
Spliceosome [BR:pmum03041]
 Complex B
  Other components
   Prp19 complex
    103338727
 Complex C
   Prp19-CDC5 complex
    103338727
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    103338727
SSDB
Motif
Pfam: BCAS2 Plk4_PB2 CENPH
Other DBs
NCBI-GeneID: 103338727
NCBI-ProteinID: XP_008240186
LinkDB
Position
LG7:16064575..16066471
AA seq 254 aa
MANNSNSDILMLEAPPPQGPAWPGPLTNAETIDALPYIDDDYANPDVKREVDRMVEEELR
RSAKKPADFLKDLPPLPKPNFQDHPMLAREYDRVRASRPPAVIDFSRDKVETPPLNKMND
ETAWRLALQKAQCSLQHQVVRLENLELIDKYGPDAWIQNNNRLQLVFSRMQKLAQEQFQK
IETVNRERKYHQQNTAYELNALSAQWKELCQKNIEIHAACVKLESHLDELRREAADKGWN
LEANAENGSLLNSE
NT seq 765 nt   +upstreamnt  +downstreamnt
atggcgaacaacagcaacagtgacatcttaatgctagaagctccgccaccgcaaggtcca
gcatggccaggacctttaaccaacgccgaaaccatcgacgccttgccgtacatcgacgac
gactacgccaaccccgacgtcaaacgagaggtcgaccgcatggtggaggaggagttgcga
cgcagcgcaaaaaagcccgccgatttcctcaaagacttgcctccacttcccaagcccaat
ttccaggatcatcctatgctagctagagagtacgaccgcgtgagagcttccaggcctccg
gcggttattgatttttccagagacaaagtagagacgccgcctttgaataaaatgaatgat
gaaactgcttggagacttgctcttcagaaagctcagtgctctttgcagcaccaagtcgtc
aggttagagaatttggagctgattgacaaatatggtcctgacgcctggattcagaacaac
aatcgattgcaattggttttttcaagaatgcagaaattagctcaggaacaatttcaaaag
attgaaacagtgaatcgtgaaaggaaatatcaccagcaaaacactgcatatgagcttaat
gctctgtctgcccaatggaaggagctgtgtcagaagaatatagaaatccatgctgcatgt
gttaagcttgaaagtcatctggatgaattgaggagggaagcagccgataagggctggaac
ttggaagccaatgcagaaaatggttctctgttgaattctgaatga

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