Prunus mume (Japanese apricot): 103339811
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Entry
103339811 CDS
T03196
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103339811
Enzymes [BR:
pmum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103339811
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103339811
NCBI-ProteinID:
XP_008241385
UniProt:
A0ABM0PLM3
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Position
LG8:9261992..9264717
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AA seq
484 aa
AA seq
DB search
MVPRTCIVLIFLLCSFSSLATAFLNLTLPGQHPNPEEVVQEVHRKVNASLARRQMLQGTI
KYQDSSCLTGNPIDDCWKCDPNWPNNRQSLADCAIGFGQYALGGKGGEYYIVTDDSDDDA
VNPRPGTLRYAVIQTEPLWIVFPSNMLIKLSQELIFNSYKTLDGRGANVHIVGGGCITLQ
FISNVIIHNVHIHHCYPSGDANVRSSPSHYGYRTKSDGDGISIFGSKDIWIDHCSLSHCK
DGLVDAVMGSTGITISNNYFSHHNEVMLLGHSDDYLPDSGMQVTIAFNHFGEELVQRMPR
CRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPSNPNAKEVTKRVETAEGKWKD
WNWRSEGDILVNGAFFVASGKGVEFNYEKAYSVEPKSAVLIDQLIMHAGALGVGGRDNNL
GKWSSGSNGDGNGLGSGPDYTDDMSGSSSRNNPLPLSSTSTLFSFLISLSCLLFCILSQT
CISQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggttcccagaacctgcattgtcctgatctttcttctctgctcattttcttctcttgcc
acagcattcctcaacctcacacttcctggccaacatcccaacccagaagaagttgttcaa
gaagttcataggaaggttaatgcttctttggcaagaaggcaaatgctgcaaggaaccata
aaataccaggactcttcatgcctaacaggaaacccaatagatgactgttggaaatgtgac
ccaaattggccaaacaacaggcagagcttagcagattgtgcgattgggtttggccaatat
gctcttggaggcaaaggtggtgagtattatattgtcacagacgactctgatgatgatgct
gtgaatccaaggccaggcacactgagatatgctgtgatacagactgagcctctctggatt
gtgttccctagcaacatgctcatcaagctctcccaagagctcatcttcaacagctacaag
acccttgatggccgtggagccaatgtccacattgtgggtggtggctgcataacattgcag
ttcataagcaatgtcatcatccacaatgtgcatatccaccactgttatccgtcaggtgac
gctaatgtgcgttcaagcccatcccactacggctaccgcacaaaatcggacggtgatggg
atctccatctttggatccaaagacatatggatagaccattgcagcctatcacactgcaag
gatggtctggtagatgcagtgatggggtccacagggatcacaatatcaaacaactacttt
tcccaccacaatgaggtgatgcttttgggacacagtgatgactatttacctgactcaggc
atgcaagtgaccatagccttcaatcactttggtgaagaactggtgcagagaatgccaagg
tgcagaagaggctacatccatgtggtcaacaatgactttactcaatgggaaatgtatgca
attgggggcagtggaaatcccacaataaatagccaaggcaatagatatactgctccatca
aaccctaatgccaaggaggtgacaaagagggtggagacagcagaagggaaatggaaggat
tggaactggagatcagagggggacattttggtaaacggagcattctttgtggcttcaggg
aagggtgttgagtttaactacgagaaggcctacagtgtggagcccaagtctgctgttctc
attgaccagctcatcatgcatgctggtgcccttggagttggtggcagggacaacaacctg
gggaagtggagctccggatccaacggtgacggaaacggtttagggtcaggtccagactat
acggatgacatgtcgggaagtagcagcaggaacaatccactgccactttcatccacatcc
actctcttctcctttttgatctcattgtcatgcttgttattttgtatattatcccagaca
tgcatttcacaatga
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