Paenibacillus mucilaginosus K02: B2K_29790
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Entry
B2K_29790 CDS
T02041
Name
(GenBank) nitrogen fixation protein NifU
KO
K03092
RNA polymerase sigma-54 factor
Organism
pmw
Paenibacillus mucilaginosus K02
Pathway
pmw02020
Two-component system
pmw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B2K_29790
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B2K_29790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmw03021
]
B2K_29790
Transcription machinery [BR:
pmw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B2K_29790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
MarR_2
HTH_23
HTH_IclR
Sigma70_r4
HTH_11
HTH_29
HTH_38
Sigma70_r4_2
HTH_Crp_2
HTH_Tnp_ISL3
HTH_20
HTH_Tnp_4
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
AFH64844
UniProt:
I0BR47
LinkDB
All DBs
Position
complement(7038678..7039985)
Genome browser
AA seq
435 aa
AA seq
DB search
MRPGIGLTQALSTKTLLTAELHQSLHLLQLPAQELIRYAEEQALDNPLLELDLYGSRLRK
QGRGRPDGGGTDPLQWVPAGEETLERQLLGQLRTAGLPPAVYKAAAYLAGNLDERGYLTL
LPEEAAAELQLPEGVVTQALEVLQSLEPAGVGARTLQECLLLQIARDPAAQPWALQAVRD
SWPQLCQGRPERVAVGLGITREEAAGALAYIRRLDPRPGSSCGPVERAYVVPDAEVFLQQ
GELVVRMNPDALPAAAFRPEYEAQLRQAGCPRTAAFLQGKRSQAQSLVYGLQQRRVTLLR
VIRAIFEEQEAFLAKGWAAVHPLTLKQIAQRLDLHESTVSRAVQHKYVRTPYGVRELKAW
FTSGVRTADGETASSAAVKTRIREWIAGEDKRRPYSDQKLAELLAADGLAVSRRTVAKYR
EELHLLSSALRKTIM
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
gtgagaccaggcatcgggctgacccaggccctcagcaccaagaccctgctgaccgccgag
cttcatcaatcgcttcacctgctgcagcttccggcccaggagctgatccgctatgcggag
gagcaggcgctggacaatccgctcctcgagcttgatctgtacggaagccggctgcggaag
cagggccgcgggcgtccggacggaggagggaccgacccgctgcagtgggtcccggccggg
gaagagacgctggagcggcagctgctgggccagctgcggaccgccggcctgccgcccgcc
gtgtacaaggccgctgcctacctggccggcaatctcgacgaacgcggctatctgacgctg
ctgcccgaagaagccgcggccgagctgcagctgccggagggcgtcgtgacgcaggccctg
gaggtgctgcagtcgctcgagcctgcgggcgtcggcgcccgcacgctgcaggagtgcctg
ctgctgcagatcgcccgggacccggctgcgcagccctgggcccttcaggccgtgcgcgac
agctggccgcagctctgccagggccgcccggagcgggtcgcggtggggctcggcatcacc
cgggaggaggcggcgggggctctcgcctatatccggcggctggacccgcggcccgggtcc
tcctgcggccctgtggagcgggcgtacgtggtgccggatgcggaggtcttcctgcagcag
ggggagctcgtcgtccggatgaatccggacgcgctgccggctgccgcgttccggccggag
tacgaagcgcagctgcggcaggccggctgcccgcggacggcggccttcctccagggcaag
cggagccaggcgcagagcctggtgtacggtctgcagcagcgcagggttaccctgctgcgg
gtcattcgtgctatatttgaagaacaggaggcttttctggcgaagggctgggccgcggtt
catcccctgaccctgaagcagattgcgcagaggctggaccttcacgagtctacagtctcc
cgcgcggtgcagcacaaatatgtgcggacaccctacggcgtgcgcgagctcaaggcctgg
ttcacgtccggcgtgcggacggcggacggagagacggcctcctcggcggcggtgaagacg
cggatccgggagtggatcgccggggaagacaagcggcggccgtactccgaccagaagctg
gcggagctgctggccgcggatgggctggcggtctcgcggaggaccgtggccaagtaccgc
gaagagctgcacctgctctcctccgcactccgcaaaactatcatgtaa
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