Pseudomonas mendocina ymp: Pmen_2928
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Entry
Pmen_2928 CDS
T00510
Name
(GenBank) glutamate dehydrogenase (NAD)
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
pmy
Pseudomonas mendocina ymp
Pathway
pmy00220
Arginine biosynthesis
pmy00250
Alanine, aspartate and glutamate metabolism
pmy00430
Taurine and hypotaurine metabolism
pmy00910
Nitrogen metabolism
pmy01100
Metabolic pathways
pmy01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
Pmen_2928
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Pmen_2928
00220 Arginine biosynthesis
Pmen_2928
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
Pmen_2928
Enzymes [BR:
pmy01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
Pmen_2928
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_ACT3
GDH_HM3
GDH_HM1
GDH_HM2
ELFV_dehydrog
TetR_C_31
Motif
Other DBs
NCBI-ProteinID:
ABP85683
UniProt:
A4XWG7
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All DBs
Position
complement(3238916..3243757)
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AA seq
1613 aa
AA seq
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MAFFTAASKADFQHQLQAALAQHVSEQALPQMALFAEQFFGIIALEELTQRRLSDLVGCT
LSAWRMLERFDHGSPQVRAFNPDYEKHGWQSTHTAVEILHGDIPFLVDSVRMELNRRGYS
IHTLQNSVFSVRRDANGELLEILPRGTQGEGVLQEALMFLEIDRCSSSAELKTLEKAIHE
VFGDVRMSVADFQPMKAKARELLAWLDRAKLKVDKAELEEIKVYLNWLLDNHFTFLGYEE
FTVAPSADGGTMVYDEKSLLGLSKRLRTGLTAEELHIEPEAVAYLREPQLLSFAKAAVPS
RVHRPAYPDFVSIRELDAKGNVVKECRFMGLYTSAVYAESVWNIPYIRRKVDVIKQRSGF
DSSAHLGKELAQVLEVLPRDDLFQTPVDDLFNTALAIVQIQERNKIRVFLRRDPYGRFCY
CLAYVPRDVYSTETRLKIQQVLMDRLQATDCEFWTFFSESVLARVQFILRVDPKNKTQID
PVRLEKEVIQACRSWKDDYASLMVESFGEAQGTNVLAEFPGGFPAGYRERFAPHSAVVDM
QHLLSLSNDKPLVMSFYQPLAQGDQQLHCKLYHADTPLPLSDVLPILENLGLRVLGEFPY
KLRRNDGREFWIHDFAFTYAEGLDVDIQQLNDTLQDAFIHIVGGDAENDAFNRLVLIAAM
PWRDVALLRAYARYLKQIRLGFDLSYIASTLINHADIAKELVRLFRTRFYLARKLTAEDL
EDKQQKLEQAILAALDNVAVLNEDRILRRYLDLIKATLRTNFFQADASGAAKSYFSFKLS
PRLIPEIPRPVPKFEIFVYSPRVEGVHLRFGDVARGGLRWSDREEDFRTEVLGLVKAQQV
KNAVIVPMGAKGGFVPRKMPVGGSRDEVMAEGIACYRIFISGLLDITDNLKEGEVVPPVN
VVRHDADDPYLVVAADKGTATFSDIANGIAAEYGFWLGDAFASGGSAGYDHKGMGITAKG
GWVSVQRHFRERGIDVQKDNVTVIGIGDMAGDVFGNGMLLSDKLQLVAAFNHMHIFIDPN
PDAAKSFAERKRLFDLPRSSWADYDSKLISEGGGIFLRSAKSITITPQMKARFDIAADKL
APTELLNALLKAPVDLLWNGGIGTYVKSSKESHADVGDKANDALRVDGRELRAKVVGEGG
NLGMTQLGRVEFGLHGGASNTDFIDNAGGVDCSDHEVNIKILLGEIVSGGDMTEKQRNKL
LAEMTDDVSELVLGNNYKQTQALSLAERRARERVGEYKRLMNALESAGKLDRALEFLPSD
EELNERATNGQGLTRPELSVLISYSKIDLKESLLKSLVPDDDYLAREMETAFPEILTEKF
GDAMRRHRLKREIVSTQIANDLVNHMGITFVQRLKESTGMSAANVAGAYVIVRDLFRLPH
WWAQIEALDYKVPAELQLQLMDELMRLGRRATRWFLRSRRNELDAARDVAHFAPRIEALV
