KEGG   Pelagibacterium nitratireducens: V6617_01105
Entry
V6617_01105       CDS       T11031                                 
Symbol
mdh
Name
(GenBank) malate dehydrogenase
  KO
K00024  malate dehydrogenase [EC:1.1.1.37]
Organism
pnf  Pelagibacterium nitratireducens
Pathway
pnf00020  Citrate cycle (TCA cycle)
pnf00270  Cysteine and methionine metabolism
pnf00566  Sulfoquinovose metabolism
pnf00620  Pyruvate metabolism
pnf00630  Glyoxylate and dicarboxylate metabolism
pnf00680  Methane metabolism
pnf00710  Carbon fixation by Calvin cycle
pnf00720  Other carbon fixation pathways
pnf01100  Metabolic pathways
pnf01110  Biosynthesis of secondary metabolites
pnf01120  Microbial metabolism in diverse environments
pnf01200  Carbon metabolism
Module
pnf_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pnf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pnf_M00012  Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:pnf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    V6617_01105 (mdh)
   00620 Pyruvate metabolism
    V6617_01105 (mdh)
   00630 Glyoxylate and dicarboxylate metabolism
    V6617_01105 (mdh)
   00566 Sulfoquinovose metabolism
    V6617_01105 (mdh)
  09102 Energy metabolism
   00710 Carbon fixation by Calvin cycle
    V6617_01105 (mdh)
   00720 Other carbon fixation pathways
    V6617_01105 (mdh)
   00680 Methane metabolism
    V6617_01105 (mdh)
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    V6617_01105 (mdh)
Enzymes [BR:pnf01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.37  (S)-malate dehydrogenase (NAD+, oxaloacetate-forming)
     V6617_01105 (mdh)
SSDB
Motif
Pfam: Ldh_1_N Ldh_1_C Glyco_hydro_4 UDPG_MGDP_dh_N 3HCDH_N ThiF
Other DBs
NCBI-ProteinID: WWT33104
UniProt: A0ABZ2I184
LinkDB
Position
210559..211521
AA seq 320 aa
MARKKIALIGAGQIGGTLAHLVALKELGDVMLFDIVDGVPQGKALDLAQSGPVEGYNSTL
KGTSEYKDIEGADVVIVTAGVPRKPGMSRDDLLEINLKVMEQVGAGISKYAPDAFVICIT
NPLDAMVWALQKFSGLPAEKVVGMAGVLDSARFRHFIADELNVSVQDVTAFVMGGHGDTM
VPLARYSTVAGIPLPDMVKMGWMSKDKLDEIIQRTRDGGAEIVGLLKTGSAFYAPAASAV
EMAECYLKDKKRILPCAAHLTGQFGLSDTYVGVPVVIGAGGVERVVEIELNASEKKMFDA
SVASVDGLVEACKKIAPKLA
NT seq 963 nt   +upstreamnt  +downstreamnt
atggcgcgtaagaaaatcgctctgatcggtgccggtcagatcggggggacactcgcacat
ctggtggcgctcaaggaacttggcgacgtcatgctgttcgatatcgttgacggcgtgccc
cagggcaaggcgctcgatctggcccagtcgggtccggtcgaaggatacaattccaccctc
aagggcacgtccgaatacaaggacatcgagggcgccgatgtggtcatcgtcaccgccggc
gtgccgcgcaagccgggcatgagccgcgacgaccttctggaaatcaatttgaaagtcatg
gagcaggtcggcgcgggcatttccaaatacgcccccgacgcgttcgtgatctgcatcacc
aacccgctcgacgccatggtctgggcgctgcagaaattctccggccttccggccgaaaag
gtggtcggcatggcgggcgtgctcgacagcgcgcgcttccgtcacttcatcgccgatgag
ctcaatgtgtccgtgcaggatgttacagcgttcgtgatgggcgggcatggggacaccatg
gtgccgctggcgcgctattcgacggttgccggcattccgctccccgacatggtcaagatg
ggctggatgagcaaggacaagctcgacgaaatcatccagcgcacccgcgatggcggcgcc
gagatcgttgggttgctgaaaaccggttcggccttttatgcccccgccgcgtcggccgtc
gagatggccgaatgttatctcaaggacaaaaagcgcatcctgccctgcgccgcgcatctg
accggccagttcggcctgtccgatacctatgtcggcgttccggtggtgatcggggcgggc
ggtgtcgagcgggtggtcgagatcgaactcaacgcttctgaaaagaagatgttcgacgcc
tctgtcgcttcggtcgacgggcttgtcgaagcctgcaagaagatcgcgccgaaactggcg
taa

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