Halopseudomonas nanhaiensis: KEM63_13405
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Entry
KEM63_13405 CDS
T07673
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pnn
Halopseudomonas nanhaiensis
Pathway
pnn02024
Quorum sensing
pnn03060
Protein export
pnn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pnn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
KEM63_13405 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KEM63_13405 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KEM63_13405 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pnn02044
]
KEM63_13405 (ffh)
Enzymes [BR:
pnn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
KEM63_13405 (ffh)
Secretion system [BR:
pnn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
KEM63_13405 (ffh)
Eukaryotic Sec-SRP protein
KEM63_13405 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
cobW
APS_kinase
AAA_16
AAA_33
YqeC
AAA_31
AAA_14
AAA_30
ABC_tran
KTI12
AAA_26
Thymidylate_kin
AAA_24
T2SSE
NACHT
DO-GTPase1
TrwB_AAD_bind
ArsA_ATPase
TsaE
ParA
SLFN-g3_helicase
DnaB_C
AAA_28
AAA_19
nSTAND3
NTPase_1
Rad17
ResIII
VirC1
ATPase_2
AAA_17
Motif
Other DBs
NCBI-ProteinID:
UAW97784
LinkDB
All DBs
Position
complement(2963470..2964870)
Genome browser
AA seq
466 aa
AA seq
DB search
MFENLTDRLSHSLRGVTGRAKLTDENIKDTLREVRMALLEADVALPVVKSFVDQVRERAV
GQEVSRSLSPGQAFVKIIRAELEAVMGETVGLNLAVSPPAVILMAGLQGAGKTTSVAKLA
KTLRERQKKKVMVVSADVYRPAAIKQLETLAKEVDVSFFPSDAGQKPVAIVEAALREAKN
RFMDVLIVDTAGRLHIDADMMDEIRAVHAAAKPAETLFVVDAMTGQDAATTAQAFNEALP
LTGVILTKVDGDARGGAALSVRHITGKPIKFLGMGEKTDALEVFHPDRVASRILGMGDVL
SLIEQAEQKLDKDKAEKLAKKLKKGKGFDLEDFRDQLQQMRGMGGLGSLMDKLPMMGKIS
PSQMETAQTQAEKQFKQMEAIINSMTPGERRNPDIISGSRKRRIAAGSGTQIQDIGRVIK
QHKQMQKMMKKVSGKGGMAKLMRGMGGLGGGGGGGMMPPGGGMPKF
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatcttaccgatcgcctgtcgcacagcctgcgcggcgtcaccggccgggcc
aagctgactgacgagaacatcaaggacaccctgcgcgaagtgcgcatggcgctgcttgag
gcggatgttgcgctgccggtggtcaagagcttcgttgaccaggtacgcgagcgcgccgtg
ggtcaggaggtgtcgcgcagtctgtccccaggccaggccttcgtgaagatcattcgcgcc
gagctggaagcggtgatgggcgagactgtcgggctcaacctggcagtatcgccgcctgcg
gtcatcctgatggccggtctgcagggtgcaggtaagacgacgtccgttgccaagctggcc
aagacgttgcgagagcgccagaagaaaaaggtgatggtagtcagcgccgacgtctatcgt
ccggcagcgatcaagcagctcgagaccctggccaaggaagtcgacgtttccttcttcccg
tcggatgccgggcagaagccggtggcgattgtcgaagcggcgctgcgtgaggcgaagaac
cgcttcatggacgtgctcatcgtcgataccgcaggccgcctgcatatcgacgccgacatg
atggacgagattcgcgcggtgcatgccgcggcgaagccggccgaaacgctcttcgtggtc
gacgcgatgaccggtcaggacgctgcaacgacggcgcaggcgttcaacgaggccctgccg
ctcaccggcgtgatcctgaccaaggtcgatggcgacgcacgcggcggtgctgcgttgtcc
gtgcgacacatcactggcaagccgatcaagttcctcggcatgggcgagaagaccgacgcg
ctggaggtgttccatccggatcgtgttgcttcgcgcatcctgggcatgggcgatgtgctc
agcctgatcgagcaggccgaacagaagctcgacaaggacaaggctgaaaagctggccaag
aagctcaagaagggcaagggctttgacctcgaggacttccgtgaccagctgcagcagatg
cgcggcatgggcggtcttggttcgctgatggacaagctgccgatgatgggcaagatcagc
ccctcccagatggaaacggcgcagacccaggcggaaaagcagttcaagcagatggaggcc
atcatcaactcgatgacccccggcgagcggcgtaaccctgatatcatcagcggctcgcgc
aagcgccggatcgccgccggatcgggtacccagatccaggatatcggccgtgtcatcaag
cagcacaagcagatgcagaagatgatgaagaaggtcagtggcaagggtggcatggccaag
ctgatgcgcggcatgggcggccttggcggtggcggcggtggcggaatgatgccgccgggc
ggcggtatgccgaagttctga
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