GRLDELLEGPAREQWLARYQSFVEAGTPEELARVVAGTSHLYTLLPIIEAADVTGKDASE
VATAYFAVGGALELSWYLQQITNLPVETNWQALAREAFRDDLDWQQRAITVSVLQMAEGP
QEIEARVALWLEQHHRLVERWKAMLTELRSATGTDYAMYAVANRELMDLAQSA
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctttacggcggccagcaaagccgacttccagcaccaactgcaagcggccctg
gcgcagcacgtgagtgagcaggcactgccacaaatggccctgttcgccgaacaattcttc
ggcatcatcgccctcgaagagctgacccagcggcgcctgtccgatctggtcggctgcacg
ctgtcggcctggcgcatgctggagcgtttcgatcacggctcgccgcaggttcgcgccttc
aaccccgactacgagaagcacggctggcagtccacccatacggcggtggaaattctgcat
ggcgatattccgttcctggtcgactcggtgcgcatggagctcaaccgtcgcggctacagc
attcacaccctgcagaacagcgtgttcagcgtgcgtcgtgacgcgaacggcgaactgctg
gaaatcctcccgcgcggtacccagggcgagggcgtgctgcaggaagcgctgatgttcctg
gagatcgatcgctgctccagctccgccgagctgaagaccctggaaaaagccattcacgaa
gtcttcggcgatgtgcgcatgagcgtcgccgacttccagccgatgaaggccaaggcgcgc
gagctgctggcctggctggatcgcgccaagctcaaggtggacaaggccgagctcgaggaa
atcaaggtctacctcaactggctgctggacaaccacttcactttcctcggttacgaggaa
ttcaccgtcgcgcccagcgccgacggcggcaccatggtctacgacgagaagtccctgctc
ggcctgtccaagcgcctgcgtaccggcctgaccgccgaggagctgcacatcgagccggag
gccgtggcctacctgcgcgagccgcagctgctgtccttcgccaaggcggcggtaccgagc
cgcgtgcaccgtccggcctacccggatttcgtctccatccgcgaactcgatgccaagggc
aacgtggtcaaggaatgccgcttcatgggcctgtacacctcggcggtgtacgccgagagc
gtgtggaacatcccctacattcgccgcaaggtggacgtgatcaagcagcgctcgggcttc
gacagcagcgcccacctgggcaaggaactggcccaggtgctggaagtgctgccgcgcgat
gacctgttccagaccccggtggacgacctgttcaacaccgcgctggccatcgtgcagatc
caggagcgcaacaagattcgcgtgttcctgcgccgcgatccctacggccgcttctgctac
tgcctggcctacgtgccgcgcgacgtctattccaccgaaacccgcctgaagatccagcag
gtgctgatggatcgtctgcaggccaccgattgcgagttctggaccttcttctccgagtcg
gtactggcgcgcgtgcagttcatcctgcgcgtcgacccgaagaacaagacccagatcgac
cccgtgcgcctggagaaggaagtcatccaggcctgccgttcgtggaaggacgactacgcc
agcctgatggtggagagcttcggcgaggcccagggcaccaatgtgctggccgagttcccc
ggcggtttcccggccggctaccgcgagcgtttcgccccgcattcggcggtggtggacatg
cagcacctgctcagcctgagcaacgacaaacctctggtgatgagcttctaccagccgctg
gcgcagggcgatcagcagctgcactgcaagctgtaccacgccgacacgccgctgccgctg
tccgacgtgctgccgattctggagaacctcggcctgcgtgtgctcggcgagttcccctac
aagctgcgccgcaatgacggccgcgaattctggattcacgacttcgccttcacctacgcc
gaaggcctggatgtcgacattcagcagctcaatgacacgctgcaggacgccttcatccat
atcgtcggtggcgatgccgagaacgatgccttcaaccgcctggtgctgatcgccgccatg
ccctggcgtgacgtcgctctgctgcgtgcctatgcgcgttatctcaagcagatccgcctg
ggcttcgacctcagctacatcgcctcgaccctgatcaatcacgccgatatcgccaaggag
ctggtgcgcctgttccgcacccgtttctacctcgcgcgcaagctcaccgccgaggatctg
gaagacaagcagcagaagctcgagcaggccatcctggctgcgctggacaacgtcgccgta
ctcaacgaagaccgcatcctgcgtcgctacctggacctgatcaaggcgaccctgcgtacc
aacttcttccaggccgatgccagcggcgcggccaagtcctatttcagcttcaagctcagc
