Pelagibacterium nitratireducens: V6617_01105
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Entry
V6617_01105 CDS
T11031
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf00020
Citrate cycle (TCA cycle)
pnf00270
Cysteine and methionine metabolism
pnf00566
Sulfoquinovose metabolism
pnf00620
Pyruvate metabolism
pnf00630
Glyoxylate and dicarboxylate metabolism
pnf00680
Methane metabolism
pnf00710
Carbon fixation by Calvin cycle
pnf00720
Other carbon fixation pathways
pnf01100
Metabolic pathways
pnf01110
Biosynthesis of secondary metabolites
pnf01120
Microbial metabolism in diverse environments
pnf01200
Carbon metabolism
Module
pnf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pnf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pnf_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
V6617_01105 (mdh)
00620 Pyruvate metabolism
V6617_01105 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
V6617_01105 (mdh)
00566 Sulfoquinovose metabolism
V6617_01105 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
V6617_01105 (mdh)
00720 Other carbon fixation pathways
V6617_01105 (mdh)
00680 Methane metabolism
V6617_01105 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
V6617_01105 (mdh)
Enzymes [BR:
pnf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 (S)-malate dehydrogenase (NAD+, oxaloacetate-forming)
V6617_01105 (mdh)
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GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
UDPG_MGDP_dh_N
3HCDH_N
ThiF
Motif
Other DBs
NCBI-ProteinID:
WWT33104
UniProt:
A0ABZ2I184
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All DBs
Position
210559..211521
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AA seq
320 aa
AA seq
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MARKKIALIGAGQIGGTLAHLVALKELGDVMLFDIVDGVPQGKALDLAQSGPVEGYNSTL
KGTSEYKDIEGADVVIVTAGVPRKPGMSRDDLLEINLKVMEQVGAGISKYAPDAFVICIT
NPLDAMVWALQKFSGLPAEKVVGMAGVLDSARFRHFIADELNVSVQDVTAFVMGGHGDTM
VPLARYSTVAGIPLPDMVKMGWMSKDKLDEIIQRTRDGGAEIVGLLKTGSAFYAPAASAV
EMAECYLKDKKRILPCAAHLTGQFGLSDTYVGVPVVIGAGGVERVVEIELNASEKKMFDA
SVASVDGLVEACKKIAPKLA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtaagaaaatcgctctgatcggtgccggtcagatcggggggacactcgcacat
ctggtggcgctcaaggaacttggcgacgtcatgctgttcgatatcgttgacggcgtgccc
cagggcaaggcgctcgatctggcccagtcgggtccggtcgaaggatacaattccaccctc
aagggcacgtccgaatacaaggacatcgagggcgccgatgtggtcatcgtcaccgccggc
gtgccgcgcaagccgggcatgagccgcgacgaccttctggaaatcaatttgaaagtcatg
gagcaggtcggcgcgggcatttccaaatacgcccccgacgcgttcgtgatctgcatcacc
aacccgctcgacgccatggtctgggcgctgcagaaattctccggccttccggccgaaaag
gtggtcggcatggcgggcgtgctcgacagcgcgcgcttccgtcacttcatcgccgatgag
ctcaatgtgtccgtgcaggatgttacagcgttcgtgatgggcgggcatggggacaccatg
gtgccgctggcgcgctattcgacggttgccggcattccgctccccgacatggtcaagatg
ggctggatgagcaaggacaagctcgacgaaatcatccagcgcacccgcgatggcggcgcc
gagatcgttgggttgctgaaaaccggttcggccttttatgcccccgccgcgtcggccgtc
gagatggccgaatgttatctcaaggacaaaaagcgcatcctgccctgcgccgcgcatctg
accggccagttcggcctgtccgatacctatgtcggcgttccggtggtgatcggggcgggc
ggtgtcgagcgggtggtcgagatcgaactcaacgcttctgaaaagaagatgttcgacgcc
tctgtcgcttcggtcgacgggcttgtcgaagcctgcaagaagatcgcgccgaaactggcg
taa
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