Protobothrops mucrosquamatus (Taiwan habu): 107291539
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Entry
107291539 CDS
T05763
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107291539 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107291539 (CLP1)
Enzymes [BR:
pmur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
107291539 (CLP1)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
107291539 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
ATP_bind_1
AAA_18
TniB
AAA_22
AAA_16
CbiA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
107291539
NCBI-ProteinID:
XP_029140789
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MAEETADEKKLVAKFELERETELRFEVEASQTVQLELMTGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHSCSVQLTGRTEVAYISKDTPMLLYLNTHTALEQMRWQAEREDERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSISIPGTMGALYIERPADVEEGFSV
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASISGCIINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRREFRDDR
IREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTADGTDENISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagactgcagatgaaaagaaactggttgccaagtttgagctggagagagag
actgaactccgctttgaagttgaggcctcacaaactgtccagctagaacttatgacaggc
atggctgaaatctttggaactgagctgacacgaaacaagaaattcacctttgatgctggt
gctaaagttgctgtatttacctggcatagttgttctgtgcaactaactggtcggactgaa
gtagcttatatctccaaagatacgcccatgcttctctacctcaacactcacacagctctg
gagcaaatgcggtggcaggctgagcgtgaagatgagcggggacctcgggtgatggtggtg
ggccccacagatgtaggcaagtcaacggtctgccgcctgctattgaattatgctgtgcgt
cttggacgccgacccacatttgtggaactggatgtaggccaaggctcaatttcaatccca
ggcactatgggagcactctatattgaacgacctgcagatgttgaagaaggattctctgtt
caagcccccctggtttatcattttgggtctaccacacctggcacaaatatcaagctctat
aacaaaatcacatctcgcttggctgatgtgtttaatcagcgctgtgaagtgaaccgcaga
gcttcaatcagtggctgtatcatcaatacgtgtggctgggtaaagggatctggatatcag
gcacttgtacatgctgcttctgcttttgaagttgatgttgttgtagtgttggatcaagaa
cgcctctacaatgaattgaaacgcgatctgcctcactttgttcgaactgtgctacttccc
aaatcaggtggagtggtagagcgctctaaagatttccggcgggagttccgtgatgaccgc
atacgtgaatacttctatggcttccgagggtgcttctatccacatgcttttgatgtcaag
ttctctgatgttaagatatataaagtgggagcgcccactatccctgactcatgtctgcct
ttgggcatgtcacaggaagacaatcaactcaagctagtcccagttacacccggccgtgac
atggttcatcatctattaagcgttagcactgcagatggcactgatgagaacatctctgag
accagtgtggctggtttcattgtggtaactggagtagatctggaacgccaagtgttcaca
gtgctttcaccagcaccacgcccgttgccaaagaatttcctgctcatcatggacattcgt
ttcatggatctcaagtag
DBGET
integrated database retrieval system