ccgcgcctgatcccggagattccgcggccggtgccgaagttcgagatcttcgtctacagc
ccgcgcgtcgagggtgtgcacctgcgcttcggcgacgtcgcccgtggcggcctgcgctgg
tcggatcgcgaggaggatttccgtaccgaggtgctcggcctggtcaaggcgcagcaggtg
aagaacgcggtgatcgtgccgatgggcgccaagggcggcttcgtgccgcgcaagatgccg
gtcggcggttcgcgtgacgaggtgatggccgagggcatcgcctgctatcgcatcttcatc
agcggcctgctggatatcaccgacaacctcaaggaaggcgaggtggtgccgccggtcaat
gtggtacgccacgacgccgacgatccctacctggtggtggcggcggacaagggcaccgcg
accttctccgacatcgccaacggcatcgctgccgagtacggcttctggctcggcgacgcc
ttcgcctccggcggttcggccggttacgaccacaagggcatgggcatcaccgccaagggc
ggctgggtctcggtgcagcgccacttccgcgagcgcggcatcgacgtgcagaaggacaac
gtcaccgtgatcggcatcggcgacatggccggcgacgtgttcggcaacggcatgctgctg
tcggacaagctgcagctggtggccgccttcaaccacatgcacatcttcatcgatccgaac
ccggatgcggccaagagcttcgccgagcgcaagcgtctgttcgacctgccgcgttcgagc
tgggccgactacgacagcaagctgatctccgaaggcggcggcatcttcctgcgcagcgcc
aagagcatcaccatcaccccacagatgaaggcgcgcttcgacatcgccgccgacaagctg
gcgcccaccgagctgctcaatgcgctgctcaaggcaccggtcgacctgctgtggaacggc
ggtatcggtacctacgtcaagtcaagcaaggaaagccacgccgacgtcggcgacaaggcc
aacgacgcgctgcgcgtggacggtcgtgaactgcgcgccaaggtggtgggcgagggcggc
aacctgggcatgacccagctcggccgcgtcgagttcggcctgcatggcggcgccagcaac
accgacttcatcgacaacgccggcggtgtggactgctccgaccatgaagtgaacatcaag
attctgctgggcgagatcgtctcgggcggcgacatgaccgagaagcagcgcaacaagctg
ctggccgagatgaccgatgacgtgtccgagctggtgctgggcaacaactacaagcagacc
caggcgctgtcgctggccgaacgccgcgcccgcgagcgcgtcggcgagtacaagcgcctg
atgaacgcgctggagagcgccggcaagctcgaccgcgccctggagttcctgccctcggac
gaggagctgaacgagcgcgccaccaacggccagggcctgacccgcccggagctgtcggtg
ctgatctcctacagcaagatcgacctcaaggaatccttgctcaagtccctggtgccggac
gacgactacctggcgcgcgagatggaaaccgccttcccggaaatcctcaccgagaagttc
ggcgacgccatgcgccgtcaccgcctcaagcgcgagatcgtcagcacgcagatcgccaac
gacctggtcaaccacatgggcatcaccttcgtgcagcgcctgaaggagtccaccggcatg
agcgcggccaacgtcgccggcgcctacgtcatcgtgcgtgacctgttccgcctgccgcac
tggtgggcgcagatcgaggcgctggactacaaggtgccggccgagctgcagctgcagctg
atggacgagctgatgcgtctgggccgccgtgccacccgctggttcctgcgcagccgtcgc
aacgagctggacgccgcccgcgacgtggcgcacttcgcgccgcgcatcgaggcgctggtc
ggtcgtctggacgagctgctcgaaggcccggcccgcgaacagtggctggcgcgttaccag
agcttcgtcgaagccggcacgccggaagagctggcgcgtgtggtggccggcaccagccac
ctttacaccctgctgccgatcatcgaagcggcggatgtcaccggcaaggatgccagcgag
gtggccaccgcctacttcgccgtcggcggtgcgctggagctgtcctggtacctgcagcag
atcaccaacctgccggtggagaccaactggcaggcgctggcccgcgaagccttccgtgat
gatctggactggcagcagcgcgccatcaccgtctcggtattgcagatggccgagggtccg
caggagatcgaggcgcgcgtggcgctgtggctggagcagcaccaccgcctggtggagcgc
tggaaggcgatgctgaccgagctgcgctcggccaccggcaccgactacgccatgtacgcc
gtggccaaccgcgagctgatggatctggcgcagagcgcctga
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