Pseudomonas muyukensis: KSS95_17675
Help
Entry
KSS95_17675 CDS
T07704
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pmuy
Pseudomonas muyukensis
Brite
KEGG Orthology (KO) [BR:
pmuy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmuy03016
]
KSS95_17675 (thpR)
Enzymes [BR:
pmuy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KSS95_17675 (thpR)
Transfer RNA biogenesis [BR:
pmuy03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KSS95_17675 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QXH33989
LinkDB
All DBs
Position
complement(4019034..4019579)
Genome browser
AA seq
181 aa
AA seq
DB search
MVQDARPSGAPFKRLFFALPVAAAQCRALAQWRRGLGLRSGKPVPAENFHVTLVFLGDVD
AAQVPAICAAVERVSRPQGPLRVVLDRLQVWPRADALVLEPEQAPVALRQLVYALHQTLL
PLGIEAPTREYRPHLTLSRDFRGQLPEAGEAPAFFLAARHFTLYESRKGRYWPLAEWPLA
H
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggtccaggatgcacgcccaagcggggcgcccttcaagcgcctgttcttcgccctgccg
gtcgccgctgcgcagtgccgggccctggcgcaatggcgccgaggcctgggcctgcgcagc
ggcaagccggtgccggccgagaacttccacgtgaccctggtgtttttgggcgatgtcgac
gcggcccaggtgccggcgatctgcgctgcggtcgaacgggtgagccgcccgcaggggccg
ttgcgcgtggtgctggaccgcttgcaggtgtggccgcgtgccgacgcgctggtgctggag
cccgagcaggcgcccgtcgccttgcgccagctggtttatgccctgcaccagacgctgttg
ccgctgggaatcgaggcgccgacccgcgagtaccggcctcacctgaccctgtcgcgggat
tttcgcgggcagttgccggaagccggtgaagcaccggcgtttttcctggcggcgcggcac
ttcaccttgtacgagtcgcgcaagggacgctattggcccttggccgagtggcccctggcg
cattag
DBGET
integrated database retrieval system
