Protobothrops mucrosquamatus (Taiwan habu): 107296179
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Entry
107296179 CDS
T05763
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain
KO
K06238
collagen type VI alpha
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04510
Focal adhesion
pmur04512
ECM-receptor interaction
pmur04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107296179 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107296179 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107296179 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmur04147
]
107296179 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
pmur00536
]
107296179 (COL6A2)
Exosome [BR:
pmur04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107296179 (COL6A2)
Glycosaminoglycan binding proteins [BR:
pmur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107296179 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
107296179 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
107296179
NCBI-ProteinID:
XP_015681015
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
MFSQAFLAVLLCMTVVPLYAQNDEGTSCADKTECPITVYFVIDTSESIALQTDPIESLVN
HSKKFVAQFVNKLANEVYQQQISINWQIGGLHFSDIVVIFSPITQDKVIFNDRLEKIRYI
GRGTFTDCALSNMTAQMPLNSLGANYAVVITDGHVTGNPCGGMKHQADRARDAGIKLFAV
APSQKIYEQGLQEIASLPHELFRNNYATLKKGSVDEDTETMDKIIQVMKHDAFAKCYKMS
CLEIQGPRGPKGFQGQKGAKGNMGISGFPGQKGRQGDPGIEGPIGHPGPKGIPGLKGEKG
EFGADGRKGASGIAGRNGTVGQKGKMGRIGPPGCKGDSGERGPDGYPGNPGDQGPPGDEG
IKGDPGWPGKHGPPGPIGEPGSSGPKGYKGEPGLPGLKGSPGTKGLGGPKGEAGRRGDPG
DIGKPGNQGSKGGKGDPGSEGQRGLPGEVGEKGRNGDQGPPGQRGPPGPLGEKGNPGSAG
DPGREGERGDMGPKGPKGDRGRPGLSVPGPRGPRGDKGEKGQPGPEGARGDLAPKGLKGK
KGEPGDDGHVGLPGPPGPRGSDGESGPEGDPGPPGDPGLTDCDVMTYIRETCGCCDCEKR
CGPLDIVFVIDSSESIGYTNFSLEKNFVINVVSRLGSIAKDPKSETGARVGVVQYSHKGT
FEAIQLNDKRIDSLSSFKEAVKKLEWIAGGTWTPSALQFAYETLIKESRRDKARVFAVVV
TDGRHDPRDKDSNLQALCDGNVVVNAIGIGDMFNVDEESETLKAIACNDEDRVQRMKVFT
DLVAEEFLDKIELELCPDPQIVCPELPCQTELSVAQCTQRPVDIVFLLDGSERIGSQNFR
RAHGFIEAVAEHLTLARSDSDDMNARIALLQYGNEDEHDIVFPLTYNITDITDRLAEIKY
LDSSSNIGSAIIYAVNNLVISTQDRQKAARRNAELSFVFFSDGITGNKNLEEATDSMKKQ
NVMPTVVALGSDVDMDVLLKISLGDRSAIFREKDYLSLSQPDFFDRFVKWIC
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgttctcacaagcctttttagctgttctgctctgcatgactgtggtccctctctatgct
caaaatgatgaaggaacttcctgtgcagataaaactgagtgtcccatcacggtgtacttt
gtcattgatacatctgagagcattgcccttcagactgaccctattgagagtttagtgaac
catagcaagaagtttgttgctcagtttgtcaataagctggccaatgaagtctaccaacaa
caaatttccataaattggcaaattggaggacttcatttttcagatatagtggtgatcttt
agtcctataacccaagacaaggtgatattcaatgatcggttggaaaaaatccgttacatt
ggtcggggcactttcacagattgtgctctctccaacatgacggctcagatgccgctcaat
tcgctgggggcgaattatgctgttgtgatcactgatggccacgtgacaggaaatccctgt
