Pirellulimonas nuda: Pla175_50800
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Entry
Pla175_50800 CDS
T06953
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pnd
Pirellulimonas nuda
Pathway
pnd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pla175_50800 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnd03019
]
Pla175_50800 (recQ_2)
03400 DNA repair and recombination proteins [BR:
pnd03400
]
Pla175_50800 (recQ_2)
Enzymes [BR:
pnd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pla175_50800 (recQ_2)
Messenger RNA biogenesis [BR:
pnd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Pla175_50800 (recQ_2)
DNA repair and recombination proteins [BR:
pnd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Pla175_50800 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
HTH_40
RecQ_Zn_bind
ResIII
Amidohydro_2
HTH_IclR
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
QDU91650
UniProt:
A0A518DJJ2
LinkDB
All DBs
Position
6448191..6450422
Genome browser
AA seq
743 aa
AA seq
DB search
MTSATQNGAAPTDHTQRLLPVLQEYWGYDSFRPLQAEAMGCVLSGRDSVVVLPTGGGKSL
CFQAPALAMEGLAVVVSPLISLMKDQVDALTAGGASAAFVNSTLSADERRDVAERVRSGE
VKLLYAAPERLLAARTLEFLQSVNVSLFAIDEAHCISSWGHDFRPEYRGLRTLKERFPGV
GIHAYTATASEQVRQDIAQQLGLQDPEFLVGSFDRPNLLYRVRHSQNRFGEVCDLVNARK
GDSGIVYCISRKEVDATAAALRELGVRAAPYHAGLSDSDRQRNQDRFLKEEIDVVVATVA
FGMGIDKSNVRYVIHAGMPKSLEAYQQESGRAGRDGLDSECTLLYQPRDAMTWRRLMASS
GENHDGALAALAGMEAYASGVVCRHRALVGYFGQDLGKDNCGACDICLAEVDLIDDPLVT
AQKIVSCVARLEERFGGDYTAKVLAGSREQRIVDQGHDRLSTHGLLEADGVKVIRGWIDQ
LMGQGYLEKAGEFGTLAITATGWSLLKGEASPRLARPAVKKAARRAASGGAELSPVDQGL
FEALRALRMQFARERGAPPYVIFGDAALQDMARQRPGSLEAFAEVKGVGQKKLDDFGDAF
VEAIVAYCSEQGLPVEVEGSAPAADAEGSPRRAGEPSASAPGVSASALAAFKHFRERSSM
EEVAKQMNRARSTVAGYLGEFLRHEQVTDPSPWVDPETARRVEAAIEEVGLKGLRPIYEQ
LGEEVDYESIKVVATCIANRQHS
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgacctcggccacgcagaacggcgccgcgccaaccgaccacacccagcgcctgctcccc
gtgctgcaggagtactggggctacgacagcttccgcccgctgcaggccgaggcgatgggg
tgcgtgctctcgggtcgcgactcggtggtggtgctgccgaccggcggcggcaagagcctc
tgtttccaggcgccggcgctggccatggaggggctcgcggtggtggtgtcgccgctgatc
tcgttgatgaaggaccaggtagacgcgctcacggccggcggcgcgtcggcggcgttcgtc
aacagcacgctcagcgccgatgaacgccgcgacgtggccgagcgggtccgttcgggcgag
gtcaagctgctgtacgccgcgcccgagcgtttgctagcggctcgcacgctggagttcttg
cagtcggtcaatgtttcgttgtttgcgatcgacgaggcgcactgcatcagcagttggggg
cacgacttccgcccggagtaccgcgggctgcggacgctcaaggagcgtttccccggcgtc
ggcatccacgcctacacggcgaccgccagcgagcaggtccgccaagacatcgcccagcag
ttggggctgcaggacccggagttcctcgtcggctcgttcgaccggccgaacctgctgtac
cgcgtacgccacagccaaaaccgcttcggcgaggtgtgcgatctggtcaacgcccgcaag
ggggactcggggatcgtgtactgcatcagccgcaaggaggtcgacgccaccgccgcggcg
ctgcgagagctgggggtccgcgcggcgccctatcacgcggggctctcggacagcgaccgg
caacgcaaccaagaccgcttcttgaaggaagagatcgacgtggtggtggccaccgtggcg
ttcggcatggggatcgacaagtcgaacgtgcggtacgtgatccacgccggcatgcccaag
agcctcgaggcctaccagcaagagagcggacgcgccgggcgcgacggcctcgactccgag
tgcacgctgctgtaccagccgcgcgacgcgatgacctggcggcggctgatggcctccagc
ggcgagaaccacgacggcgccctggcggcgctggcaggcatggaggcgtacgcctctggc
gtggtctgccggcaccgcgcgctcgtggggtacttcgggcaagacctgggcaaggacaac
tgcggcgcctgcgacatctgcctggcggaggtcgacctgatcgacgacccgctggtcacc
gcccagaagatcgtctcgtgcgtcgcccggctcgaagagcggttcgggggcgactacacc
gccaaggtgctggccggctcacgcgagcagcggatcgtcgaccaggggcacgaccggctc
agcacccacgggctgctcgaggcagacggggtgaaggtgatccgcggctggatcgatcag
ctcatgggccagggctacctggagaaggcgggcgagttcggcacgctggcgatcaccgcc
accggctggtcgctgctcaaaggagaagccagcccccggcttgcgcggccggccgtgaag
aaggccgccaggcgggccgcgtcggggggcgccgagttgtcgccggtcgaccaggggctg
ttcgaagcgctgcgggcgctccgcatgcagttcgcccgcgagcgcggggcgccgccgtac
gtgatcttcggagacgcggcgctgcaagacatggcccgccaacggccggggtcgctcgag
gcgtttgccgaggtcaaaggggtgggccaaaagaagctggacgacttcggcgacgcgttt
gtcgaggccatcgtggcctactgctctgagcaggggctgccggtggaagtcgaggggagc
gctccggcggctgacgccgagggctcgcctcggcgcgctggcgagccgtcggcgtcggcc
cccggagtcagcgccagcgcgctggccgcgttcaagcacttccgcgagaggagttcgatg
gaagaggtcgcgaagcagatgaaccgcgcccgctcaaccgtggccggctacctgggggag
ttcctccgccacgagcaggtgaccgacccctcgccgtgggtcgaccccgaaacggcccgc
cgggtggaggcggccatcgaggaggtcggcctcaaggggctcaggccgatctacgaacag
cttggcgaagaggtggactacgaatccatcaaggtcgtggcgacgtgcatcgccaaccgc
caacattcgtag
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