Protobothrops mucrosquamatus (Taiwan habu): 107283149
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Entry
107283149 CDS
T05763
Symbol
APLF
Name
(RefSeq) aprataxin and PNK-like factor
KO
K13295
aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmur03400
]
107283149 (APLF)
DNA repair and recombination proteins [BR:
pmur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
107283149 (APLF)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
107283149 (APLF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHH
FHA_2
FHA
Motif
Other DBs
NCBI-GeneID:
107283149
NCBI-ProteinID:
XP_015666498
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MGVFLSKGSELLVTPERHASVQQIGGVYAKRDGRYVAVFSSPLWNLTSKGKCERPVAMSG
FHLVPLDGGCPLPLPLGETVIGRGSFLGVTDKKVSRKHAILKIVGDQLSIKPVHVNPCFY
WPVEDDQLFPLDKDKWHQLCPGDSFSLLVDKYIFKVLRTSLEKESLLRENGNLCVEDLPD
QIPTTLQSTMTSHSQPSEQSTIPSNKKQLPEVHSLMENATEIPEKFTLPKKEESRPAQRK
RQLPEWMLPTDLMASTQSTSKTGNNEEIKPDLRKKQKILESEDSTLLKEEVFTKDVAKKM
PKIGSKRISQKAESSVEQFNSQLDNEELDLKSDGQASQPTQVHTTNTEENKLESINSETM
QVYKEKPSQSLLHQGDIQETTLNLAIGIDTSNITESQEMQQSSHINKPQRIACQYGRSCY
RKNPIHFQQFSHPGDSDYHDSEAVTHVDDDRPECPYGTACYRKNPQHKLEYKHTAPPESE
RRQTRSKVTRKVTSVLADESDDDGEPNEYNLNDSFIDDEEEEEEYDPTDEDSDWEPDCQD
NDGEDTDMLLKEAQNFVKTKN
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgtttctttcaaaaggcagcgagttattggttacaccggaacggcatgcttca
gttcagcagataggaggggtatacgcaaaacgggacggacggtacgttgctgttttttct
tcccccttgtggaatcttacttccaaggggaaatgcgagaggcctgttgccatgtctggg
tttcatttagtgccattggacgggggttgccctttgccactgccactcggggagacagtg
ataggaagaggctcttttttgggagttacagataaaaaagtttccaggaagcatgctatt
ctgaaaatagttggtgaccagcttagcatcaaaccggtccatgtgaacccttgtttttac
tggcctgttgaagatgaccaactatttccactggataaagataagtggcatcagttgtgt
ccaggtgacagtttttctctgttagtagacaaatacattttcaaggttctgcgtacttca
ctggaaaaggaaagcctgctaagggaaaatggtaatctctgtgtagaagacctaccagat
caaatccccacaactctgcagtcaaccatgacgtctcacagtcagccttcagaacaatca
acaatcccttctaacaaaaaacagcttccagaagtacattcacttatggaaaacgcaacc
gaaatcccagagaagtttactcttcctaaaaaagaagaatcaaggcctgctcagcgaaaa
agacagcttccagaatggatgctgccaacagatctaatggcttcaactcagtcaacctct
aaaactggtaataatgaagaaataaagccagatctaagaaaaaagcagaaaattcttgaa
agtgaagattccacccttctaaaagaggaggtatttactaaagatgttgcaaagaaaatg
ccaaagattggaagtaaaagaatatctcagaaagctgaaagttcagttgagcaatttaac
agtcagctggataatgaagagctggatctcaagtcagatggacaagcatctcagcctact
caagtgcatacaacaaatacagaagaaaacaaattggagagcattaattctgaaaccatg
caggtttataaggagaagccatcacaatcattactccatcagggtgatattcaagagact
actctgaatctggctattggaatagatacttcaaatataacggaaagtcaagagatgcaa
cagagttctcacataaacaaacctcagaggattgcttgccaatatgggagaagctgctac
agaaagaatcctatacatttccagcagtttagtcaccctggtgacagtgattatcatgat
tcagaagctgtaactcatgttgatgatgataggcctgaatgtccttatggaacagcttgt
tacagaaaaaatccacagcacaagttggaatataaacacacagctcctccagaatctgaa
agaaggcagacaagatcaaaagttacaagaaaagtaacaagtgttcttgcggatgagagt
gatgatgatggtgaaccaaatgaatacaacttgaatgacagttttatagatgatgaagag
gaggaagaagagtatgatcctactgatgaagattctgactgggaaccagattgtcaagac
aatgacggtgaagatacggacatgcttctcaaagaagcacagaattttgttaaaactaag
aactaa
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