ggagggatgaaacatcaagctgatcgagcacgagatgcagggatcaagctctttgcggtg
gcccccagccagaaaatctatgagcaaggtctccaggaaattgctagccttccacatgag
cttttccggaacaattatgccaccctaaagaaaggcagtgttgatgaagatactgagacc
atggataagatcattcaagttatgaaacatgatgcctttgcaaagtgttataaaatgagc
tgccttgaaattcaaggtccgcgtggcccaaagggatttcaaggacaaaagggtgcgaaa
ggaaacatggggatttcaggctttcctggacaaaaaggacgtcaaggtgatccaggaatt
gaaggtccaattggacaccctggacctaagggtattcctggtctaaaaggagaaaaggga
gagtttggagcagatggacgaaagggagctagtggtattgctggaagaaatggcactgtt
ggacagaagggcaaaatggggcggattggacctcctggctgtaagggtgactcaggcgaa
aggggtcctgatggctacccaggaaaccctggtgatcaaggtccaccaggagatgaaggg
ataaagggagatcctggctggcctggcaaacatggaccacctggtcccattggagaaccc
ggaagctctggaccaaaaggatacaaaggagaacctggtcttcctggcctcaagggaagt
ccaggcaccaaaggacttgggggaccaaaaggagaagctggtcgtcgtggtgatcctgga
gacataggaaaacctggaaatcaaggatccaagggggggaaaggagatcctggttctgag
ggacaaaggggtctaccaggagaagttggagaaaaaggaagaaatggagatcaaggacca
ccaggccagcgtggtccaccaggtcctctgggcgaaaaaggaaaccctggctcagctgga
gatcctgggagggaaggtgaaaggggcgacatggggcctaaaggacccaagggtgatagg
ggaagacctggattaagtgttcctggtcccaggggaccccggggtgacaaaggtgaaaaa
ggtcagccaggcccagagggtgcaagaggtgaccttgctccaaaaggacttaaagggaaa
aaaggagagccgggcgatgatggacatgtcggccttccaggtccacctggacccagagga
tcagatggtgaatctggacccgagggtgaccctggtcctcctggagatcctggcctaact
gactgcgatgtgatgacctacatcagagagacctgtggctgctgtgattgtgagaagcgg
tgtggtccattggacattgtcttcgtcatagacagttcagagagtattggctataccaat
ttctccctggagaagaattttgttatcaatgtggtgagcaggctagggtccattgccaaa
gatccaaaatcagagacaggtgcccgtgttggagtggtacagtacagtcataagggcacc
tttgaagccatccagctcaatgataagcgcattgattcactctctagtttcaaagaagca
gtgaagaaactggaatggattgcagggggcacctggactccctctgcacttcagtttgcc
tacgaaacactcatcaaagaaagccggagagataaagcccgggtatttgctgtggtggtg
actgatggacgtcatgaccctcgagataaagactcaaatttgcaagccctctgtgatgga
aatgttgtggtcaatgccattgggattggagacatgttcaatgtagatgaagaatcggag
actctgaaagcaattgcttgtaatgacgaagatagagtccaaagaatgaaagtgttcact
gatttggtggctgaagagtttcttgacaaaatagagcttgaactctgtccagatcctcag
attgtctgccctgagctgccctgccaaacagagctttctgttgcccagtgcacacagcgt
ccagttgacattgtcttcctcctggatggttctgaaagaattggcagccagaactttcgt
agggctcatggttttatagaagcagtggctgagcatctcaccctggccagaagtgacagt
gacgacatgaatgcacgcattgccctgctacaatatggaaatgaggatgaacatgacata
gttttcccactgacatacaatattactgacatcacagatcgtttagctgagatcaaatat
ttggactcctcttccaacattggatctgccatcatatatgctgtcaacaaccttgtcatc
agcacacaagacaggcagaaggcagctcggcgtaatgcagagctctcctttgtcttcttt
tcagatggtattacaggcaacaaaaacctggaagaggcaactgattccatgaagaaacag
aatgttatgcccacagttgtggccctaggcagtgatgtggacatggatgtcctactgaag
atcagtctaggagatcggtcagcaattttccgggagaaggactacctaagtctctcccag
cccgacttttttgatagatttgttaagtggatctgttag
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